Micropterus salmoides (largemouth bass): 119902075
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Entry
119902075 CDS
T07309
Symbol
vps4b
Name
(RefSeq) vacuolar protein sorting-associated protein 4B isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03250
Viral life cycle - HIV-1
msam03272
Virion - Hepatitis viruses
msam04144
Endocytosis
msam04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119902075 (vps4b)
03272 Virion - Hepatitis viruses
119902075 (vps4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119902075 (vps4b)
09143 Cell growth and death
04217 Necroptosis
119902075 (vps4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119902075 (vps4b)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119902075 (vps4b)
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
119902075 (vps4b)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
Check point factors
Other check point factors
119902075 (vps4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIT
AAA
Vps4_C
AAA_lid_3
AAA_16
TIP49
AAA_5
AAA_22
AAA_14
RuvB_N
IstB_IS21
AAA_17
AAA_18
DUF815
AAA_2
AAA_33
nSTAND3
RNA_helicase
AAA_24
NPHP3_N
Csx12
PhoH
Parvo_NS1
Mg_chelatase
Sigma54_activat
AAA_7
Viral_helicase1
TEBP_OB2-like
ResIII
bpMoxR
NACHT
AAA_28
SpoIISA_toxin
Motif
Other DBs
NCBI-GeneID:
119902075
NCBI-ProteinID:
XP_038573907
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MEPTNLQKAIAIAQKASEEDQAENYEEAIRSYQHAVKYFLHIVKREPQGKDGNQKIREKC
KQYLDRVEELQDYLVNKEKAIDLASKAAQEDKAQNYEEALRLYQAAVQYFLHVVKYETQG
DKARQSIRAKCAEYLDRAEKLKEYLKKKDKAPPAKPVKESQSDDKGNESDEGDDPEKKKF
QNQLSGAIVMEKPNIKWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPP
GTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFSLAREHKPSIIFIDEI
DSLCGSRSENESEAARRIKTEFLVQMQGVGNDNEGVLVLGATNIPWTLDSAIRRRFEKRI
YIPLPEEHARGFMFKLNLGSTPNSLSESDFVTLGKKTDGYSGADISVIVRDALMQPVRKV
QSATHFKRVRGPSRTDPNHVVDDLLTPCSPGDPNAIEMTWMEVPGEKLLEPIVSMSDMMR
SLANTKPTVNEQDLDKLKKFTEDFGQEG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacaaatctacagaaagctattgccatagcacagaaggcctcagaggaagac
caggctgagaactatgaggaggccatccgctcctaccaacatgctgtcaaatactttctg
cacattgtaaaacgtgaaccccagggtaaagatggcaaccagaagatcagagaaaaatgt
aaacagtacctggacagagtggaagaactacaggactacctagtgaataaagagaaagcc
attgatcttgccagcaaggcggctcaggaggataaagctcagaactacgaggaggctctg
cgtctgtaccaagctgctgttcagtacttcctccatgtggtgaaatatgaaacccagggt
gacaaagctagacagagcatccgggcgaaatgtgcagagtacttggacagagcagagaag
ctgaaggagtatctaaagaagaaagacaaagctcctcccgccaagcctgtcaaagagtca
cagtctgatgacaaggggaatgaaagcgatgaaggtgatgatccagagaaaaagaagttc
caaaatcaactctcaggtgcaattgttatggagaaacctaacatcaaatggaatgatgtt
gccggtttagagggagccaaggaggcactgaaagaagctgttattcttcccatcaaattc
ccccaccttttcaccggaaagagaactccatggcgagggatcttgctctttggacctcca
ggtacaggaaagtcatatctggctaaagctgttgccacagaggcaaacaactcaaccttc
ttctcgatctcctcgtctgaccttgtctccaaatggctgggagagagtgaaaagttggtg
aagaatctttttagccttgcaagggagcacaagccttccatcatcttcattgacgaaatc
gactctctgtgtggctcaagaagtgagaatgagagtgaagctgctcgccgtattaagaca
gagttcctggttcagatgcagggtgtgggaaatgacaacgagggagtgctggtacttggg
gcaacaaatatcccatggaccctagattcagccatcaggagaagatttgagaagaggatc
tacatcccgctgcccgaagagcacgctcgcggcttcatgttcaagctcaacctgggctcg
acccccaacagcctcagcgagtctgactttgtcactctgggcaagaagacagatgggtac
tcgggcgcagatatcagtgtcattgtcagggacgctctaatgcagcctgttcgaaaggtc
cagtcagcaacccacttcaaacgggtacgaggtccatcaagaactgaccccaaccatgtt
gtagatgacctcttgactccttgctcacctggcgatcccaacgcgattgaaatgacatgg
atggaggtccctggggagaagctattggaacctatagtatccatgtcagacatgatgagg
tctctggctaacacaaagccaacagtcaatgaacaagatctggacaaacttaaaaaattc
acagaggactttgggcaggaaggctag
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integrated database retrieval system
