Micropterus salmoides (largemouth bass): 119901175
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Entry
119901175 CDS
T07309
Symbol
sned1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119901175 (sned1)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119901175 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
SdrD_B
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
119901175
NCBI-ProteinID:
XP_038572631
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MVLVLRALLPCFCTLLSLDLLPGVEPAVPLEDFYPFGQDKGDSKTISQDDGGSRLVKISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQDPSILSRASGDVRTYFSEFPNFNATWVLISTWLQVTFFGGNSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSRTADIVN
VEGTTNVGYPGRWVFRIDDANVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVDECASYPCQNGGTCEDQINSFICQCPPGYTGIQCETDIDECKDSPC
LNNALCVQGAGNFTCVCEPGYTGVLCETDINECESQPCLNGGECVDQVNNFTCICAAAFT
GTLCETELLVLQDNSTEAENQTASCEEEDCKKHQICEYTSSGISNCTCAPGFYGDKCEEE
CLCQNGGVCVDSNGTCECPSGYTGLYCQFGVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQ
TSAAELDHKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYKCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCEISSSSAQPSAELGCGPPPQVKHAEVQFSSTTPGSMAVYICLSGFMSVPR
ATQSICGIQGDWSQPPICEEINECLSQPCLNGGTCQNHVGSYQCDCDDGFSGKRCQTDVN
ECLSDPCKHGGTCEDQAGSYLCHCPPGFKGQSCEIEQDGCDSNPCLNGGVCRGYRRNYVC
GCKDGFFGDQCQMLENPCVLQPCGNRGLCRSDRRGNYNCVCKTGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEPSHSLVSGFVVTYGPLGRSNRKSDVLDRQKSTHVMRGLVPGL
LYNISTFSIKRNTNSNDISQPATALIRTRPRQVEQLQVVNVSSSEVWLSWLVQAARHAAV
SRVHVSLLASDGSDSRTAVLNTSTTEHTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHSA
GPLQFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNWKL
GSYTLRELTPGQNYYVALTSVKNTGQEHIHSVPQHLAFTTLPMEARSGRRDWPTVTGQGI
PVGRTLPPSQPQVLGGTAETENSEELHRYTELIDRRGKITARFTHLPQKAIRLRTKPDPP
IKLEKMEETTNKISLALESQEEGLRMKPELPQDCRSLPCQNGGTCVNGGDSFICDCTAGF
KGRQCELLCQRVPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPMLPK
KSQKHLDTDERTVITVM
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcttctgcaccctgctctccctggacctg
ctgcctggggtggaacccgctgtgcccctagaggacttctacccctttggccaggacaag
ggggactccaagaccatcagtcaggacgacggaggctccaggctcgtgaagatctctgtt
gctttccccttctttggagataggcacacgggactctatgttaacaacaatggcctggta
tctttcctgagggaggtgtctcagttcacacctgtggcttttccaatcgctggggacaga
agggttgtggcaccgttctgggctgatgtggacaaccgtcgagcagggagagtcttctac
agagagagccaggacccttccatcctgagtagggcctcaggtgatgtcaggacgtacttt
tcagagttccccaacttcaacgcaacatgggtcctcatctctacatggcttcaagttact
ttctttggaggcaactccctcacaccggtaaatactttccaagtggtgcttattacagat
ggagagctttccttcactatattccagtacaataacatcacttggaccacaggcatgcat
gccagcagtggaggaaacctggctgggctgggagggatagcagcgcaggcaggtttcaat
gctggggatggcaagcgctatttcaacatccccggctctcgcacggccgacatagtgaac
gttgagggaaccactaacgtgggctacccaggcagatgggtcttccgtatagatgatgca
aatgtggaagtgggtggctgtaataactctgcatcagtgtgcccacacctgcgaccgtgt
ctgaacggaggccagtgcatcgatgactgtattacaggcaacccctccttcacttgctcc
tgcttggccggcttcaccggtcgacgatgccagatcgatgtcgatgagtgtgcctcatat
ccttgccagaacggagggacttgtgaagaccagattaatagtttcatctgtcagtgtcca
cctggatacaccgggattcagtgtgaaacagacattgacgagtgcaaagacagcccgtgc
ctcaacaacgcgttgtgtgtacaaggcgctggcaatttcacctgcgtgtgtgaaccgggc
tacactggtgtcttgtgtgagacagacataaacgaatgcgagtcacagccctgtctgaac
ggaggagaatgcgtcgatcaggtcaacaacttcacctgtatttgtgccgctgctttcact
ggaacgctctgcgagacagagctgttggtgcttcaggacaattcaactgaggcagaaaac
caaacagcctcatgtgaagaggaagattgcaagaagcaccagatttgcgaatacaccagc
tcaggaatctccaactgcacttgtgctccaggcttctatggtgacaagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacagcaatgggacttgtgaatgcccttca
ggctacacaggactctactgtcagtttggagtcactcagacgccgtgcagtaacagcagg
ccatgtcctgatgggggtccctgtttggagtatggaggaacctacctgtgcacatgtcag
actagtgcagcagagctagatcataaggacttttacccctatgtacagccccgatcggtc
tgcgactcctctccgtgtctgaatgggggctactgctacgagcgggacggaggctacacc
tgcgaatgcaaatatggatactgggggaagcactgtgaaaaagttagactcaatacctgt
gcttctggtccctgccgcaatggtggctcctgtaaggaagaggcagggagctataaatgt
gtgtgtccttacagattcactggaaaacactgtgaagtggggaagccagacccctgtgcc
tccagcccctgtctgaatggggggacatgttttcactacataggaaagtacaaatgtgaa
tgcaccgaggccttcagcggcagacactgtgaaataagcagcagctcagcacaaccctcc
gcagagctgggctgtgggccgcctccacaagtgaagcacgctgaggtccagttctcctca
acaacaccaggctccatggctgtgtatatatgcctctcaggcttcatgtctgtgcccaga
gccactcagagcatctgtggtattcagggagactggagccagccacccatttgtgaggag
atcaatgaatgcctgtcacagccttgccttaatggcgggacatgtcagaaccacgtcgga
tcctaccagtgtgactgtgatgatggcttcagtggaaagcgatgtcagacagacgtaaat
gaatgcctgtcggatccctgcaaacacggggggacatgtgaggaccaggccggctcctat
ttgtgtcattgtccaccgggcttcaaaggccagagctgtgaaatagagcaggacgggtgt
gactccaacccctgtctgaatggaggtgtgtgtcggggttacagacggaattatgtgtgc
ggatgcaaagacggtttctttggggaccagtgccagatgttggagaatccatgtgtactg
caaccttgtggaaaccgcggcctctgcaggagtgacaggagagggaactacaactgtgtt
tgcaaaacagggcacacaggcaaagactgtgagaaagacctgttacctccctctggtctc
catgttctgcgtgtggaggagaacgaggtggagctacgctgggatgagcctgagccctca
cacagcctggtcagcgggttcgttgtcacttatggtcccctgggccggagcaatcgcaaa
tcagacgtcctggacaggcagaagtccacccacgtcatgcgaggcctggtgcccggcctg
ctgtacaacatctccaccttctccatcaaacgcaacaccaacagcaacgacatcagccag
cctgccaccgcactaatacgcacccgacctcggcaggtggagcagctgcaggtggtcaat
gtgtcctcctctgaggtttggctgagctggctggttcaggcagctcgtcacgcagcagtc
agcagggtgcacgtgtctctgttggcttcagatgggagtgattctcgcactgctgtgctt
aacacgagcaccactgagcataccttcagttcattactccccggtcagatgtacacagtg
gatgtgttgactcaaagtggaatcagaccagatgagtttccctccaccagccactcagct
ggaccactgcaattctggacaaggcctcttcccccacagaacctgtccctgtcacatgtg
accactaactcagcactgatcacctggagccgccacccgagaaacgtcccagatggcttt
gtagtcaacgtgacccgagggttgaataccaggagtcgcttcctgccgaactggaaattg
ggatcatataccctgcgtgaactgacgccaggccagaactactatgtggctctcacatct
gttaaaaacacagggcaggaacacatccacagcgtacctcaacacttagccttcactacc
ttgccaatggaggcaagatcagggagaagagattggccaaccgtgactggacaggggatt
ccggtcggacgcacacttcccccatctcagcctcaggtcctgggaggcacagcagaaaca
gagaactcagaggaattgcacagatacacagaactcattgacagaaggggaaagataaca
gccaggttcactcacttgcctcaaaaagccattcgacttcgtactaaacctgacccacca
attaaattagagaagatggaagaaacaacgaataaaatcagccttgcactcgagagtcaa
gaagaaggtttaagaatgaagcctgagttgccacaggactgccgcagtctgccctgccag
aacgggggtacatgtgtaaacggaggcgactccttcatctgcgactgcacagcggggttc
aagggcagacagtgtgaactgttgtgccagcgagtgccacacccctgcacccgtctctac
tctgaaacgaagagtgtgcctgtctgggagggtggagtgtgccactacctgtacaaaagg
acatataaagtacagcaggatgtttgttatcgagagatttgcgaaccgatgcttcccaag
aaaagtcagaagcacttggatactgatgaaaggactgtcatcactgtcatgtga
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