KEGG   Micropterus salmoides (largemouth bass): 119901714
Entry
119901714         CDS       T07309                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03271  Virion - Rotavirus
msam04145  Phagocytosis
msam04510  Focal adhesion
msam04512  ECM-receptor interaction
msam04514  Cell adhesion molecule (CAM) interaction
msam04517  IgSF CAM signaling
msam04518  Integrin signaling
msam04530  Tight junction
msam04810  Regulation of actin cytoskeleton
msam04820  Cytoskeleton in muscle cells
msam05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    119901714
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119901714
   04514 Cell adhesion molecule (CAM) interaction
    119901714
   04517 IgSF CAM signaling
    119901714
   04518 Integrin signaling
    119901714
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    119901714
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119901714
   04530 Tight junction
    119901714
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119901714
   04810 Regulation of actin cytoskeleton
    119901714
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    119901714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119901714
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119901714
   04515 Cell adhesion molecules [BR:msam04515]
    119901714
   04090 CD molecules [BR:msam04090]
    119901714
Membrane trafficking [BR:msam04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    119901714
Exosome [BR:msam04147]
 Exosomal proteins
  Proteins found in most exosomes
   119901714
Cell adhesion molecules [BR:msam04515]
 Integrins
  Integrin beta subunits
   119901714
CD molecules [BR:msam04090]
 Proteins
  119901714
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 119901714
NCBI-ProteinID: XP_038573248
LinkDB
Position
Unknown
AA seq 799 aa
MDLRLLLIATLSAVLWGSWAQQEGSICIKANAQSCGECIQVDEKCGWCSDETFLTVGESK
SARCDDLESLKKRKCDVTKIENPRGSTTINQNRPVTNRKKDTAEKLKPEQITQIQPQKLT
LTLRSGEPQTFDLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDF
RIGFGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTDKGDEFNRLVSQQQ
ISGNLDSPEGGFDAIMQVAVCEDQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDAYNSLSSEVILENNRLPEGVSITYKSICKNGVVGTGENGRKCSNISI
GDEVSFKISIESQKCPSHGKTETIKIKPLAFNEEVEIVLKFICDCQCATNGEPNSEKCHE
GNGTFECGACKCNDGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENLAEVYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANFTGSACDCSLETSTC
LAKNGQICNGRGTCECGVCKCTNHQFQGPTCEICPTCPGVCTEHKDCVQCRAFEAGDKKD
TCERDCSYFQLIKVKDRDKLPQPTDQSFPLSHCKERDANDCWFYYTYAVRNDTKEVYVVE
TLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGE
NPIYKSAVTTVVNPKYEGK
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggatctgcggttacttttaatagcaacgttatcagcggtcctctggggcagctgggca
cagcaagagggaagcatatgcatcaaggcaaacgcacagtcctgtggggaatgcatccag
gtggacgagaagtgtggatggtgctcagacgaaaccttcctcactgtgggtgagtccaag
tcagctcgctgtgatgatctggagtccctgaagaagagaaagtgtgatgtgaccaaaatt
gagaacccacgtggaagcactaccattaaccagaaccgacccgtcaccaaccgcaagaag
gacacagcggagaaactgaagcctgagcagatcacccagatccagccccagaaactcacc
cttacactcagatctggtgagccccagacttttgatctgaaattcaagcgtgcagaggac
taccccatcgacctgtattaccttatggacctctccttctccatgaaagatgatttggaa
aatgtcaaaaaccttggtactgacctcatgagggaaatgcaggagattacctcagatttc
cggattggttttggctcatttgtggagaagacggtcatgccttacatcagcaccacgcca
gccaggctcatcaacccctgcacaggaaaccaaaactgtaccagccccttcagctataag
aacgtcctcaagctgacagacaagggagacgagttcaatcggttggtcagtcagcagcag
atctcaggaaacctggactctccagaggggggcttcgatgccatcatgcaggtggcggtc
tgtgaggaccaaatcggctggaggaacgtgactcgtctgctggtgttttccaccgacgct
ggtttccactttgctggagatggcaaactgggcggcattgtcctgcccaacgatgggaag
tgtcacctggagaacaacatgtacaccatgagccactattatgactacccctccatcgcc
catttggttcagaaactgagtgaccacaacatccagaccatctttgccgtcactgaggaa
ttccagcctgtttacaaggagttgaaaaacctgattcctaaatcagctgttggcacgctg
tcctcaaactccagcaatgtgatcaaactcattattgatgcttacaattctttgtcatct
gaggtcattctggaaaacaacaggctgccagagggagtttccatcacctacaagtccatc
tgtaagaacggtgtggtgggaaccggggagaacggcaggaagtgctccaacatctccatc
ggagacgaggtgtccttcaagatttccattgaatcccaaaagtgtccatcgcatggcaag
actgagaccattaaaattaaaccactggccttcaatgaggaggtggagatagttctgaaa
ttcatctgcgactgtcagtgcgccacaaatggagagcccaacagtgagaagtgccacgag
ggcaacgggaccttcgagtgtggagcctgcaagtgtaatgatggacgcatcgggcgtctt
tgtgagtgcagcaaggacgaagtgcggacagaggacctggatgccaactgtcgaaaagac
aacggtacagatatctgtagcaacaatggtgactgtgtctgcggcacctgcgaatgcaag
aagcgggagaatcttgcagaggtctacagtggcaagtactgtgagtgcgacaacttcaac
tgtgaccgatcgaacaacaagctctgcggaggacatgggcgctgcgaatgcaggaagtgc
atctgtgatgccaacttcacaggcagtgcctgcgactgttccttggagacttccacctgc
ctagccaagaacgggcagatctgtaatggccgcggtacttgtgaatgtggagtctgcaaa
tgcaccaaccaccaattccagggtccaacctgcgagatctgtcccacctgccctggtgtc
tgcactgagcacaaagactgtgtgcagtgccgagcatttgaggccggtgacaagaaggat
acatgtgagcgggactgtagctacttccagctaatcaaggtgaaggatcgcgacaagctg
ccccagcctacagaccagagcttcccactgagtcactgcaaagagcgagacgccaacgac
tgctggttctactacacctatgccgtcaggaacgacaccaaggaggtctacgtggtggag
acactggagtgcccggcaggacctgacatcatccccatcgtggcaggtgtggtagcaggt
attgtgctgatcggactcgcactgctgctcatctggaaacttctcatgatcatccatgac
cgccgagagtttgccaagtttgagaaggagaagatgaatgccaagtgggacacgggtgag
aatccaatctacaaaagtgccgttacaactgtcgtcaatccaaagtacgagggcaaatga

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