Micropterus salmoides (largemouth bass): 119901714
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Entry
119901714 CDS
T07309
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03271
Virion - Rotavirus
msam04145
Phagosome
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04514
Cell adhesion molecules
msam04530
Tight junction
msam04810
Regulation of actin cytoskeleton
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
119901714
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119901714
04514 Cell adhesion molecules
119901714
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119901714
09144 Cellular community - eukaryotes
04510 Focal adhesion
119901714
04530 Tight junction
119901714
09142 Cell motility
04820 Cytoskeleton in muscle cells
119901714
04810 Regulation of actin cytoskeleton
119901714
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119901714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119901714
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119901714
04515 Cell adhesion molecules [BR:
msam04515
]
119901714
04090 CD molecules [BR:
msam04090
]
119901714
Membrane trafficking [BR:
msam04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119901714
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119901714
Cell adhesion molecules [BR:
msam04515
]
Integrins
Integrin beta subunits
119901714
CD molecules [BR:
msam04090
]
Proteins
119901714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
119901714
NCBI-ProteinID:
XP_038573248
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDLRLLLIATLSAVLWGSWAQQEGSICIKANAQSCGECIQVDEKCGWCSDETFLTVGESK
SARCDDLESLKKRKCDVTKIENPRGSTTINQNRPVTNRKKDTAEKLKPEQITQIQPQKLT
LTLRSGEPQTFDLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTDKGDEFNRLVSQQQ
ISGNLDSPEGGFDAIMQVAVCEDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDAYNSLSSEVILENNRLPEGVSITYKSICKNGVVGTGENGRKCSNISI
GDEVSFKISIESQKCPSHGKTETIKIKPLAFNEEVEIVLKFICDCQCATNGEPNSEKCHE
GNGTFECGACKCNDGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENLAEVYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANFTGSACDCSLETSTC
LAKNGQICNGRGTCECGVCKCTNHQFQGPTCEICPTCPGVCTEHKDCVQCRAFEAGDKKD
TCERDCSYFQLIKVKDRDKLPQPTDQSFPLSHCKERDANDCWFYYTYAVRNDTKEVYVVE
TLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGE
NPIYKSAVTTVVNPKYEGK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggttacttttaatagcaacgttatcagcggtcctctggggcagctgggca
cagcaagagggaagcatatgcatcaaggcaaacgcacagtcctgtggggaatgcatccag
gtggacgagaagtgtggatggtgctcagacgaaaccttcctcactgtgggtgagtccaag
tcagctcgctgtgatgatctggagtccctgaagaagagaaagtgtgatgtgaccaaaatt
gagaacccacgtggaagcactaccattaaccagaaccgacccgtcaccaaccgcaagaag
gacacagcggagaaactgaagcctgagcagatcacccagatccagccccagaaactcacc
cttacactcagatctggtgagccccagacttttgatctgaaattcaagcgtgcagaggac
taccccatcgacctgtattaccttatggacctctccttctccatgaaagatgatttggaa
aatgtcaaaaaccttggtactgacctcatgagggaaatgcaggagattacctcagatttc
cggattggttttggctcatttgtggagaagacggtcatgccttacatcagcaccacgcca
gccaggctcatcaacccctgcacaggaaaccaaaactgtaccagccccttcagctataag
aacgtcctcaagctgacagacaagggagacgagttcaatcggttggtcagtcagcagcag
atctcaggaaacctggactctccagaggggggcttcgatgccatcatgcaggtggcggtc
tgtgaggaccaaatcggctggaggaacgtgactcgtctgctggtgttttccaccgacgct
ggtttccactttgctggagatggcaaactgggcggcattgtcctgcccaacgatgggaag
tgtcacctggagaacaacatgtacaccatgagccactattatgactacccctccatcgcc
catttggttcagaaactgagtgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcctgtttacaaggagttgaaaaacctgattcctaaatcagctgttggcacgctg
tcctcaaactccagcaatgtgatcaaactcattattgatgcttacaattctttgtcatct
gaggtcattctggaaaacaacaggctgccagagggagtttccatcacctacaagtccatc
tgtaagaacggtgtggtgggaaccggggagaacggcaggaagtgctccaacatctccatc
ggagacgaggtgtccttcaagatttccattgaatcccaaaagtgtccatcgcatggcaag
actgagaccattaaaattaaaccactggccttcaatgaggaggtggagatagttctgaaa
ttcatctgcgactgtcagtgcgccacaaatggagagcccaacagtgagaagtgccacgag
ggcaacgggaccttcgagtgtggagcctgcaagtgtaatgatggacgcatcgggcgtctt
tgtgagtgcagcaaggacgaagtgcggacagaggacctggatgccaactgtcgaaaagac
aacggtacagatatctgtagcaacaatggtgactgtgtctgcggcacctgcgaatgcaag
aagcgggagaatcttgcagaggtctacagtggcaagtactgtgagtgcgacaacttcaac
tgtgaccgatcgaacaacaagctctgcggaggacatgggcgctgcgaatgcaggaagtgc
atctgtgatgccaacttcacaggcagtgcctgcgactgttccttggagacttccacctgc
ctagccaagaacgggcagatctgtaatggccgcggtacttgtgaatgtggagtctgcaaa
tgcaccaaccaccaattccagggtccaacctgcgagatctgtcccacctgccctggtgtc
tgcactgagcacaaagactgtgtgcagtgccgagcatttgaggccggtgacaagaaggat
acatgtgagcgggactgtagctacttccagctaatcaaggtgaaggatcgcgacaagctg
ccccagcctacagaccagagcttcccactgagtcactgcaaagagcgagacgccaacgac
tgctggttctactacacctatgccgtcaggaacgacaccaaggaggtctacgtggtggag
acactggagtgcccggcaggacctgacatcatccccatcgtggcaggtgtggtagcaggt
attgtgctgatcggactcgcactgctgctcatctggaaacttctcatgatcatccatgac
cgccgagagtttgccaagtttgagaaggagaagatgaatgccaagtgggacacgggtgag
aatccaatctacaaaagtgccgttacaactgtcgtcaatccaaagtacgagggcaaatga
DBGET
integrated database retrieval system