Micropterus salmoides (largemouth bass): 119902029
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Entry
119902029 CDS
T07309
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119902029 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119902029 (exosc4)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119902029 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119902029 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119902029
NCBI-ProteinID:
XP_038573831
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRTRHDRAIINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCASTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggagcttctgtccgaccagggataccgtttagatggaagaaaggccacc
gagctgcggaaagtccaggcccgtatgggtgtgttcgctcaggccgacggctccgcgtat
ttggagcagggaaacacgaaagctctggcagtggtgtacggtccacatgaaatgcgaggt
tcacgcagccggactcgtcatgaccgagccattatcaactgtcagtacagcatggccacg
ttcagcacagcagagaggaagaggagacctcatggggaccgcaagtctactgagatgagc
ctccacctgaagcagacgtttgaagccgctgtgatgacccagctctacccacgctctcaa
atagacatctatgtcaagattctgcagtcagatggagggaactacagcgtgtgtgtaaat
gcagccactctggcggtgattgacgctggcatccctatgcgggactatgtgtgtgccagc
acggtcgggtttgtggacgagacgcccctcgctgatctttgctatgcagaggaaagtgga
ggtgtgagctctctggccttagcactgctcccccggggcggacagatcgctctgctgcag
atggatgccagactgcatcaggaccacttagaggctctgatcgaagctgccatgacggct
tgtaaaggagtgagcaaggtgctggatgaggtggtgcgacaacatctccaagaagtttct
gtgctctctggagagtga
DBGET
integrated database retrieval system