Micropterus salmoides (largemouth bass): 119902889
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Entry
119902889 CDS
T07309
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119902889 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119902889 (prpf38b)
Spliceosome [BR:
msam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119902889 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
119902889 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
119902889
NCBI-ProteinID:
XP_038575200
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MANVGNQLPTQAVSKTAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIEWYDSFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKMIDQQMKARPRKVAQKETQEDEAAFTESGKQGERR
RSRTPRRTPSPRRSPKRSRSRSHHREKERHGPSFDRELERERDRQRKEREGRDRDRGDRG
ERERRRSRSADRNQDRRERRRSRSGSRDRRSERRDKERDGGDDKSRRKDREHHKDRGVER
EKSRDKKNRGETDDRRHKDDRERHREERKAKRSSRSRSREKRHKSGGEEKSRKRELSHSR
DKDRERDGAQRPHKRSRSKERSHHPRESSNDHSKHSERRRSQSTE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgtcggaaaccagctaccaacacaggccgttagcaaaactgccccaggaaaa
catggaaatgtattgcccctgtggggcaacgaaaagactatgaacctcaacccaatgatt
cttacaaatgtgttgtcttcgccatatttcaaagttcagctctacgaactaaagacgtac
catgaagttgtggacgaaatctacttcaaggtaactcacgctgagccctgggagaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgtggagttgggactggt
ggtattgtgtcgactgctttctgtctcctatacaaactgtttacactcaagttgactcgc
aaacagctgatgggtttgatcactcacacagactccccatacatcagagcccttggcttc
atgtacataagatatactcagcccccagcagatttgatagaatggtacgacagcttcctg
gatgatgaggaggagcttgacgtgaaggcaggaggcggctgtgtgatgaccatcggagag
atgctgcgctccttcttgaccaaactggagtggttctccacactgttcccccgtatccca
gtgcctgtgcagaaaatgattgaccagcagatgaaggctaggcctcgtaaggttgctcag
aaggagacgcaggaggacgaagccgccttcacagaatcagggaagcaaggggaacgacgc
cgctccaggacgcccagacggacaccaagccccagaaggtcacccaaacggtcaaggagc
aggagccaccaccgcgagaaagaacgccacggccccagctttgaccgagaactggagagg
gagcgtgaccgccagaggaaggagagggagggaagggatagggatagaggggaccggggg
gaaagggagcgacggcggtctcgcagcgcagacaggaaccaagaccgacgagaacgcaga
agaagccgcagtggcagccgggaccgcaggagcgaacgtagagacaaagaaagagacggc
ggggatgacaagagcaggaggaaggacagggaacaccataaagatagaggcgtggagagg
gagaagtccagggataagaagaacaggggagagaccgatgacaggaggcataaagacgac
agggagaggcacagagaagagaggaaggccaaaaggtcgagccggagtcgaagcagggag
aagagacacaaaagtggtggagaggagaagagcaggaagagagagcttagccacagcaga
gataaagacagggagagagacggagcacagcgtcctcacaaacgtagtcgtagcaaagag
aggagccatcatccccgagagtccagtaatgaccatagtaaacatagtgaacgcagacgg
agtcagagcactgagtaa
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