Micropterus salmoides (largemouth bass): 119902843
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Entry
119902843 CDS
T07309
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119902843 (fubp1)
03041 Spliceosome [BR:
msam03041
]
119902843 (fubp1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119902843 (fubp1)
Spliceosome [BR:
msam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119902843 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
119902843
NCBI-ProteinID:
XP_038575128
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGPQESIQAAKRLLTEIVEKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGDSLDVPVPRFAVGIVIGRNGEM
IKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGG
RGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPP
NADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGP
PGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPSNETGLCPDKAAAD
ANAAAWAAYYAQYSQQPQAPMTPTSGAPGTTQTNGQGDPQAAGQSGQADYSKAWEEYYKK
MGQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAAAASQPGGQPDYSAAWAEYYRQQAAYY
GTANPQTMGAAPQAPQGQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacagcagcgtggctccaccgtcctctaacgctggtggcggaatgaacgac
gcttttaaagatgctctacagcgagcacgacagattgcagcgaaaatcggcggtgacggc
gtcgcagcacccccaactaatgaatttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacaaagaaagtg
gctacaaatgatgccttttcagcaatgggaggaatgggtggccccccaaggtcaatatca
gaggaattcaaggttcccgatggaatggttggattcattattggaagaggaggcgaacaa
atatcacgtctgcagcaggagtctggatgcaaaatacagattgcacctgacagcggaggc
atgccagataggtcagtgacattaacaggaccacaggagtccatccaggcagcaaagagg
ctactcacagagatagttgagaaggggcgcccggctccagctttcaaccacaacgacggc
ccaggaatgactgtccaggagattatggtccctgcctctaaagccggacttgtcattggg
aagggaggagaaactatcaaaagccttcaggaaagagctggagtgaagatggtcatgatc
caagacggaccccaaaacacaggtgcagacaagccactccgcatttcaggagaacccttt
aaagttcagcaagccaaagagatggtgatggagctaatcagagatcaaggcttcagggag
cagaggggcgagtatggttcacgagttggaggtggaggcggcggcggcggaggagatagc
ttggatgttcccgtcccccggtttgcagttggaattgtcattggcagaaatggagagatg
atcaagaaaatacagaatgacacaggcgtccgaattcagtttaaaccagatgacggcagc
acaccagacaggatagcccagatcatgggcccccctgatcaggctcagcacgccgcagaa
atcatatccgatttgctgaggagcgtccaggccggtgggcctccaggacatggaggtggc
aggggtcgtggtcgcgggcaggggaactggaacatgggcccccctggtggcctgcaggag
tttaccttcactgtcccgacgatgaagactggtctcatcatcggaaaaggtggtgagaca
atcaagggcatcagccagcagtctggagccaggatcgagctacagaggaatcctccaccc
aacgccgatcctaacatcaaaatgttcacagttcggggctcccctcaacagatagactac
gccaggcagctggtggaggagaaaattgggggaccagtcactccaatgggaggcccacac
ggcccccctggtccacatggaggtccaggcccacatggtcctcctggaccaccaggcccc
ccaggtgctcccatgggtccatacaaccctggaccatacaaccagggccctccaggacca
catggtccacctgcaccgtaccagcctcagggatggggcaatggctacccacactggcaa
caaggacagccggatccaagtaacgaaactggcttgtgtccagataaagcagcagctgat
gccaacgcagcagcgtgggcagcctactatgcgcaatacagccagcagccgcaggctccc
atgaccccgacaagcggagctcctggcacgactcaaacaaacggccaaggtgacccacag
gctgcaggtcagagtggacaggcagattactccaaggcctgggaggaatattacaagaaa
atgggtcaacagagtcaacaacctcaggactacacgaaagcctgggaggagtattacaag
aaacaaggtcaagcggcccctcaggccacagcagcggcagcagcagcttcccagcctgga
ggccagccagactacagcgctgcttgggcggagtactaccgtcagcaggccgcttactac
ggcacagccaaccctcagacgatgggtgcagcaccacaagcccctcagggccagtaa
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integrated database retrieval system
