Micropterus salmoides (largemouth bass): 119902913
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Entry
119902913 CDS
T07309
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119902913 (sox1b)
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119902913 (sox1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119902913
NCBI-ProteinID:
XP_038575237
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGGGAGGKVPQDRIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSSAGVGMGGGQRLESPGGCHAGANAGYATHVNGWANGTYSGQVAA
AAAAAHAMMQEAQLAYTQHPGTGAHPHHPHPHHHPHHHPHNPQPVHRYDMSALSYSPISN
SQSYMSASPPGYGGITGYTHQHQSSGVSPVSGTIGGTLGSLVKSEPSVSPPVSTGRAPQP
CPTGDLRDMISMYLPTGEVAGDSSVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtggtgccccagaccaaccca
tccaacccggggggacacgcgggaggaggaggcgggggagccggtggcaaagtcccccag
gacagaattaagagacccatgaacgccttcatggtctggtcccggggccagcggaggaaa
atggcacaggagaaccccaagatgcataactcggagatcagcaagcggctgggcgcagag
tggaaggtgatgaccgaggcggagaagagaccattcatcgatgaggcgaagcggctccgg
gccatgcacatgaaggagcacccggactacaagtaccggccgcggaggaagaccaagacg
cttctgaagaaggacaagtactcgctggccggcgggctcctcggctcctctgcgggtgta
gggatgggcggcgggcagcggctggagagccccggagggtgccacgcaggagcaaacgcg
ggctacgccacgcacgtgaacggctgggcaaacggcacatactcgggccaggtggcggct
gcagcggctgcggctcacgccatgatgcaggaggctcagctggcatacacgcaacacccg
ggcaccggagctcacccgcaccacccgcatccgcaccatcacccgcatcaccacccgcac
aacccgcagccagtgcacaggtacgacatgagcgccttatcttacagccccatctcaaac
tctcagagctacatgagcgcctctccaccgggctacggcgggatcaccggctacactcac
cagcaccaaagctccggtgtctccccggtgtccggaacgatcggagggactttggggtcc
cttgtgaaatctgagcctagcgtgagccccccggtttccaccgggcgcgcaccgcagccg
tgccctacgggggacctgcgggacatgatcagcatgtatctgccgaccggcgaggtggcg
ggggactcctccgttcacagcagactgcacgtgctccacccgcagcactatcaaagcagc
ggctccactccggtaaacgggacggttcctctgactcatatttaa
DBGET
integrated database retrieval system
