Micropterus salmoides (largemouth bass): 119902003
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Entry
119902003 CDS
T07309
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119902003 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119902003 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119902003 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119902003 (rb1cc1)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119902003 (rb1cc1)
Membrane trafficking [BR:
msam04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119902003 (rb1cc1)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119902003 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119902003
NCBI-ProteinID:
XP_038573763
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPMIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYINYQR
DLEEIKVKLTKLGTAVSVMARIPLLECLTRHSYRESMERSSSTPGKDSDETEEEKSTDSV
RQPTDAQRPSKLSTSFSASGAATCEPTGDQETNEMTDSGGLRAALLDDDTPEFANPSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKLLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISVEDLQYLKSCCPLEVQPFLITENNFN
KAVDGVSHKLPTMCDFEPLNRHVETLHQLVQAAQSVDEMSQTITDLLSEQRVSYSQRSAL
FTPQSESIPGTTTPMSTKTPSSLSLQGPSCQPIHVPVPAPLEDLSPDSIDAQTFDFETIG
HPNMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPISPEMMVESLYS
SVINAIDNKRMQDTTTLERENSRITVLKQVIDKYRSAAEESHSNLRSVKDDLCHLRGLVL
KEQHDFGFVLRSLTTEVRNIVDSICQTHELELKEQHQSELLSLRQELEKQVHTLAEENQV
NQNIVRDVQRAMLELEGLMERKEKELAQLENDKERWAETESNQTDRIKNQEQMISNQAGE
IKTLSASIDSLTSQLKNLHCEIEHSQQKIREELEVVEQSHLKELEDRMKQEHKAELETII
KGNQEALEHLAAENCAKLSEAADHHASALREKDNQMKDLETRITELAELRCKLEVELALK
ESETEEVRLLFEEAKMQQAEAVESQVEAKTKVLSEELAHFKKQLQVKNEEYEVDLAELRT
LMRIEKDHCISELVDRHEEETILLRNELSSLQQKTQDAERNNAEQQRKLKQELDQRVAAL
SEEKEEQLRSFQEREQELRTVISNLLAEKDLLSKKLEQDRKANEKDLEKEEASKAASLDS
FKELEQQKEEIEKRLLDKIRQLEKELRETKSSKSDEGLPLHAEGCADAGAPLSLDSALQE
RLQFQLEILEKQKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIISELTEELRKVTQQ
QDKDKGLIETLSEDRASLMQEKKHLEEELNRLRSTALVSSAFFTPNPSAQEVTEAGAAAA
RVLPVAGPFSSESMAESDRLASVAAIRDDEHVDSAVEASMVTVHDNILISEEKQRILLLE
RTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTV
GPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVK
AVPWNRKV
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gctgtccaaactgtgctggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagaaagacgtgtctgc
agctacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggatccaatgatccccaaaaccaccttctcaattgagagtgagattcaggtt
aaggtggaagagtctctacttatgccagctgtctttcacactgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaataaacttagctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgctattatggctaatctggatgactgc
acactctcgtatcagaagttactcatgaaatttgacactgcatacataaattaccaacgt
gacttggaagaaattaaagtgaaacttacgaagttagggacagcagtttctgtaatggcg
aggatacccctgctggaatgtttgacaagacacagttatagagagagcatggagaggtcc
agctcaaccccaggaaaggattcagatgagacggaagaagaaaaatccacagactctgtg
cgtcaacctaccgatgcacaacggccttccaagttatcaacatccttctctgcttcaggg
gcagccacatgtgagccaactggagaccaagaaacaaatgaaatgactgacagtggtggg
ctgagagctgcactattggatgatgacactccagagtttgccaacccatcctccttcaat
gtcacactattggactggatcaatgtgcaagacagacccaatgatgtggaatcagttgtg
aggaaatgctttgactccatcaataggcttgacccacggatcattcagcccttcctggca
gattgtcgtgacacaatcgccaagctagataatcaaaacatgaaagccatcaaggggctt
gaggacaggttgtacgctctagaccaaatgattgcaagctgtaagaagttggtaaatgaa
cagaaagaacttgctcagggatttttggccaatcagaagcgtgctgaaaacctgaaggat
acatctgttctgccagatttgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctggacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtccgactcaaatggtgctgctacgtgatgcttcatgcagaccaggat
ggcgagaaacttcaggctctactcagacttctgacagagctaatggaaagagtgagggtg
gtggaggccctcagtacagtgccccagatgtactgcttggcagtggtggaagtcgtcagg
aggaaaatgtttatgcgccactacagagagtgggcttatgcacttgtgaaggacgggaaa
ctactgtacgaggccgagaagttcaaaagggaatcctttgggaagctcttcaggaagtct
ttcctcagaaatcgtttgtttagaggacttgattcatggccaccaacatcattttgtaca
cgaaagcccagaaggtttgatgatgaacttccagacatctccgttgaggacctgcagtac
ttgaaatcttgttgtcctttagaagtgcagccgttccttataacagaaaacaacttcaac
aaggctgttgatggtgtttctcacaagcttcccacaatgtgcgacttcgagcccttgaat
cggcatgtagagacactccatcagctggtccaagctgcacagagtgtggatgagatgtct
caaactattactgacctgctaagtgagcaaagggtatcctatagtcagagatcagccttg
ttcaccccacagtctgaaagcatacctgggactacgacaccgatgtccacaaaaacccca
tcctctcttagccttcagggacccagctgccagcctatacatgttcccgtcccagctcct
ctagaggacttatccccagacagcatagatgcacaaacatttgacttcgaaaccattggc
catccgaacatggatccagtcctgcagcagggctcccttgacttggattctctagcagaa
agccccgaatctgacttcatgtctgctgttaatgagtttgtgattgaagagaacttgacc
tctcctaaccccatcagtgaccctatcagccctgaaatgatggtcgagtcgctgtactct
tcagtcatcaatgctattgacaacaagcgtatgcaggataccacaacactagagagggag
aactcaaggatcacggtcctcaaacaagttattgacaagtaccgatcagcggccgaggag
tcccattccaacttaagaagtgtaaaggatgacctctgtcacttaagaggcctggtgtta
aaagaacaacatgactttggctttgtcttgaggagtttgactacagaggtgcgcaacatt
gtggacagcatctgccagacccatgaacttgaactgaaggagcagcatcaaagtgagctt
ctctcccttaggcaagagcttgagaagcaggttcacacactagcagaggaaaaccaagta
aaccagaacattgtcagagatgtccagcgcgcaatgctagagctggaggggcttatggag
cgcaaagagaaagaacttgctcagctcgagaatgacaaagaacgatgggctgaaacagag
agtaaccagacagataggatcaaaaaccaagaacagatgatcagtaatcaagctggagag
atcaagacgctctcggcttcaatagactctttgaccagccagcttaagaatctgcactgt
gagattgaacatagccagcagaagatccgggaagagttggaagtggttgagcagtcccac
ttgaaggagctggaggacagaatgaagcaggaacacaaggcagaactggagaccattatt
aagggtaaccaggaggctcttgaacatctggctgctgaaaattgtgcaaaattaagtgag
gcagctgatcaccatgctagtgcgcttagagagaaggacaaccaaatgaaggacctggag
actcgaattactgagctggcagaacttcgctgcaaactagaggtggagctagccctcaaa
gagtcagagacagaagaggtgagactcttatttgaggaggccaagatgcagcaggctgag
gctgtggagtcccaggtggaggctaagaccaaagtccttagcgaagagctggcacatttc
aaaaaacagcttcaggtcaaaaatgaggagtatgaagtggatctagcagagctgaggact
ctcatgaggattgagaaggaccactgcatctcagagctggtggacagacacgaggaggag
actattttgttgcgcaatgagctctcttccctgcagcagaaaacccaggatgctgagagg
aacaatgcagagcagcagcggaaacttaagcaggaattagaccagcgagtggctgctcta
agtgaagaaaaagaagagcagctgaggagtttccaagaacgggagcaagagttgaggact
gttatcagcaatttgctggcagaaaaagacttgctctccaaaaaactagagcaggacaga
aaagcaaatgagaaagatttagaaaaagaagaggcatcgaaggctgcatcattagattcc
tttaaagagttagagcaacaaaaggaggagatagagaagagactgttagacaaaattaga
caacttgaaaaagagcttcgtgagacaaaatcctcaaaaagtgatgaagggttgccgctg
catgctgaggggtgtgcagatgccggagcacctctgtctctagactcggcactacaagag
cggctacagttccagttggagatcctggagaagcagaagaacgaagagatacagaacctt
aagacatcactaatcgcagagcagcagactaatttcaacactgttctaactcgagagaag
ctgaagaaggagcagatcattagtgagctcacagaggagttgcggaaagttacccaacag
caagacaaggataagggtctgatagagacactctccgaggaccgagctagtctcatgcag
gagaagaaacacttggaagaagagcttaaccgcctgcgcagcactgcactggtctcctct
gcgttcttcactcccaacccgtcagctcaggaggtcacagaagctggagctgcagcagct
cgagttctgcctgttgctgggcctttttcctctgagtccatggctgaaagtgacagactg
gcctctgtggcagccattcgagatgatgaacatgttgattcagcggtggaagccagcatg
gtgacagtccatgataacatcctgatatcagaggagaaacagcggatactcttacttgag
aggactttacacatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcaa
agcatgtcgtctgtgtcgtcacggcattcagacaaaatcgccatcagagatttccaggta
ggcgatttggttctaatcatcctggatgaaaggcatgacaactacgtgctgttcacagtt
ggtcccaccctctacttcctccactcagagtctctcactgcactggacctcaaaccagca
tcagggacctcaaggcggccgtgggtacttggaaaggtgatggagaaggaatattgccag
gcaaaaaaggcccagaacaggttcaaggttcctttaggaaccaagttctacagagtgaaa
gctgttccatggaacagaaaagtataa
DBGET
integrated database retrieval system
