Micropterus salmoides (largemouth bass): 119902590
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Entry
119902590 CDS
T07309
Symbol
chd7
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119902590 (chd7)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119902590 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
119902590
NCBI-ProteinID:
XP_038574812
LinkDB
All DBs
Position
Unknown
AA seq
3303 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDDLGDCFPQQPTPAQSNPLAQQTNPSLNHEHQGNRGYHQ
GMIHGAGPGPGQPKLGQMYDHGPYTGYDQPGAPGGRMMAQNGPSQGPPNVNTAMNGMASH
YHNNPTNSSNPLHGYPGDAGGGAGGGGGVWGQQQSRSAYQQPPTQPGAGPNQMGGYQMSQ
GNYGGMQGPPTPNATRINQHYPPQSMAPPPAQDPSHYLGHVGMGGTQMRHPQPQTQPQGY
PNMGHTPRYPHSPSRQPPHTHQHQQGIAGFAGGQYSGYQAQYGAMGPGMAQGPNANVSAN
TSQAMGPGQLGQRFNQGTGPAAGQQGQRYPPGPQHQPQPHQTHSAPMQPQAGQQGQPMHP
LNHPQNLPQPSNQPQSHLAPPAQGSYPSTPSMSPMRVLGTPTPPPQQGRPPSAGLAGPPE
VAGYTALQSPPNSMALPQRTPQTPLSAPHPQHQQQLNMPPNAGQMYPSMGPQRGPQIGPN
RPPLQQQGPHEAPVSQGGDQRLLQAQQQAXRSGQPLQPAPMGFQGPPVSQHGVPAPIQGL
APQAQNTQPQHTHLXPHPQHLQSTPPPPNQASHPWAPPPXHPLSSPPLTPQKVPHVQHSP
IDPSGDASTMASDRPTVGAGAPGQPISTEQPSDQETKPKKKRKKKSKVMDGEEQEIGKKA
AKKGAGGEEDVKSEFPGTGSDAGEQVTGTGIVEGSSPPVEEKKKRKKKPKEKAEGKEPKE
PKTPKTPKTPKTPKEPKEPKEKKTKNSTPKTKTPKKTSSKKVESEGGATAAKKDPKRKRE
SSVSDDVEVKSPLPSPPEEDDDDGVQKRRSSRQVKRKRYTEDLEFRISDDDSGDDSPAPK
SPSSSQQQDVAEAEGPVVEKIMGLRSTKKERESGEEVEVEEFYVKFKGFSYLHCRWADLE
ELEKDKRIHQKIKRFKAKQQLNSFITEMDDEPFNPDYVEVDRVLDVSESTDENGETVTLY
LVKWCSLAYEDSTWELKADIDQSKIEEYERIAAHTPNTKRVDRPPAADWKKLEGSREYRN
GNALREYQLEGLNWLTFNWYNSRNCILADEMGLGKTIQSITFLYEMYMKGIEGPFLVIAP
LSTIPNWEREFRTWTELNAVVYHGSQASRKTIQAYEMYYRDAQGKIIKGVYRFHAVITTF
EMILADCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEEL
FSLLNFLEPERFPSEQIFMTEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEET
IIEVELTNIQKKYYRAILEKNFSFLSKGGAGASGGGGSSVPNLLNTMMELRKCCNHPYLI
NGAEEKIAEEFRDSHGGRADMPDMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMV
RCLDILEDYLIQRRYPYERIDGRVRGNLRQAXIDRFSRPDSDRFVFLLCTRAGGLGINLT
AADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDK
AVLQSMSGRENANSGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTH
TITIESEGKGSTFAKASFVATGNRTDISLEDPDFWQKWAKKAELDMDAINGRNTLVIDTP
RVRKQTRHYSSVKEDEMMEFSELESDEDEPSKPSSKPRRPQDKTQGYPRSECFRVEKNLL
VYGWGRWSDILAHGRFKRPLKEADVETICRALLAYCLLHYRGDENIKSFIWDLITPSADG
TTKTLTNHSGLSTPVPRGRKGKKGKPPAPPPQTPRADWLASCNPDHLLQEDSYKRHLKHH
CNKVLLRVRMLYYLRQEVVGDQAERILEGADSSELDIWIPQPFHAEVPVDWWDSEADKSL
LIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAMAAEQRGSDMMADGAEGEDEDPEYKP
LRMPFKDDMDDFTNSPLDDKDDTVEGEAEAKSGENGQSVTGGSGASGSVERLYWPAASAL
TARLRRLITAYQRSNRREQLRQEALNRPDGRRRRRREFLPSIAMVTDTGGGATYIQDGAG
VFVTEGSPYLAKGGAYFAKGGQFMQEASPVMTASSLMADGAMYYKERRQRWTRREEADFY
RVVSTFGVVFDTQRQKFDWTQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQIKNDTE
LPDPTLIIDPITEERASRTLYRIELLRRIREQVLPHPLISERLKLCQPSPDLPEWWECGR
HDRDLLLGASKHGVSRTDYHILNDPTLAFLEAHQRFTSQRGAGVAMSAQGEITKAGMGAA
ENPSAPLLTPAELASAAAAAKVDVNVAKEEEGEGKEVKAEEGEAEVAVKMETEGGYANDI
PCTKTETPDEQKENEGEVREDEVKKEEQVKKEEVAQPQVEKEEQSGEGEKTPKAADDKDL
TEERKSLTLGGQKEMTAELPEHPESSPKAQADRKTAEEEDREERENPESPKSPKSADTEK
SPEEEEEERMDEDDKSEKSSQAEVSAASEQKNFDEESIASLSTSAQNETRDGFCPDDLAE
TSALQALHDRNYGFSFWPKDRVMINRMDNICEVVLKGKWPVNRRHIFDFPSNLMPGHVST
LTAAAVAAPAEGSLQRRSLAELTMAGMHSTYSGSEDKTSPQVHEDALSLTVPRQRRRRRR
KIEIEAERAVKRRNLMEMVAQLRESHAAAESQSQAIDLTKGMHRHHKASPSLASFPSALV
TSPSLKAQMELLQQATPSGHRSNGSLEADLPIMKRRRGRRKNVEGLELLFMGNKRAGGDE
AEETKASGVEAVRAHRPLTVPEQSPSARSLASGSLEEEEPAVSNKELGEWLRQHPTYTMD
MAGFTPKSEELLLSQFSKPKQKRHRCRNPNKIDINTLTGEERVPVVNRRNGRKMGGAMAP
PMKELPRWLLENPEFSIAPDWTDIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGRRPKSE
IAKAAAAAQAAAAAQAAQASLVNAASSAGGINPLLLNSLFGGVDLSSLQSLQSLQLAAGL
MAFPAPTDSKQAAANAAAASMLPLMLPGMGGLPNMATLPNMFGLSGLFGGNLATASAAAA
AASNSAIAAASGNTNGTMEGEGDETGTTKRKREGEDKDDGEDEVEDGDEEEEAEENEEGV
KKVKKRKKEEKSVNVTGAPQIQAADSSAEASVNGDAAALLAAAGMSANSLAFNPFLLSTM
APGLLYPSMFLPPGLGGLSLPGFPSASTLAELQSAMAGALGGNAVTTNPPRNEEEKAGLK
ATEEEEEEEEDDDEEGGGESDLAEEKEGGAEEDTRGEDSALEDGGMGGEEEEAAAAASPQ
KSD
NT seq
9912 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagtttattcggggacgatgcaggactgttctcagatgga
ttagatgatttaggagactgctttcctcagcagcctacccctgctcagtcaaaccctcta
gcccagcagactaatccctctctgaaccacgagcaccagggaaacaggggctaccaccag
gggatgatccacggagctgggcctggcccagggcagcctaaattagggcaaatgtacgac
cacggcccctacacaggctacgatcaaccgggtgcccccggaggacgaatgatggcccag
aatggccccagccaggggccaccaaacgtgaatacagccatgaatggcatggcttcccac
taccataataacccaactaactctagcaacccactccatgggtacccgggtgatgctgga
ggaggagcaggaggtggcggtggagtgtgggggcagcagcagagcagatcagcttatcag
cagcccccaacacaacccggggccggccccaaccagatggggggctaccagatgtctcaa
ggaaactatggtgggatgcaaggcccacctacacccaatgcaactcgcattaaccaacac
taccctccacagagcatggcaccccctcctgctcaggacccatctcactacctgggacat
gttggaatgggggggacccagatgagacacccccagccccagacacaaccccagggctat
cccaacatgggccacacaccccgatacccacactccccctcccgacagcctccacacacc
caccagcaccaacaaggcattgcggggtttgcaggaggccagtactctggttatcaggcc
cagtatggagccatgggacctgggatggctcagggtcctaatgctaatgtcagtgctaac
accagccaggccatgggaccagggcagcttggccagaggttcaaccagggaacaggccca
gcagccgggcaacaggggcagcgatacccccctggaccgcaacatcaaccccagccccat
cagacccattctgccccgatgcagccgcaggcagggcagcagggccagcctatgcacccc
ctaaaccacccccagaatctgccccagccatcaaaccagccccagtcccaccttgccccc
ccagctcagggatcttacccctccaccccatctatgtcccccatgcgggttttgggaacc
ccaacacctcctcctcaacagggcagaccccctagcgcaggcctagctggacccccagag
gttgcggggtacacagccctgcagtctccacccaattctatggctcttccacagagaacg
ccccaaacccctctatccgccccccacccccaacaccagcagcaactcaacatgcccccc
aacgcagggcagatgtatcccagcatggggccgcagcgtggaccacagattggtccaaat
agacccccgctccaacagcaaggcccccatgaagctccagtcagccaggggggagaccag
cgtctgctccaggcccagcagcaggccntccggagcgggcagcccctgcagccggctccc
atgggtttccagggtccgcctgttagtcaacatggagttccggccccaatccagggctta
gcgccacaagcccagaacactcagcctcagcacacgcacctgnccccccacccccagcac
ctgcagagcacgccccctcccccaaatcaggcctcccacccatgggcgcctccgcctncc
cacccgctctcctcaccccctctcaccccacagaaagtgcctcacgtacagcattccccc
atcgacccgtcaggtgatgcctcaacgatggcttctgacaggccgacagttggcgccggc
gcccccggccagcctatcagcacagagcaacccagcgaccaggagaccaagccaaaaaag
aagaggaagaagaaatcaaaagtaatggatggagaggaacaagagataggaaagaaggca
gcaaaaaaaggcgcaggaggtgaggaagacgtcaagtccgaatttcccgggacaggaagt
gatgcgggtgaacaggttactggcacaggaattgtggagggaagttcgccgccggtggag
gagaagaaaaagcggaaaaagaaaccaaaggagaaggcggagggcaaggagcccaaagag
cccaagaccccgaagacgcccaaaacccccaaaacccccaaagagcccaaggagcccaag
gagaagaaaaccaagaattccactcccaagaccaagacccccaagaaaaccagcagtaaa
aaggttgagtccgagggcggagctaccgctgctaaaaaggatcccaagaggaagagagag
tcatcagtcagcgacgacgtggaggtcaagtctccactcccctcaccacctgaagaggac
gatgatgatggtgtacagaagcgtcgttctagccgtcaggtgaagaggaagaggtacacc
gaggatctggagtttaggatctcggatgacgacagcggagatgactcaccagcacctaag
tccccatcgtcatcacaacagcaggacgtagctgaggctgaagggcccgttgtggagaag
atcatgggcttgcgcagcaccaagaaagagcgggagtcgggggaggaagtggaggtggag
gagttctatgtcaagttcaagggcttttcgtacctccactgccgctgggcagacctggag
gagctggagaaggacaagagaatacaccagaagattaagaggtttaaggccaagcagcaa
ctcaacagcttcataactgagatggacgatgagccttttaacccagactatgtggaggtg
gaccgtgtcctggacgtttcagagagcacagatgaaaacggagagacggtgaccttatat
ttggtgaaatggtgcagcctggcctacgaagactccacatgggagctgaaggctgacatc
gaccagtccaagatagaggaatacgaacgcatcgctgcacacacacccaacactaagaga
gtggatcggcctcctgcagccgactggaaaaagctggagggctccagggaatacaggaac
ggcaacgcactcagggaataccagctagaaggcctcaactggctaacattcaactggtac
aactcacgtaactgtatcttggccgatgagatgggtctaggaaagaccatccagtccatt
acattcctctatgagatgtacatgaagggcatcgaggggccattcctggtcattgccccg
ctctccaccatccccaattgggagagagagttcaggacctggaccgagctcaacgcggtg
gtctaccacggcagccaggccagccgcaagaccatccaggcctacgagatgtactacaga
gacgcacagggtaagataataaagggagtatatcggttccacgccgtgataacaaccttt
gagatgattctggctgactgtccggagctgcgcagcgtgccgtggcgctgcgtggtgata
gatgaagcccaccgtctcaaaaatcgaaactgcaaactactggaaggactgaaaatgatg
gacatggagcacaaggtcttgttgacaggaactcctctccagaacactgtggaggagctt
ttcagcttactcaacttcctggagcccgagcgattcccgtctgaacagatattcatgact
gaatttggagacctcaagactgaagaacaggttcagaaacttcaaggcattttaaagccc
atgatgttgcgaagactgaaggaggacgtggagaagaacctggcccctaaggaagagacc
atcatagaggtggagctcacaaacatccagaagaaatactatcgggccattctggagaag
aatttctccttcctgtccaaaggaggtgcaggagccagtggaggcgggggatccagtgtc
cccaaccttctcaacaccatgatggagctgaggaaatgctgcaaccacccctacctcatt
aatggagcggaagaaaagattgcggaggagtttagggactcccacggagggagggcagac
atgccagacatggccctccaagccatgatccaggccgccggcaagctggtgctcattgac
aagctgctgcccaaactgaaggccggcgggcacagagtcctggtgttcagtcagatggtc
cgctgtctggacatcctggaggactacctcatccagagacggtatccctatgaacgtata
gacggcagagtgcgcggtaacctgcggcaggcangcatcgaccggttctcccgaccggac
tcggaccgctttgtcttcctgctgtgtacaagagctggagggctcggcatcaacctgact
gcggcagatacctgcatcatctttgactctgactggaaccctcagaacgatctgcaggcc
caggccaggtgtcatcgtatcggccagtccaaggcggtcaagatctaccggctgatcacc
aggaacagctacgagagagagatgttcgacaaggccagtctgaagctggggctcgacaag
gccgtcctccagagcatgagcggacgagagaacgccaacagcggggtccagcagttgtcc
aagaaggagatcgaggacctgctgaggaagggagcgtacggcgctctaatggacgaggaa
gacgaaggctcaaaattctgtgaagaagacatcgaccagattctccagagacgaacccac
accatcaccatagagtctgagggcaagggctctacctttgcaaaggccagttttgttgca
acgggtaaccgaacagacatttctctggaggatccggacttctggcagaaatgggccaag
aaggcagagctggacatggacgccatcaatggacggaacacgctggtgattgacacgcca
agggtgaggaagcagacgcggcactacagcagcgtcaaagaggacgagatgatggagttc
tccgagctggagagcgacgaggacgaaccgagcaaaccctcatccaaaccacgccggccc
caagacaaaacccagggctaccccagatctgagtgcttcagagtggagaagaacctgctg
gtttacggttggggtaggtggagcgacatcctggctcatggtcgcttcaagcgtcccctg
aaggaggccgatgtggaaacgatctgtcgagccctcctggcctactgcctgctgcattac
cgcggtgacgagaatatcaagagtttcatctgggatctgatcaccccaagcgcagacggg
accaccaagacgctgaccaaccactctggtctctcgaccccagtccctcggggcaggaag
ggcaagaaggggaagcctccggccccacctcctcagactccacgagctgattggctggcc
agctgcaatcccgaccacttactgcaagaggatagctacaagagacacctgaaacatcac
tgtaacaaggtgttgctgagggtgaggatgctgtattatctgcgacaggaagtcgtaggc
gatcaggccgagcgcatcctggaaggagcagactccagcgagctggatatctggattccc
cagccgttccatgccgaggtcccggtcgactggtgggacagcgaggccgacaaatccctg
ctcatcggcgtcttcaaacacggctatgagaagtacaactcgatgcgagctgaccccgcc
ctgtgtttcttggagagggtgggcatgccggacgccaaggctatggccgctgagcagaga
ggctccgacatgatggcagatggcgcagagggtgaagatgaggatccagagtacaagccg
ctgcggatgccttttaaagatgacatggacgacttcaccaactctccactggatgacaaa
gatgacactgtggaaggtgaagccgaagctaaatcgggtgaaaacggtcaaagtgtgact
ggtgggagcggcgcttcaggctccgtcgagcgactctattggccagcagcctcagccctg
actgcccgtctgcgccgcctcatcacggcctaccagcgctccaaccgcagagagcagctc
cgccaggaggccctcaaccggcctgatggtcgcagacgacgacgcagggagttcctgccg
tccattgccatggttactgacacaggaggtggggcaacttacatccaagatggggcgggg
gtgttcgtgacagaaggaagcccctatctcgctaagggaggtgcttactttgccaaaggt
ggacagttcatgcaggaggcgtcaccagtaatgactgccagctccctgatggctgatgga
gccatgtactacaaggagagaagacaaaggtggactcgtcgtgaggaggctgatttctac
cgcgtagtttccaccttcggagtcgtctttgacacccagcgtcagaaatttgattggaca
cagttcagggccttcgctcgactggacaagaaaactgacgagagcttggagaaatattac
tactcattcattgccatgtgcaaacgtgtctgcaggatgcagattaagaatgatacagaa
ctcccagacccgaccctgatcatcgaccccatcacagaggagcgtgcctctcgcaccctg
taccgcatcgagctcctccgccgcatccgagagcaggtcctccctcacccgctgatctct
gagcgcctcaagctctgccagccctccccagacctcccggagtggtgggagtgtggccgc
catgaccgggacctcctcttgggggcctctaagcacggcgtaagcaggacagactatcac
atcttaaacgaccctaccttggcctttttggaggctcaccagcgtttcaccagccagcga
ggggctggcgtcgcaatgagcgcccagggggagatcaccaaagctgggatgggagcagcg
gaaaacccctctgcaccactcctcacccctgcagagctggcgagcgctgcagctgctgcc
aaagttgatgttaatgtagctaaagaggaggagggcgaagggaaggaggtgaaggccgag
gaaggggaagcagaggtggcggtgaaaatggaaacggagggaggatacgccaacgacatt
ccatgtaccaagactgaaactcctgatgaacagaaggaaaatgagggagaggtcagagaa
gatgaggtgaagaaagaggagcaggtgaagaaagaggaggtcgcccagccacaagtagaa
aaagaggagcagagtggagaaggagagaagactcccaaggcagcagatgacaaagactta
acagaagagaggaagagtttgactctcgggggccagaaggagatgaccgccgagctccca
gaacatcctgagtcctctcctaaagcacaagctgaccgcaagactgcagaggaggaagac
cgagaggagagggagaacccagagtcccctaaatctccaaagtcagctgacacagagaaa
agcccagaggaggaagaggaagagaggatggatgaagacgacaaatcagagaagtcctct
caggctgaagtgagtgctgcatcagagcagaagaacttcgatgaggagagcatcgcgtct
ctgagcacgtcggcccaaaacgagaccagagatgggttctgccccgacgatctggcggaa
acgtcagcgctgcaggccttacatgaccgaaactacggattctcattctggcctaaggac
cgagtgatgatcaacaggatggataacatctgcgaggtcgtcctgaagggcaagtggccc
gtcaacagacgccacatctttgactttcccagcaacctgatgccgggacacgtctccacc
ttaaccgccgcagccgtagccgcgccggccgaggggtcgctgcagaggcgcagcttggcc
gagctgacgatggccggcatgcattcgacatacagcgggagtgaagataaaacatcgccg
caggttcatgaggacgctctgagcctgacggtgcctcggcagaggaggaggaggaggaga
aagatcgagatcgaggcggagagggcagtcaagagacgcaacctgatggagatggtggct
cagctgagagaaagccacgctgctgcggagtcccagagccaggctatagacctcaccaag
ggtatgcaccgtcaccacaaggcctctccctcattggccagcttccccagtgccctggtg
acaagtccctccctcaaagcccagatggagttgctgcagcaagccacgccctccggacac
agatccaatggttcactggaggctgacctgcccatcatgaagaggaggaggggccgcagg
aaaaatgtggagggcctggagctgctgttcatgggcaacaagagagcaggaggggatgag
gctgaggagaccaaggcttcaggtgtggaggccgttcgtgcccacagacccctcactgtc
ccggagcagagccccagtgccagatctcttgcctccggcagtctggaggaggaagaacca
gcagtttccaacaaggagctgggagagtggctgaggcagcacccgacatacaccatggac
atggctggatttacaccaaagagcgaggagttactgctgtctcagttttctaagcccaag
cagaagcgccatcgctgtcgaaaccccaacaagatcgacatcaacaccctgactggagaa
gagagagtgcctgtggtcaacagacgcaacggacgcaagatgggtggggccatggctcca
ccaatgaaggagcttcccaggtggttactggagaatccagagttctccattgccccagat
tggacagacattgtcaaacagtcgggtttcctcccagaagccatgtttgaccgccttctg
accggccctgtagtcagggaggagggcgtccgtcggcgggggaggcgacccaaatccgag
attgccaaggcagccgccgccgcccaggcagcagcggcagctcaagctgcccaggcatca
ctggtcaacgctgcttcctctgcaggaggcatcaaccctctgctgttgaacagtctgttt
gggggggtggacctgtcgtccctccagagcctccagtctctccagttggctgctggtctg
atggccttccctgcgcccaccgactccaaacaggctgctgccaacgccgccgccgcctcc
atgctgcccctcatgctgcccggcatgggaggcctacccaatatggccaccctccccaac
atgttcggcttaagcgggctgtttggtggtaaccttgcgacggcctcagccgccgccgct
gctgcatccaactccgccatcgccgccgcgtcagggaacaccaacggaacgatggaggga
gagggtgacgagacggggacgacaaagaggaagagagagggagaagataaagacgatgga
gaagacgaggtggaagatggtgacgaggaggaggaggctgaggagaatgaggaaggagtg
aagaaggtgaagaagaggaagaaggaggagaaatcggtgaatgtcactggagcgcctcag
atccaagctgctgattcgtcagcggaggcatccgtcaacggtgacgcagcagccctgttg
gccgcagccggcatgtccgccaattctctggcgtttaaccccttcctcctctccaccatg
gcccccggcctcctctacccctctatgttcctacctccaggcctcggggggctcagcctg
cccggcttcccctccgcctccaccctggccgagctgcagagcgccatggccggggcgctg
ggcggtaacgccgtgaccacaaaccccccgagaaacgaagaggagaaggcggggctaaaa
gctacagaagaagaggaggaggaggaggaggatgacgacgaggagggaggtggagagagt
gacttggccgaggagaaggagggcggagcggaggaggacacgagaggcgaggattcagcc
ctggaggatggagggatgggaggagaggaggaggaggcggcggcggcggcgtctccacag
aagagtgactga
DBGET
integrated database retrieval system
