Micropterus salmoides (largemouth bass): 119901275
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Entry
119901275 CDS
T07309
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119901275 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119901275 (rad54l)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119901275 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
119901275
NCBI-ProteinID:
XP_038572810
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRKQAGDSCEDEDWTCRSEKKGKGDNEIRESHISPFRKPLTQVNDRPAC
MDGDKHEAFIRSILSKPFKIPIPNYTGSLGIRALGLKRVGVRKALHDPFAEDALVLYEPP
TLNTHELIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISGSYGCIMADE
MGLGKTLQCITLMWTLLRQSPDSKPEIDKAIVVSPSSLVRNWYNEVEKWLGGRVTPVAID
GGSKEGIDRQLVNFISQHGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSGQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKLEQVVCCRLTPLQTELY
KRFLRQAKPIETLQEGKISVSSLSSITSLKKLCNHPALIYEKCVDGEDGFEGALDLFPAG
YCTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEKTTSDTHDKFHCRRCVNGREVRPPADDSDCTSDLSQWNHCFDKKGLRDQVLKASW
DAAVSFVFHQCSHKDQKGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagccttgctcccagtcaggttgccaaacggaagcaagcaggagattcctgt
gaggatgaggactggacctgtagaagtgagaaaaaaggaaaaggtgataatgagattaga
gagagccacatttctcccttcagaaagcctctgacacaagtgaacgaccgccctgcatgt
atggatggtgacaaacatgaggcatttattcgaagtatcctctccaagccatttaaaatt
cctattccaaattacacaggctctctgggaatcagggcacttggcctaaagcgtgtagga
gtaaggaaagcgcttcacgatcccttcgcagaagatgctttggtcctttatgagcctcca
actctgaacactcatgagctgatcaaagctgacaaagaaaaactaccagtccatgttgtt
gtggatccagttttaggaaaagtgctcagaccccatcagagagagggggtgaagttcctg
tgggagtgtgtgacgggcagacgcatctcaggatcgtacggctgcatcatggctgatgag
atgggcctggggaagactttgcagtgtatcaccctcatgtggacactgctacgccaaagc
cctgactctaagccagaaatagacaaagccattgtggtttcaccttccagtctggttcgc
aactggtacaatgaagtcgaaaagtggctgggaggacgcgtcacaccagtggccatcgac
ggaggctcaaaggaggggatcgataggcagctcgtgaacttcatctctcagcatggtttg
agagtaccgaccccaatcctgatcatttcatacgagacatttcgactgcatgctgaggtt
ctgcacaagggcaaagttggacttgtcatctgtgacgagggccaccgtctgaagaactct
gacaaccagacctaccaggccctgaatgccatgagtggccagaggagagtgctgatatca
ggcactcctatccagaacgacctgctggagtactttagcttggtccactttgttaatgct
gggatccttggtacagcccaggagtttaaaaagcgatttgagcttcccatcctgaagggt
cgagatgcagatgccagtgataaagacaggcagactggagaggagaaactcaaggagctg
atcagcattgtcaacaggtgtttgataaggagaacatcggatatcttgtctaaatatctt
cctgtgaaacttgagcaggttgtgtgttgcaggctgactcctctgcagacagagctgtat
aagcgtttcctgaggcaggccaaacccattgagacactacaagagggcaaaataagtgtc
tcctccctgtcttccatcacatcactcaagaaactgtgcaaccacccagctctcatctat
gagaagtgtgtggatggtgaggatggctttgagggggcgctggatctgtttccagctggc
tactgcactaaagctgtggagcctcagctctctgggaaaatgctggtacttgactacatc
ctggcaatgacaaggactacaactagtgacaaggtggtgctggtctccaactacactcaa
acgctggacctctttgaaaagctgtgcagatctagaagatacctctatgttcggctagat
ggcacaatgtccatcaagaaacgggccaagattgtggaaagattcaacagtccatctaac
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgattggt
gctaatcgcttggttatgtttgaccctgactggaacccagccaatgacgagcaggcgatg
gcacgcgtgtggagagacggccagaagaagacttgctacatctacaggctgctctctacg
ggaacgatcgaggagaagatcctgcagaggcaggctcataagaaagccctgagcagctgt
gtggtggatgaggagcaggatgtggagcgtcacttttctctgggcgaactccgagaactc
ttcactctcaacgagaagaccaccagtgacacacatgacaagtttcactgtcgccgctgt
gtgaatggtagggaggttcggcctcctgcagatgactctgactgtaccagtgacctttcc
cagtggaaccactgctttgacaagaagggcctgagggaccaagtgttaaaagcctcctgg
gatgctgctgtctctttcgtcttccaccagtgctctcataaggaccagaagggtgtcgta
tag
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