Micropterus salmoides (largemouth bass): 119901264
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Entry
119901264 CDS
T07309
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119901264 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119901264 (taf4b)
03036 Chromosome and associated proteins [BR:
msam03036
]
119901264 (taf4b)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119901264 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
119901264 (taf4b)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119901264 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119901264
NCBI-ProteinID:
XP_038572787
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MATKQVVIEAQMHESCGAARNGDPPIQVKILQVPAKCGPITAVQPPPTAAGVSKSDSVSV
PPKVIAGQGHQATSSTVQGLQTSSPSVMVLAKMPAPGGVSANGQPQLTKPALSQLASMNQ
ATTPGRTVVITVPRAAAPQPVTVAPRLPQTASPQVPANIQIPPGMMLIRSDRGQLILVSQ
QALAQAQQGPRGVTGQVPRILAPQVSAAAGNKGNEKVTVIRMTAPPSFQPAPVQKTAVVK
VIGVAPKSAVVQTHSAASERGSQPRIQAVVTETKKEPPTTFTPETLESVKKCKNFLVTLI
KLASSDSRSTNMADNVRGLVRSLLEGKLEAEEFTEQLYHELKSTPQPCLVPFLKKSLPAV
RRLTADPQSFIQQASTSTHNSITLSSTMKQSSTDTGQKCNTNQQVIQLPRGLTLRPGLTT
LAHSRNDISKSSRPSPKHTVIQSGKHLAGTFSMKHSFKQDPPRSTTFTFKNSSGSYKEDD
DINDVASMAGVNLKEENARILTTMVGSVVQSCQDQPFLSPNPVLSRILHTGQALGVTDVG
PEVVALVSHATQECLRGLLEKLTVMAEHRKAGLKEDPWHAKVSDVRSQLRFLEEVESLKK
KRKDKEERERLLRLARSRSHTEDPLHQQLKQRAKELQQIEQAQLQQREANLTALAAIGPR
KKRPLEQTESQVTLLPRQGVQRVTRIILRDLLMCMEQDHFLRHSLTLYKAMI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaaacaagtggttattgaagcccagatgcacgagtcctgcggggcagcaagg
aatggagaccccccaattcaagtcaagattttacaggtcccagccaaatgtggacccata
actgccgttcaacccccacccactgctgcaggtgtctcaaagagcgactctgtgtctgtt
ccacctaaagtcatcgctggccagggccaccaagctacctcctctacagttcaggggctt
caaacatcctctccttctgtcatggtgttagcaaagatgcccgccccaggaggagtgagc
gctaacggccaaccacagttaacaaaaccagctttgagtcagctggcctccatgaaccag
gccacgaccccagggaggaccgtggtgataacagtgccaagggcagcagctccacagcca
gtcacagtggcccctcggcttccacagactgcttccccacaggtcccagccaatatccag
attccaccaggtatgatgttgatccgcagtgatagaggtcagctgattctggtatcccag
caggctttggcacaagctcagcagggaccaagaggcgtcactggtcaagtgcccagaata
ctggccccacaggtatctgcagcagctggaaataaaggtaatgagaaggtgacagtgatc
aggatgacagccccacccagttttcagccagcacctgtccagaaaactgctgtggtaaag
gtgatcggtgtagctccaaaatcagctgtagtccaaacccacagtgctgcgtctgagcgg
gggagccagcctcgcattcaggcagtcgtcacagaaaccaaaaaagagccgccaaccaca
tttactccggagactctggaaagtgtgaagaagtgcaagaacttcctggtgactcttatc
aagctggcctccagtgactccaggtctaccaacatggccgacaacgtcagaggactggtc
aggagtctgctggaagggaagctagaagcagaggagtttactgaacagctctatcatgag
ttgaagtcgactccacagccctgcttggtgcctttcctcaagaaaagtcttcctgcggtt
cgtcgccttactgcagacccccaatcatttatccaacaggcttcaacttccacccacaac
tccatcactctgtcttccaccatgaagcagtccagcactgacacaggtcaaaaatgcaat
acaaaccagcaggttatccagctgcctcgtggattgactctgagacctggtttgacaaca
ttagcccactccagaaatgacatatctaaaagcagcagaccctcccccaaacacacagtg
atccagtcaggaaaacacttagcaggaacattttcaatgaaacattctttcaagcaggat
ccgcctcgttctactacatttacattcaagaacagttcaggatcttacaaagaagatgat
gacattaatgatgtagcctccatggctggagtcaacctgaaagaggagaatgcacggatc
ttgaccaccatggttggctctgtggttcagtcatgtcaggatcagcccttcctctcacct
aaccctgtgctcagccgaatccttcatacaggacaggcgctgggagtcactgatgtcggt
ccagaggtggtggctctggtttctcatgctacacaggagtgtctccgtgggctgttggag
aagcttactgtgatggcagaacaccgcaaggcaggcctgaaggaggacccgtggcatgcc
aaagtgagtgatgtacgctcccagcttcgcttcctggaggaggtggagagtttgaagaag
aaaaggaaagacaaagaggagagagagagacttctgcgtttggccagaagtcgctcacat
acggaggatccactgcatcagcagctcaagcaaagagccaaagagttacaacaaattgaa
caagctcagctgcagcaaagagaggccaacctcactgctctagctgccattgggcctcgc
aagaagagacctctggagcagactgaaagccaggtgactctgctgcccagacagggtgtt
cagagagtgactcggatcatcctgagggatctgctgatgtgtatggagcaggaccacttc
ctacgccactctctcactctgtacaaagcgatgatctga
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