Micropterus salmoides (largemouth bass): 119901830
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Entry
119901830 CDS
T07309
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119901830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119901830
Transporters [BR:
msam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119901830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
119901830
NCBI-ProteinID:
XP_038573464
LinkDB
All DBs
Position
Unknown
AA seq
2303 aa
AA seq
DB search
MKTGAQIRLLLWKNWTLRKRQKVRFLVEICWPVLLFIGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWIQGIFCNANNPCFRYPTRGESPGVVSNYNNSVLARFYVDAQELLLNETEVQ
QFGRLWREMSSFSNFMDTLRNNPFVLSGRGLKIDDILKDDEVLTAFLLRDEGLSESVVYQ
LINAKIRLEQFAYGIPDLQLKDIACSQALLERFIIFPSRMGLHGVRNAMCALTQQRLQKI
EDILYANLDFFKIFKLMPQVMDSSSEGIDLHFWGRVLKEASEKIQVLMARESSQELMKAV
SSLFQPGGPSSFTLLMSSVSNLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGTKSHNYV
YDDSTTPFCNAMMQTLESNPVTKIVWNSVKPLLMGKILYTPESPAVRKILKSANTTFEEL
ERLKNMAKAWEELGPQLWAFFHNSVQMNMIRDTLRNPTVMRFMDDSLGGTDFTTKDILNF
LNNGPEEGRETGMPNFDWRNIFNITDQIIRMFNQYGECINLDKFVAYTDESQMTRQALYL
LEENKFWAGVVFMDMFPWTASVPSHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
KYIWGGFAYLQDMIEHGIIKLHTGNDWPLGVYVQQMPYPCYVDDLFMITLNRCFPLFMVL
AWIYSVSMTVKGIVLEKELRLKETLKAMGVDNGVIWYTCFIDSFIMMTTSTALLTSIIMG
GKVLNYSNPILVFFFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFA
WQDRITRNMKLAASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEKDTYSFLTSIL
MMVFDAVLYAILAWYLDNVFPGQYGIGRPFYFPFQPSYWQNPAPSHTEMADPDAEKPEQD
NVAKDAESQGTPETHTCNGSADRKACKHQSKREQLERERELLRRQGETPNQEEECQESGM
EGQMFFENDPLGLVMGVQIKDLVKVFDRSTRPAVNCLNINFYESQITSFLGHNGAGKTTT
MSILTGLYPPTSGTAYINGRDIRTDMDIIRSSMGMCPQYNILFKHLTVEEHILFYSLLKG
RTQEEAEREVEDMLVDLGLPHKRDDEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSGV
DPYSRRSIWDLLLKYRAGRTVILSTHHMDEADLLSDRIAIISKGQLHCCGSPLFLKNCFG
VGFYLTLVRRMKDLKKKENDCDCASDCSCSCSICTRYKDQSQNQFQHLDRVLDGDIDSIT
GLIHHHVPEAKLIETIGQEMTYLLPNKGFKHRAYASLFRELEETLADMGLSSFGISDTSL
EEIFIKVTADGEAANNATTPEPNGVTQTNGITHGASDSSEGKGSRQVKGATLILKQFHAL
LVKRFHHAIRSQKEFLAQIVLPASFVLIALIFTTIVPPFGEYPSLTLTPWMYGQQFTFFS
NEQPFDPTMKRFTERLLSRPGLGTRCMEGESLGMPCSNSTSEWQDPDVSPLVSNILQSPE
WNQRNPSPSCQCSSSKKLTMMPICPIGAGGLPPRQRTEATGDTMLNLTDRNISDYLVKTY
PSIIRASLKSKYWVNEQRYGGLSVGGQLPILDVKPKDIQNVFHQLGRMLNITAGYYSGLA
LREIGPFLRYMESEFNIKVWYNNKGWHAMVAFMNVANNAILRAFLPPSAKPVDFGITAVN
HPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGV
SPLVYWVANFFWDMVNYSLSTALVVGIFMAFDKKCYTSPSNLPALIALLLLYGWSVTPMM
YPMSYLFNIPSTAYVSLSCINLFIGINSSAITFILELFENNRSLLMFNEWLKKCLLVLPH
FCLGRGLIDMAMNQAVTDVYARFGEEYTQDPFRWDFVGKNVAFMAVEGLVYFIINLLIQY
RFFLDHWLSDKNQTPIQDEDDDVAAERRRIYDGGSKTDILQLRDLSKTYVGRKRAAVDRI
CVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVTSGEATVVGYSILNEILDVHQNMGYCP
QFDAIDELLTGREHLYLYARLRGVPESEIRRVAEWGIQKLGLTEYASRCAGTYSGGNKRK
LSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAIMSVIQDGRAVVLTSHSMEECEALCT
RLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMKIKAAKPGLSPDLEPVESFIESSFPGCVQ
REKHYNTLQYEIAASSLARIFQLVVANKERLSIEDYSVSQTTLDQVFVNFAKQQTGEDED
ITLHRRTAGGRKDIKISPVQRKT
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggcgctcaaatccgcctgctactgtggaaaaactggactctccgcaagaga
cagaaggtccgctttctggttgagatctgctggccggtgttgttatttatcggtctggta
tggctgaggaaggccaatccactttaccaacaacatgaatgtcatttccccaacaaagcc
atgccttcagcagggattctgccctggatccagggaatcttctgcaatgccaacaacccc
tgtttcagatatccaaccagaggagagtctccaggtgtcgtctccaactataacaactca
gttttggcacggttctatgttgatgcccaggagctgctgctcaatgagacggaggtccag
cagtttggccgtctttggcgcgaaatgtcgtccttctcaaacttcatggacacgttacgc
aacaacccatttgtgctgtcaggccgtgggctgaagatagatgatattctgaaggatgac
gaggttctcacggccttccttttgcgagacgagggcctctcggaatctgtggtctaccag
ctcatcaatgctaaaatacgtctagaacagtttgcctatggtatcccagacctgcagctg
aaagacatagcctgcagccaggctctgctggagcgcttcatcatcttccccagtcgcatg
gggctccacggggtccgcaacgccatgtgtgccctcacccagcaaaggctgcagaagata
gaggacattctctatgctaatctggacttcttcaaaatcttcaaactgatgcctcaggtt
atggacagcagctcagaggggattgacctgcacttctggggtcgggttcttaaagaggcg
tcggagaagatccaagttctgatggcacgggagagctctcaggaactcatgaaggcggtt
tcctctctgtttcaacccgggggtccctcctcgttcaccctgctgatgtccagcgtgtcg
aacctcttctgtgggtacccagagggaggcggctccagggtcctgtccttcaactggtat
gaggacaacaactacaaggtgttcctgggggtcaatggcaccaagagccacaactatgtc
tatgacgactcgacgactcccttctgcaacgccatgatgcagaccctggagtccaaccct
gtcacaaaaattgtgtggaattcggtcaagcccctgctgatgggaaagatcctgtatacc
cccgaatcccctgcggtccgcaagatattaaagagtgccaacacaacattcgaggagtta
gagaggttgaagaacatggccaaggcctgggaagagttgggcccacagctctgggctttc
ttccacaacagtgtgcagatgaacatgatcagggacactctgagaaacccaacagtgatg
cgcttcatggacgacagtctggggggcactgactttaccacgaaggacattctgaacttc
ttaaacaatggtccagaagaaggaagggagacaggcatgcccaactttgactggaggaac
atttttaacatcaccgaccagattatacgcatgttcaaccagtatggagagtgcatcaat
ctggataagtttgtggcttacacggatgagtcccagatgacccgtcaggccttgtaccta
ctggaggagaacaagttttgggccggcgtggtcttcatggacatgtttccctggaccgca
agtgtaccctcgcatgtcaagtacaagatccgcatggacattgacgccgtggagcgcacc
aacaagatcaaagacaggtactgggaccctggccccagagcagacccaatggaggaccag
aagtacatctggggaggctttgcctatctgcaggacatgattgaacacggcatcatcaag
cttcacacaggcaacgactggccgctcggggtctacgtccagcagatgccatatccgtgc
tatgtagacgacctcttcatgatcacattgaaccggtgcttccccttgttcatggtgctg
gcctggatctactctgtgtccatgactgtgaagggcattgtactggagaaggagctgcgc
ctcaaggagaccctcaaagccatgggggtcgacaacggagtcatttggtacacgtgtttc
attgacagcttcatcatgatgactacaagcacggcgctgctcacctccatcatcatgggc
ggaaaggtgctgaattacagcaaccccatccttgtcttctttttcctgctgacttttact
gtcgccaccatcatgcagtgtttcctgatgagtgtgttcttcaacaaggccaacctggca
gctgcctgcagcggcatcatatacttcaccctctatctgccgcatatcctctgctttgcc
tggcaggaccgcatcaccaggaacatgaagttggctgctagcttgttgtctccagtagcc
tttggctttgggacggagtatctgtcgcggtatgaggagcagggtttgggtctccagtgg
gacaacatccagaccagccctttagagaaagacacctactccttcctcacatccatcctc
atgatggtgtttgatgctgtcctctacgccatcctggcctggtatctggacaatgtcttc
ccagggcagtatggcattggtcgaccattttacttcccattccagccctcatactggcaa
aatcccgcaccctctcatacagaaatggctgatccagatgctgagaaacctgagcaagac
aatgtggcgaaggatgctgagagccagggcacaccagagacacacacctgtaatggttca
gctgacaggaaagcctgtaagcaccaaagtaagagggagcaactggagagagagagggag
ctgctgagacgacaaggggaaactccaaaccaggaggaggagtgtcaggagtcagggatg
gaaggtcagatgttctttgagaacgacccattgggcctggtgatgggggtgcagattaag
gacctggtgaaggtgtttgacagaagcactcgtccagctgtcaactgtctcaacattaat
ttctatgaaagccagatcacatccttcttggggcacaatggggctggaaaaaccaccact
atgtcaatcctgactggcctgtaccctcctacatctggcacagcctacattaatggaaga
gacattcggaccgacatggacatcatccgctcctcgatggggatgtgcccgcagtacaac
atcctcttcaaacatctcacagtggaggagcacatcctgttctactcactgctaaagggt
cggactcaggaggaggcggagagggaggttgaggacatgctggtggaccttgggctgcct
cacaagagagacgatgaggctcagaacctttcaggcggcatgcagaggaaactgtcagtt
gccatggcatttgttggcggatcaaaagtcgtgatcctggacgaacccacctcaggagtg
gacccctactccaggagatccatttgggacctcctactaaaatacagagctggccggact
gtaattctgtccactcaccacatggacgaggccgacctgctgagtgaccgcatcgccatc
atctccaaaggacaactccactgttgcggatcgcccctcttcctcaagaactgctttgga
gttggtttctatttgacactcgtacgccgaatgaaggatctgaagaagaaggagaacgat
tgcgactgtgcctcagactgctcctgttcctgctccatctgtaccagatacaaagatcag
tctcagaaccagttccagcatctagacagagttctagatggggatatagacagcatcact
ggtctcatccaccaccacgtccctgaagccaagctgatcgagacgattggccaggagatg
acctatctgctccccaataagggcttcaaacatcgagcgtatgccagcctgtttagggag
ctggaggagacactagccgacatgggcctcagcagcttcggcatctctgatacatcgctg
gaggagatattcataaaggtcactgcagatggagaagcagcgaataatgccaccactcct
gaacctaatggtgtgacgcagactaacggcataacccatggtgcatcagatagcagtgaa
ggaaagggctccaggcaggtgaaaggggccactctgatcctgaagcagtttcatgcgctg
ctggtgaagaggtttcaccacgccataagaagccagaaagagttcctggcacagatcgtc
cttcctgccagttttgtcctaatagctctgatattcaccacgatcgtccctccgtttgga
gagtatccaagtctgactctgaccccctggatgtacggacagcaattcaccttcttcagt
aacgagcaaccatttgaccccacaatgaaacgcttcacagagcgcttactgagcagacca
ggcctggggacacgctgtatggaaggagaatcactaggaatgccctgtagtaacagcaca
tcagagtggcaggatcctgacgtctctcctctagtcagcaacatcttacagagtcctgag
tggaaccagaggaacccgtctccttcctgccagtgcagctccagtaagaagcttaccatg
atgcccatctgtcccatcggagcaggcggcctgccacctcgccagcggaccgaggccacg
ggagacacaatgctgaacctgacggacaggaacatctctgactacctggttaaaacctac
cccagtatcatcagagccagtttgaagagcaaatactgggtgaatgaacaaagatatggc
ggcctgtcggttggaggacagcttcccatcctggacgtcaaacccaaagacattcagaat
gttttccaccaactgggaagaatgctcaacatcacagcgggttactattctggacttgca
ctcagggaaattggtcctttcttacgatacatggaaagtgaattcaatataaaggtttgg
tataataacaaaggctggcacgctatggtggccttcatgaatgtggccaataacgccatt
ctgcgggccttcctgcctccgtctgccaaacctgtcgattttggcatcaccgccgtcaac
caccctctgaacctcaccaaagagcagctttccgaagtcacagtgttgaccacttcagta
gacgctgtggtggcaatctgcgtcattttcgccatgtccttcatccctgccagcttcgtc
ctctacctcatccaggagcgtgtgaccaaggccaagcacctacagtttgtcagtggggtc
agccctttagtgtactgggtggccaacttcttctgggacatggttaactacagtctcagc
actgcattggtggttggcattttcatggcttttgacaaaaagtgttacacatcaccatcc
aacctgccagcactaatagcactgcttctactatatgggtggtcagtgacgcccatgatg
tatcccatgtcctacttattcaacatcccaagtactgcatatgtgtccctgtcctgcatc
aacctgttcataggcatcaacagcagcgctatcaccttcatcctggagctttttgaaaac
aatcggtccttattgatgttcaatgagtggctaaagaaatgcctgctggtgctccctcac
ttctgcctggggcgaggactgatagacatggccatgaaccaggctgttactgatgtttat
gccagatttggtgaagagtacacacaagaccctttccggtgggactttgtggggaaaaat
gttgctttcatggcagtggaaggcttagtctacttcattatcaatcttctgatccagtat
cgtttcttcttggaccactggttatcagacaaaaaccagactccaatacaagatgaggat
gatgacgtggcagcagagaggcgaagaatttatgacggagggagcaagacagacatcctg
cagctcagagacctctctaagacgtatgtgggcaggaagagggcagctgtggaccggatt
tgcgttggtgtccctgcaggagagtgcttcggcctcttgggagttaatggagctggaaag
acgacgaccttcaaaatgctgactggtgacactgatgtcacctctggggaggctactgtg
gttggttacagcatcctgaatgagattctggacgtgcaccagaacatgggctactgccct
caatttgatgccatcgacgagctcctaaccggcagggagcatctgtacctctacgctcgt
ctcagaggggtacctgagtcagagatccgcagagtggcagagtggggcatccagaagctg
ggtctgacagagtatgccagccgctgtgcagggacctacagtggaggcaacaagcgcaaa
ctctccacagccatcgccatgattggttgcccagcgctggtgcttctggatgagcccacg
acagggatggacccccactcccggcgcttcctgtggaatgccatcatgagtgtcattcaa
gacggcagggctgtggtgctaacatcacacagtatggaggagtgtgaagccctctgcact
cgactggccatcatggtcaatgggaccttcaagtgtctgggtaccatccagcatctcaaa
tacaaatttggtgacggctacgtcgtgactatgaaaatcaaggcagctaaaccgggcttg
tccccagatctggagcctgtcgagagcttcatcgagagctctttccccggctgtgttcag
agggagaagcactacaacacgctgcagtatgagatagccgcctcctcccttgccagaata
tttcagctggtggtggccaataaagaaaggctcagcatcgaagactactctgtttcccag
acaacactggaccaggtgtttgtcaactttgccaagcaacagacgggagaggatgaggac
attacattacacagacgaacagcaggtggaagaaaagacatcaagatctcgccagtgcag
aggaaaacttga
DBGET
integrated database retrieval system
