Micropterus salmoides (largemouth bass): 119902628
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Entry
119902628 CDS
T07309
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119902628 (ift57)
Cilium and associated proteins [BR:
msam03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
119902628 (ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
HBM
Med9
Adhesin_P1_N
DUF4200
MCPsignal
DUF1664
Mod_r
ATG17_like
Spectrin_SYNE1
AAA_13
WXG100
DUF745
Prominin
Spectrin_1st_PEPL
SpecificRecomb
DUF3837
Motif
Other DBs
NCBI-GeneID:
119902628
NCBI-ProteinID:
XP_038574886
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADEGRRGDEDERGPGAAHQVFVVMECLLEKLKVLNYEEEVLAKHNMKHLSRHYFVSSPY
LAFNSGEQFYMFTIIAAWLINAAGRPFTEPQEYDEPNATVSNILAELRAFGVKVDFPPSK
LKSGSGEHVCFVLDRLAEEALRRKGFTFRRPNYPTETTEEESVIEDDAELTLSKVEEEMI
EEPDDEEENVMDLEALKLRTTRTEVEPSSKPDEILESTIDAAEWNLEVERVLPQLKVTIR
TDNKDWRIHVDQMHQHRDGIQSSLKEAKSYLDKLQEDIGKTLEKVSSREKYINNQLEHLI
QEYRSAQAKLSQAKERYQQASGGVTERTRVLAEISEELDKVKQEMEEKGSSMSDGAPVVK
IKQSLTKLKQEIVQMDVRIGVVEHTLLQAKLKEKSNMTRDMHATNIPEPAAGPFA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaagggagacgaggagacgaagacgaacgcggtcccggagcagctcatcag
gtgtttgtggtgatggagtgtttgctggaaaagttgaaggtgttgaactacgaggaggaa
gttctggccaaacacaacatgaaacacctgtccagacattactttgtctccagtccgtat
ctggcgttcaattcgggcgagcagttctacatgttcaccatcatcgcagcgtggctcatc
aacgcggcagggaggccgttcaccgagcctcaggagtacgacgaacccaacgccaccgtg
tccaacatcctggcagagctcagggctttcggtgttaaggtggacttcccgccctccaaa
ctgaaatcaggttcgggcgaacacgtctgcttcgtgctggaccgactggctgaagaggct
ctgaggagaaaggggttcaccttcagaagaccaaactacccaacagaaaccacagaagaa
gagtctgtgatagaggacgacgcagagctcacgctcagcaaagtggaggaggagatgatc
gaggagcctgacgatgaagaggagaatgtgatggacctggaggctctgaagttacgaacc
actcgcactgaagtagaaccttcctccaaacctgatgagatcctggagtcgacgattgat
gccgcagagtggaacctggaggtggagagagtcctgccacaactcaaagtcaccatcaga
acagacaacaaggactggaggatccacgtggaccagatgcatcagcacagagacgggatc
cagtcctcgctcaaagaggccaagagctacctggacaaactgcaggaggacatcggtaag
actcttgagaaggtgagcagcagagagaagtacatcaacaaccagctggagcatctgatc
caggagtaccgcagcgctcaggccaaactcagccaggcaaaggagcgctaccagcaggcc
agtggaggagtgactgagaggaccagagtcctggcagagatcagcgaggagctggacaag
gtgaagcaggagatggaggagaaaggcagcagcatgtctgatggagctccggtggtgaag
atcaagcagagtttgaccaagctgaagcaggagattgttcagatggacgtgaggatcgga
gtcgtcgagcacacactgctgcaggccaaacttaaggagaagtctaacatgacgcgcgac
atgcatgccaccaacatccccgagcccgctgccggacccttcgcttag
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