Micropterus salmoides (largemouth bass): 119901257
Help
Entry
119901257 CDS
T07309
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03030
DNA replication
msam03410
Base excision repair
msam03420
Nucleotide excision repair
msam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119901257 (rfc4)
03410 Base excision repair
119901257 (rfc4)
03420 Nucleotide excision repair
119901257 (rfc4)
03430 Mismatch repair
119901257 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119901257 (rfc4)
03036 Chromosome and associated proteins [BR:
msam03036
]
119901257 (rfc4)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119901257 (rfc4)
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119901257 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
119901257 (rfc4)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119901257 (rfc4)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119901257 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
119901257 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_30
AAA_16
Gp44_lid
AAA_11
DUF815
Mg_chelatase
AAA_19
SLFN-g3_helicase
KH_DUF2096_C
RuvB_N
AAA_24
AAA_14
AAA_28
Cdc6_lid
AAA_5
ResIII
DNAX_ATPase_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
119901257
NCBI-ProteinID:
XP_038572776
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTSRPQKDKAAAGSSTEKKAKAIPWVEKYRPKCINEVAFQEEVVAVLKKS
VEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRTDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESIAALVKVSEGDLRKAITFL
QSAARLNVNKEITERTVIEIAGVIPPKMIDNLLQICFKGTFEKLEVAVRNMVDEGYAATQ
ILSQLHESIIEQDLSDKQKSAITEKMAVVGKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttttgaaaggagcaactgttcagacgtccagacctcaaaaagacaaggca
gcagcagggtccagtacagagaagaaagccaaggccataccttgggtagaaaaatacagg
ccgaagtgtattaatgaggtggcctttcaggaggaggtggtagcagtgctcaagaaatct
gtggaaggagcagatcttcccaacttgcttttctatggcccacctggaacaggaaagacc
tccaccatcctagctgctgccagagaactttatggtccagagctttacagacagagggtt
ctggagctcaatgcctctgatgaacgaggcatccaggtcatcagagagaaggtcaagaac
tttgctcagctcaccgtagctgggactcgcactgatgggaagccgtgtcccccttttaag
ataatcatcctggatgaagcggactccatgacggcaccagctcaggcggcactcaggcgg
accatggagaaggagtcccgcaccacccgcttctgtctcatctgtaactacatcagcagg
attattgagcccctgacctccagatgctccaagtttcgtttcaaacctctagcaaatcag
atccaagaagagcgcctgctggagatctgcgagaaggaaaacctcaagtataccaaagag
agtatagcagcgttggtgaaggtgtctgagggagacctgcggaaagccatcaccttcctg
cagagcgctgcgcgcctcaacgtcaacaaggagatcacagaacgcactgtgattgaaata
gctggggtcatccctcccaagatgattgacaacttgctccagatctgcttcaaaggaacg
tttgagaaactagaggttgccgtcaggaacatggtggatgaaggctatgcagccacacag
atcctgagtcagctccacgagtctatcatagagcaggacctgagtgacaagcagaagtca
gccatcacagagaagatggcagttgtgggcaaatgtctgtcagatggtgcagatgagtac
ctgcagatgttgagtctctgctcagttatcatgcagcaggcctcccagaacaactaa
DBGET
integrated database retrieval system