Micropterus salmoides (largemouth bass): 119902741
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Entry
119902741 CDS
T07309
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119902741 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119902741 (smg7)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119902741 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
119902741 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
2H-SAK
Motif
Other DBs
NCBI-GeneID:
119902741
NCBI-ProteinID:
XP_038575017
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPSRV
KSSQLGIISNKQSSGSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLDKLDSLREKLEEQFQRLMLQKAFSSQQLVHITVIN
LFELHHLRDLTADGGEQSYSSEQQISWFQLLGLFMSFLGVMCSRALLNKSRGEEIMGECP
LPAIKVSLEWLKLRPSVFHEAAVDKRQYIWPWLVSILNSFQPKEDDVSGSSVTPLPEEFE
LQGFLALRPALRSLDFTKGHQGILVDRDGLPVHTRHQRLISLGKWVADNQPGLIQCRASE
DGLLVFITDIPEQDIEEPQEKDAPVLQESSNGEQTPNDGGNSGLKSVLSAGKTQSSWPDG
SDRPVVTFKENIKPREQGREATRNHHLKDSGKERRDFAKGNGAAGKAELKRDGKRKSELK
KAGHEKTTDAGKQVKAQTELRKTPVSEAKKTPVTQTQTTCSNQFIPIHHPGAFPPLPSRP
GFPPSAYVIPPPVGFPGLQVNPGFTFSTGVSVPSFLQPGVHTQAGTQGGKPSHIPYSQQR
PSGPGPGQGPGSSGPGPMNQGPSQGQQPQAPSQQALQQSVQLQVQAMSQQQQQSPTKPVQ
QVGMGKSPPHHPGMQQYMQVQDQPAQMWNQAQAALQKISPMQMSMKQQQPQQQQQQQQQQ
QQQQQAFYMAAQDPLKLYEHQLQPPNMDKKIKYPNMQDFYWEPSYRIGDGLAVMADRIKR
PPPGGICSEQDPSAGPRGPPFELPNQTRMENGPEVISQSSLLPMSGFPMQEYNQNSIFSQ
AYGKNLPPSSKPDTPMMHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPS
SPPTHNHGAMPFSNFGPIGTPDSRDRRVVDRWKADKTGAVSGFGLDYLPASASSAASDNS
WHQAGPPGSSWASQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRG
HGAMNPPH
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtacctacgacaggcagaggccctgaaggctgacatgacagat
tcgaagctgggggcggcagaggtgtggacgtcacggcaggccctgcaggatctgtaccag
aagatgctggtgaccgacctggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcatgcttttaagaaccagatcaccacactgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgtttctggaagcggcgagcggtttc
tacacacagttactgcaggagctgtgcacggtgtttaacgttgacctgccttctcgcgtc
aagtcgtctcagctcggcatcatcagcaataagcagagcagcggcagcgccatcgtcacc
ccgcagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagacata
gcacgttaccgtaaccagaccagccaggcggagtcttactaccgacatgcggctcagctg
gtcccgtcaaacggtcagccgtacaaccagctggccatcctggcgtcctctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcggtcaagttcccgttcccagca
gcctccaccaacctgcagaaggccctgtccaaagctctggagagccgcgacgaggtgaaa
accaagtggagcgtgtcggatttcatcaaggccttcatcaagtttcacggccacgtgtac
ctgagtaagagtctggacaaactggatagtctgagggagaaactggaggagcagtttcag
aggctgatgttgcagaaagccttcagctctcagcagctggttcacatcaccgtcatcaac
ctgtttgagctccaccacctcagagacctgacggctgacggcggcgagcagagctacagc
agcgagcagcagatcagctggttccagctgctcggactcttcatgtccttcctgggtgtc
atgtgcagccgcgctctgctcaacaagagccgaggggaggagatcatgggggagtgtcct
ctgccggccatcaaagtgtctctggagtggctcaaactgaggcccagcgtcttccacgag
gccgctgtggacaagaggcagtatatctggccctggctggtctccatcctcaacagtttc
cagcccaaagaggacgacgtgtcgggttcctcagtgacgcccctgccagaggagtttgag
ttgcagggtttcttggcgctccgcccggctctgaggtccctggacttcactaaaggtcat
cagggcatcctggtggaccgggacggcctgccggttcacactcgacaccagagactcatc
agtctgggcaaatgggtggccgacaaccagccggggctgatccagtgcagagcgagtgag
gacggcctcctcgtcttcatcaccgacattccggagcaggacatcgaggagccgcaggag
aaggacgcgccggtgctgcaggagtcgtccaacggcgagcagacgcccaacgacggcgga
aactccggcctgaagtcggtgctgtctgccgggaagacgcagagctcgtggcccgacggc
agcgaccggcccgtcgtcaccttcaaggagaacatcaagccccgagagcagggccgcgag
gccacacgaaaccatcacctgaaagacagcggcaaggagcgccgggacttcgccaaaggc
aacggggctgctgggaaagcagagctgaagagggacgggaagaggaagagcgagctgaaa
aaagccggtcacgagaaaaccacggacgccgggaaacaggtgaaggcgcagacggagctg
aggaagactccggtgtccgaggccaagaagacgcctgtcactcaaactcaaaccacctgc
tccaaccagttcatccccatccatcatcctggagccttcccacccctgcccagcagacca
ggtttccccccctcggcctacgtgatccctcccccggtgggcttcccggggcttcaggtg
aatccaggcttcaccttctccactggggtgtcggtcccgtccttccttcagccgggcgtg
cacacccaggccggcacccagggcgggaagccgtcccacattccctacagtcagcagagg
ccctctggtcccggtccgggtcaagggccggggtcctcgggcccgggccctatgaaccag
ggcccctcccagggtcagcagccccaggcgccctcccagcaggccttgcagcagtcggtc
cagctgcaggtgcaggcgatgagccagcagcagcagcagtctcccaccaaaccggtccag
caggtcgggatggggaagagtccacctcaccacccggggatgcagcagtacatgcaggtc
caggatcagccggcacagatgtggaaccaggctcaggccgctctgcagaagatttctccc
atgcagatgtccatgaagcagcagcagcctcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcaggccttttacatggcggctcaggatcccctcaagctgtacgagcac
cagctgcagccgcccaacatggacaagaagatcaagtaccccaacatgcaggatttctac
tgggagccgtcctaccggataggggacggtctggctgtgatggcagacaggataaagagg
cctccgcctggtgggatctgctctgagcaggacccgtccgccgggccccggggacccccg
tttgagctgccaaaccagaccaggatggagaacggccccgaggtcatcagccagtcttct
ctcctgccaatgtctggcttccccatgcaggagtacaaccagaacagcatcttcagtcag
gcctacggcaagaacctgccgcccagctccaagcccgacactcccatgatgcaccaggaa
ccatccctctactccctgttcgaagggactccctggtccccctccctccctgccagttca
gatcactccaccccggccagccaatccccccactcctccaaccccagcagcctgccgtcc
tccccgccgacacacaaccatggagccatgcctttctctaacttcgggcccataggcact
ccggacagccgggaccgcagggtggtggaccgctggaaggctgacaagaccggagcggtc
agcgggttcggtctggactacctgccggcgtcggcctcctctgcagcttcagacaacagc
tggcaccaggccggaccgcctggcagctcctgggccagtcaggagtctcctatggaggag
tcgtcctccaccgtgctgctcgacagcctcaagtcgatctggtcgagctccatgatgcag
ccgggcccgtcggcgctggagcagctcctcctgcagcagaaacagaagcagcagcgaggt
cacggcgccatgaacccgcctcactga
DBGET
integrated database retrieval system
