Micropterus salmoides (largemouth bass): 119902333
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Entry
119902333 CDS
T07309
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119902333
Enzymes [BR:
msam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
119902333
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
119902333
Prokaryotic type
119902333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
119902333
NCBI-ProteinID:
XP_038574375
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MRSCSWSCGLLFSPYSIFHIRLVFLNGVYPQSLVQHTLVFVFFVFCSDLQTHTVLSRVVH
NFHCSSPFHCAPRRLLRFVAYRNQRPSSVFSCLTKSITSEITMSAVKRKATSAAAAEEPS
AKQQKLAPMKEKKERAGGWLQDLVTKQRTEMKELKFNNKRLRFISETKKIKQGSEGVLYW
MSRDQRVQDNWALIHAQQLAMKESLPLHICVCLHVPKSELSTLRHYSFMLKGLEEVAEEC
KTLDIQFHLLHGSPGEVVPSFVSDCSLGAVVTDFSPLREPLQWLEDVKKMLPKDIPFIQV
DAHNIVTCWEASPKLEYAARTIRGKINKLLPEFLTQFPLVEKHPYTATRTTKQVDWDKTL
ASLQVDKTVGETEWAKPGTKAGLAMLESFIDVRLKQFDTKRNDPNAAALSQLSPWIRFGH
LSAQRVALQVQSSGKSAGQSVSSFIEELVVRRELTDNFCFYNKKYDSVEGAYEWAQKTLK
DHGKDKRPYLYTCEQLEKAKTHDKLWNAAQYQMITEGKMHGFLRMYWAKKILEWTSSPKE
ALSIALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWGERPVFGKIRYMNYKGCLRKFAV
AQFERKYCPKNL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttgtagctggtcgtgtggtttgcttttttctccatattctatattccatatc
aggcttgtgtttcttaatggagtctatcctcagagtttagtccaacatacacttgttttc
gtattttttgttttctgtagtgatttgcaaacgcacacggtgttatcacgagttgttcac
aattttcactgcagctcaccttttcactgtgcaccaaggcgcctcttgaggtttgttgcc
tacagaaatcagaggcccagttcagtattctcctgcctgaccaagtcaatcaccagtgaa
atcaccatgtcagccgtaaaacgcaaggcaacatctgctgcagcggctgaagagcccagt
gccaagcagcagaagttggctcccatgaaggagaagaaggagagagctgggggctggctg
caggaccttgtgacgaagcagaggacagaaatgaaggagctgaaattcaacaacaagcgc
cttcgttttatatctgaaactaaaaagataaagcagggctcggagggtgtcctgtactgg
atgtcaagagaccaaagagtacaagataattgggcactgatccatgcacagcagcttgcc
atgaaggagagcctacctctgcacatctgcgtctgcctgcatgtcccaaaatcagaactg
tccactctgagacattacagctttatgttgaaaggtctggaagaagttgcagaggaatgt
aaaaccttagacatccagttccacttgctgcatggttcaccgggggaagttgtccctagc
tttgtgtcagactgcagccttggggcggttgtgacagacttctcccccctcagagagcca
ctgcagtggctggaggatgtcaaaaagatgcttccgaaggacataccattcatacaggtt
gacgcccacaatattgttacctgctgggaagcatcacctaaacttgagtacgccgcaagg
acaatcagaggaaaaatcaacaagcttttgccagagttcctcactcagtttcctctggta
gagaaacacccctacacggctacaagaaccacaaaacaagtagactgggacaaaaccctg
gcctccctgcaggttgacaaaacagttggagagacggagtgggctaagccaggcaccaag
gcaggattggccatgttggagtccttcattgatgtacgccttaaacagtttgacaccaaa
cgcaacgacccaaatgctgcagccctcagccagctctccccctggatccgcttcggccac
ctgtcagcccagcgtgtggcgctgcaagttcagagcagcgggaagagcgcaggtcagtcc
gtgtcctccttcatcgaggagctggtggtgcgcagggagctgactgacaacttctgcttt
tacaacaagaaatatgacagcgtcgagggtgcgtatgagtgggctcagaagaccttaaaa
gatcatggcaaagataagaggccctatctctacacgtgtgagcagctggagaaagcaaag
acacatgacaaactctggaatgctgctcagtaccagatgatcactgaggggaagatgcat
ggtttcttgaggatgtactgggccaaaaagattctggagtggacttcttcaccaaaggag
gcgctctcaatcgctctgtacctaaacgatcgctatgagctggatggccaggaccctaat
ggctttgtcggttgtatgtggtcgatttgtggcatccatgaccagggctggggagagaga
cctgttttcggaaagatccgctacatgaactacaaaggctgccttcggaagtttgccgta
gcccagtttgagagaaagtattgtcctaaaaacctttga
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