Micropterus salmoides (largemouth bass): 119901115
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Entry
119901115 CDS
T07309
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119901115 (chd1l)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119901115 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
AAA_34
IBB
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
119901115
NCBI-ProteinID:
XP_038572528
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MTEILLKIKNSVAEKKKTAVAQSDLQKLGLRGIQLRPYQLDGVQWLTQCLKNQQGCILGD
EMGLGKTCQTISLLVYMSGALGRKGPFLVLSPLSVMENWRRELECFAPSLTVLCYKGDKE
RRAELQRETNTQDVHVLLTTYELCLKDASFLRRWNWKVLVVDEAHRLKNQNSLLHKTLTQ
FSVGFRVLLTGTPIQNNLQELYSLLSFIQPSIFTADETDDFVNSYSDVQSQPALAAELQS
VLEPFLLRRVKSEVAVDLPKKTELVVYHGMSALQKKYYKAILMKDLEAFGNQQSNKNRLL
NILMNLRKCVDHPYLFDGVEPEPFEIGEHLVEASGKLCLLESMLTYLHKGGHRILLFSQM
TRMLDILQDYMEYRGYSYERLDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTS
ADTVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLHLTNT
VIEEGRFSLLDQAHSAAAGLQLSEILKFGVDKLLSSDDSSVQDVKLEKILGPSCDGQWLD
DEDFTSLREEDEEEESSSECDRQNHMYCFEGKDYSKDPSSEDQKSFDRLLDEQLAEFQRA
AGEGRALRHKAGLSLSVALGIPTRKRKPLTEAELELRRQKREEAAAKRAKIQEDVKKKQQ
EQKYKKKMAWWESCGYRSLCLPSVDSEEEEEEDDSSVCSTDSDSTAIHYVLGDVTHPHAA
QKDAIIVHCVDDSGRWGRGGLFTALEVRSDEPRKKYELAGKMKDLDLGNVLLFPIDDKQS
RLDGQDQLALIVAQQRDKANNLSGILLTALDEGLKKIYTAAKRNKASVHLPRIGHSTKGF
NWYGTERLIRKHLASRGIPTFIYYHSRTAKNTAPPQASTSTTLMSTSSPEPQLRNSNRLT
DETEAESLSLSAPHQSPGPAELPSFMRGVRVFFYNLPASERKRLARYLITYDGDEEEIMS
PEVTHIVAEVESSLHSQELQDLVREYTQAVPVQKAWLESCFSKQQKVNTALFLHLF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaattttgttgaaaataaaaaacagcgtagcggaaaagaagaagacggccgta
gctcagagcgacttgcagaagttgggtttaagagggatacagctgagaccttaccagctg
gatggcgtgcagtggttaacccagtgcctgaagaaccagcagggatgcattttaggagat
gagatgggtctgggaaaaacctgtcagacgatctctctgctggtgtacatgtcaggagct
ctcggcaggaaaggtccattcttggtgctgagtcctctttctgtcatggagaactggcgg
agggagttggaatgcttcgccccatctctgactgtgctgtgttacaagggggacaaagag
agacgggctgaacttcagagggaaacaaacacacaggatgttcatgttctgctcactaca
tatgagctgtgtctcaaagatgcttcattcttgagacggtggaactggaaggtgcttgtg
gtagacgaagctcacagactgaagaaccagaattcactattgcacaaaaccttgacacag
ttctcagttggtttcagagtcctgctgacagggactcccatccagaacaacctacaggag
ctctactccctgctgagcttcattcagcccagcatctttacagctgatgagacggacgac
ttcgtcaactcttactctgatgtacaaagtcaacctgctcttgctgctgagctgcaaagt
gtcctggagcccttcctcctgcgtagagtcaagtcagaagtagctgtggatctgccgaag
aagacggagttggtggtctaccacggcatgtctgctctgcagaaaaaatactacaaagcc
attctgatgaaggatctggaggcttttggaaatcagcaaagtaacaagaaccgactgctg
aacatcttgatgaacctgagaaagtgtgttgaccacccatacctgtttgatggagtggaa
ccggagccttttgagataggggagcatctcgttgaagccagtgggaaactttgccttttg
gaaagcatgctgacttaccttcacaaagggggacatcggatcctgttgttctctcagatg
acgaggatgctggacatacttcaggattacatggagtacagaggttatagctatgaacga
ctggatggatccgtccgaggggaagaacgaaatctagccgtgaagaacttcagcagcaaa
gatatctttgtctttcttctcagcactaaagcaggaggagtgggcttgaaccttacatct
gctgacacagtcatttttatggacagtgacttcaaccctcaaaatgacctgcaggctgct
gcacgctgccatcggattggtcagaacaggcctgtgaaagtgattcgcctactggcaaga
gacactgtggaggaaataatgtactctcgtgctgtgtccaagttgcaccttaccaacact
gttattgaagaaggacgcttctctttgttggaccaagctcattcagctgctgcaggactg
cagctaagtgagatcttgaagtttggggtagataagcttttgtcatccgacgacagctct
gtgcaggatgtgaaactggagaagatcctcggtccatcatgtgatggtcagtggctggat
gacgaagactttacctctctcagagaagaggatgaggaagaagagagcagctctgaatgt
gacaggcagaaccacatgtactgctttgaggggaaagactacagtaaggaccccagctct
gaagaccagaaaagctttgaccgtttgttagatgagcagctggctgagttccagagagct
gcaggggagggacgagctctacgacacaaagctggactttcactgtctgtagcccttggc
attccaacgaggaagaggaaacctcttactgaggctgagctggagctgaggcgccagaaa
agggaggaggctgcagccaagagagccaaaattcaggaggacgtgaagaagaagcaacaa
gagcagaaatataagaaaaaaatggcatggtgggagtcttgtggctacagatcactatgc
ctgccgtctgtggacagtgaagaagaagaagaagaagatgacagcagcgtgtgctccaca
gactctgacagcacggccatccactatgttctaggggatgttactcatcctcacgccgct
caaaaagacgctatcattgtccactgtgttgatgactcaggccggtggggcaggggaggc
ctgtttacggctctagaggtgagatcggatgaaccacgaaagaagtatgagttggctggc
aagatgaaagatttggaccttggaaacgtgctgctcttccccattgatgacaaacagtcc
agattagatggccaggatcaattggccctgatagtggcacagcaaagagacaaagcgaac
aacttgtctgggatccttctaactgctctggatgaaggtctgaagaagatttacactgca
gccaaaagaaataaggcaagcgtacatcttcctcgcataggtcactccaccaaaggcttc
aactggtatggcaccgagaggctcatcaggaaacacctggcttccagaggcatccccaca
ttcatatactatcacagcagaacagcaaagaacacagctccacctcaggcatccacttct
acgaccctaatgtcaacatcttctcctgagccgcagttgcgtaactcaaacaggttgact
gacgagacggaggcagaaagcctcagcctctcagctccccaccagagccctggccccgca
gagctacccagtttcatgaggggagtccgtgtgtttttctacaacctgcctgcatcagag
aggaagaggctggcccgctaccttattacttatgatggagatgaggaggagatcatgagt
ccggaggtcacccacatagttgcagaggtggagagcagcctccactcacaggagctccag
gatctggtgcgtgagtacactcaggctgtccctgtgcagaaggcctggctagagtcctgc
ttctccaaacaacagaaagtcaacactgcactgttcctacatctgttctga
DBGET
integrated database retrieval system
