Micropterus salmoides (largemouth bass): 119902862
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Entry
119902862 CDS
T07309
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119902862
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119902862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
119902862
NCBI-ProteinID:
XP_038575171
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MGHKDHVEEGAGHILDLGLDLEYLHVAGADRQAGGADGASAMEEQGESSGNSSTANSPPP
AVAEENTGSDAECEPALSSSATLAAGPDPDEGEGGLTHSKNTHQPLCRTQCVDLGTEGPP
EPPSEVPSEFEHDNLARSSPSSPCKYPPEPPPNSSTSDPASEAGGKEYQAKLEFALKLGY
SEETVRLVLSKLGPDTLINDILGELVKLGTKSDSEAPAGSLASTSSTSSSSSSCGCSDLL
DGQRSDSPCPSDSLCDQDNLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDI
TVFVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYE
SDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKR
PVMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKNQGDTGL
VKSHSVPAGSIEAKKGAQKRQSDPSIRALSYSDAEEKLLAKGRVESQKNSMCGGSSSGSC
SGSITMSPAPGGGPPSGLSFPQEQQPRAATPHSLPAPSHDLYPHCESPDLSYYSVTRAYS
GLSLSSRRSPDCRFPNDTDLRIGSMGSAGSECSSESSVSCSSSCDSYSERLCPGCHPDTL
LEDTVHFANPHSRLYPHHAASNHELCSLHSADYGNIQHSHTSNTGAHNYHLIVARGQSCA
HDQPPPEAPPKRPLYPLPPHLQHQPLAARSSCPGDYHSLPQSNPHPPGSPLGSCLAPTRA
ESVSDSHLYEHLSTSRHHHRTKALPSWDTYYRQAPLPPSRYEPSAYQSLPDTRQSSWHPW
AQDGYAQHHSSHPALHPSPTHYLNHPPPPARSPHPPYQPHCAHLTVPSHAPPSYMSQHPE
SPAHSRYGDVREKVYMNLCNIFPSELVSRVMARSPHVTDPQQLAAAILAEKAQTGY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggccacaaggaccatgtggaggaaggagcaggccacatcctggatttggggctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggcggcgctgacggggcctct
gctatggaggagcagggggagagctccggtaacagcagcactgccaattcccctccaccg
gccgtggcggaggaaaataccgggtctgatgcagagtgtgagccggcactgtcttccagc
gccactctcgctgctggccccgacccggatgaaggagagggagggttaactcacagtaag
aacacccaccagccgctttgtcggacccagtgtgtggacttgggcactgaaggtcctcct
gagccgccatctgaagtcccatcagagtttgaacacgacaatcttgcccggtcctcaccc
agctccccatgtaagtacccacccgagcctccacccaattcctccacatcggacccagca
tccgaggctggcgggaaggaataccaggctaagctggagtttgccttgaagctgggctac
tctgaggagactgtgcgactggtgctgtctaagcttggccccgacaccctcatcaatgac
atactgggagagctggttaaactgggcaccaagtcagacagcgaggcgccggctggatca
ttagcctctacctcatctacttcatcctcctcttcctcttgtggctgttctgatttactg
gatggccagaggtcggactcaccctgtccttcagactctctgtgtgaccaggacaacctg
cggccagttgtggtggatggcagtaatgtagccatgagccatggcaacaaggaagtgttt
tcctgccagggcatccagctggctgtagactggttcctggagcgaggccatcatgacatc
acagtgtttgtgcctgcgtggaggaaagagcagtcccgccctgatgcccctataacagat
caggagatcttgcgtcgcctagagaaggaaaagatcctggtcttcactccgtcgcggcgt
gtccaaggccggcgagtggtttgctatgacgaccgcttcattgtcaaactggcctatgag
tcagacggcatcattgtctccaatgataactacagagacctggctaatgagaaaccagag
tggaagaagttcatcgatgagcggctgctcatgtactcctttgtcaatgacaaattcatg
cccccagatgaccctcttggtcgtcatggccccagcttagacaacttcctgagaaaaaga
cctgtcatgcctgagcagaagaaacagccttgcccatatggaaagaagtgcacttacggc
cacaagtgtaagtactaccacccagaaagaggtgctcagcctcagcgtgctgttgctgat
gagctgcgtgctagtgccaagacctgtgtcaccacaaaaaaccagggggacaccgggctg
gtgaagagccacagtgtgccagctggcagcatcgaggcaaagaaaggcgcccagaaaagg
cagtcagaccctagcatccgagctttgtcgtacagcgatgctgaggagaagctgctggca
aaagggagggtggaaagccagaagaacagtatgtgtggcggcagcagtagtggtagttgc
agtgggagcatcaccatgtccccagccccaggaggcggccctccatccggtcttagcttt
cctcaggagcaacagccgagagcagcgactcctcacagtctacctgcccccagccacgac
ctttacccgcactgtgagtctccagacttgagctattactcagtaacacgtgcctactct
ggcctgagcctttcctccaggcggagcccagactgccgcttccccaatgacacagacctg
cggataggctcaatgggctcagcaggctccgaatgcagcagtgaaagcagcgtgagttgc
agcagcagctgtgactcctacagtgagaggctgtgtcctggatgccacccagacacctta
ctggaagacaccgtccattttgctaatccccacagccggctgtatccccatcatgccgct
tcaaaccatgaactttgtagccttcattctgcagattatggaaatatccaacacagccac
acgtctaatacgggagcacacaactaccacctgattgtggcacgtgggcagagctgtgct
cacgatcagcctccgccagaggctccaccaaagcgccctctctaccccttgccccctcat
ctccagcatcagccgctagctgcacgctctagctgcccaggcgactaccactctctgcct
cagtccaaccctcaccctccaggctctcctcttggcagctgcctggcccccacacgagca
gagagtgtgtcagactcacatttgtatgaacacctctccacatcgcgccatcaccaccgt
acaaaagctttgcccagctgggacacgtactacagacaagctccattgccgccctccagg
tatgagccgtccgcctatcaaagcctgccagacactcgccagtcatcttggcatccgtgg
gctcaggacggctacgcccagcaccactcctcgcatccagctctccacccatccccaaca
cattacttaaaccacccaccgcctccagcccgctctcctcacccgccctaccagcctcac
tgcgctcaccttacagtgccctcccacgctcctccctcttacatgtcgcagcacccggaa
tcccctgcacacagccggtacggggacgtgagggagaaagtctacatgaacctgtgtaac
atcttcccctcggagctggtgagtcgggtgatggccaggagcccccacgtcacagacccc
cagcagctggcagccgccatccttgcagagaaagcccaaacaggctactga
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