KEGG   Micropterus salmoides (largemouth bass): 119902029
Entry
119902029         CDS       T07309                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119902029 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119902029 (exosc4)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     119902029 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     119902029 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 119902029
NCBI-ProteinID: XP_038573831
LinkDB
Position
Unknown
AA seq 245 aa
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRTRHDRAIINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCASTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggcctggagcttctgtccgaccagggataccgtttagatggaagaaaggccacc
gagctgcggaaagtccaggcccgtatgggtgtgttcgctcaggccgacggctccgcgtat
ttggagcagggaaacacgaaagctctggcagtggtgtacggtccacatgaaatgcgaggt
tcacgcagccggactcgtcatgaccgagccattatcaactgtcagtacagcatggccacg
ttcagcacagcagagaggaagaggagacctcatggggaccgcaagtctactgagatgagc
ctccacctgaagcagacgtttgaagccgctgtgatgacccagctctacccacgctctcaa
atagacatctatgtcaagattctgcagtcagatggagggaactacagcgtgtgtgtaaat
gcagccactctggcggtgattgacgctggcatccctatgcgggactatgtgtgtgccagc
acggtcgggtttgtggacgagacgcccctcgctgatctttgctatgcagaggaaagtgga
ggtgtgagctctctggccttagcactgctcccccggggcggacagatcgctctgctgcag
atggatgccagactgcatcaggaccacttagaggctctgatcgaagctgccatgacggct
tgtaaaggagtgagcaaggtgctggatgaggtggtgcgacaacatctccaagaagtttct
gtgctctctggagagtga

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