Micropterus salmoides (largemouth bass): 119901714
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Entry
119901714 CDS
T07309
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03271
Virion - Rotavirus
msam04145
Phagocytosis
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04514
Cell adhesion molecule (CAM) interaction
msam04517
IgSF CAM signaling
msam04518
Integrin signaling
msam04530
Tight junction
msam04810
Regulation of actin cytoskeleton
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
119901714
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119901714
04514 Cell adhesion molecule (CAM) interaction
119901714
04517 IgSF CAM signaling
119901714
04518 Integrin signaling
119901714
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119901714
09144 Cellular community - eukaryotes
04510 Focal adhesion
119901714
04530 Tight junction
119901714
09142 Cell motility
04820 Cytoskeleton in muscle cells
119901714
04810 Regulation of actin cytoskeleton
119901714
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119901714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119901714
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119901714
04515 Cell adhesion molecules [BR:
msam04515
]
119901714
04090 CD molecules [BR:
msam04090
]
119901714
Membrane trafficking [BR:
msam04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119901714
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119901714
Cell adhesion molecules [BR:
msam04515
]
Integrins
Integrin beta subunits
119901714
CD molecules [BR:
msam04090
]
Proteins
119901714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
119901714
NCBI-ProteinID:
XP_038573248
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDLRLLLIATLSAVLWGSWAQQEGSICIKANAQSCGECIQVDEKCGWCSDETFLTVGESK
SARCDDLESLKKRKCDVTKIENPRGSTTINQNRPVTNRKKDTAEKLKPEQITQIQPQKLT
LTLRSGEPQTFDLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTDKGDEFNRLVSQQQ
ISGNLDSPEGGFDAIMQVAVCEDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDAYNSLSSEVILENNRLPEGVSITYKSICKNGVVGTGENGRKCSNISI
GDEVSFKISIESQKCPSHGKTETIKIKPLAFNEEVEIVLKFICDCQCATNGEPNSEKCHE
GNGTFECGACKCNDGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENLAEVYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANFTGSACDCSLETSTC
LAKNGQICNGRGTCECGVCKCTNHQFQGPTCEICPTCPGVCTEHKDCVQCRAFEAGDKKD
TCERDCSYFQLIKVKDRDKLPQPTDQSFPLSHCKERDANDCWFYYTYAVRNDTKEVYVVE
TLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGE
NPIYKSAVTTVVNPKYEGK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggttacttttaatagcaacgttatcagcggtcctctggggcagctgggca
cagcaagagggaagcatatgcatcaaggcaaacgcacagtcctgtggggaatgcatccag
gtggacgagaagtgtggatggtgctcagacgaaaccttcctcactgtgggtgagtccaag
tcagctcgctgtgatgatctggagtccctgaagaagagaaagtgtgatgtgaccaaaatt
gagaacccacgtggaagcactaccattaaccagaaccgacccgtcaccaaccgcaagaag
gacacagcggagaaactgaagcctgagcagatcacccagatccagccccagaaactcacc
cttacactcagatctggtgagccccagacttttgatctgaaattcaagcgtgcagaggac
taccccatcgacctgtattaccttatggacctctccttctccatgaaagatgatttggaa
aatgtcaaaaaccttggtactgacctcatgagggaaatgcaggagattacctcagatttc
cggattggttttggctcatttgtggagaagacggtcatgccttacatcagcaccacgcca
gccaggctcatcaacccctgcacaggaaaccaaaactgtaccagccccttcagctataag
aacgtcctcaagctgacagacaagggagacgagttcaatcggttggtcagtcagcagcag
atctcaggaaacctggactctccagaggggggcttcgatgccatcatgcaggtggcggtc
tgtgaggaccaaatcggctggaggaacgtgactcgtctgctggtgttttccaccgacgct
ggtttccactttgctggagatggcaaactgggcggcattgtcctgcccaacgatgggaag
tgtcacctggagaacaacatgtacaccatgagccactattatgactacccctccatcgcc
catttggttcagaaactgagtgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcctgtttacaaggagttgaaaaacctgattcctaaatcagctgttggcacgctg
tcctcaaactccagcaatgtgatcaaactcattattgatgcttacaattctttgtcatct
gaggtcattctggaaaacaacaggctgccagagggagtttccatcacctacaagtccatc
tgtaagaacggtgtggtgggaaccggggagaacggcaggaagtgctccaacatctccatc
ggagacgaggtgtccttcaagatttccattgaatcccaaaagtgtccatcgcatggcaag
actgagaccattaaaattaaaccactggccttcaatgaggaggtggagatagttctgaaa
ttcatctgcgactgtcagtgcgccacaaatggagagcccaacagtgagaagtgccacgag
ggcaacgggaccttcgagtgtggagcctgcaagtgtaatgatggacgcatcgggcgtctt
tgtgagtgcagcaaggacgaagtgcggacagaggacctggatgccaactgtcgaaaagac
aacggtacagatatctgtagcaacaatggtgactgtgtctgcggcacctgcgaatgcaag
aagcgggagaatcttgcagaggtctacagtggcaagtactgtgagtgcgacaacttcaac
tgtgaccgatcgaacaacaagctctgcggaggacatgggcgctgcgaatgcaggaagtgc
atctgtgatgccaacttcacaggcagtgcctgcgactgttccttggagacttccacctgc
ctagccaagaacgggcagatctgtaatggccgcggtacttgtgaatgtggagtctgcaaa
tgcaccaaccaccaattccagggtccaacctgcgagatctgtcccacctgccctggtgtc
tgcactgagcacaaagactgtgtgcagtgccgagcatttgaggccggtgacaagaaggat
acatgtgagcgggactgtagctacttccagctaatcaaggtgaaggatcgcgacaagctg
ccccagcctacagaccagagcttcccactgagtcactgcaaagagcgagacgccaacgac
tgctggttctactacacctatgccgtcaggaacgacaccaaggaggtctacgtggtggag
acactggagtgcccggcaggacctgacatcatccccatcgtggcaggtgtggtagcaggt
attgtgctgatcggactcgcactgctgctcatctggaaacttctcatgatcatccatgac
cgccgagagtttgccaagtttgagaaggagaagatgaatgccaagtgggacacgggtgag
aatccaatctacaaaagtgccgttacaactgtcgtcaatccaaagtacgagggcaaatga
DBGET
integrated database retrieval system