Micropterus salmoides (largemouth bass): 119903228
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Entry
119903228 CDS
T07309
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04136
Autophagy - other
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119903228 (atg13)
04136 Autophagy - other
119903228 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119903228 (atg13)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119903228 (atg13)
Membrane trafficking [BR:
msam04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119903228 (atg13)
Atg1 complex
119903228 (atg13)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119903228 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119903228
NCBI-ProteinID:
XP_038575371
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERTAPIMGIIVDHFVDPPCSSQRPANMGHPCNYRYSDDE
DGGPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRISYQPPALAGAAELCHPVANQNQVLHAGKEGGVVLVPAHPPHGADANLTAEHSSNT
PGSSGDDDGLSQSGEARKDEGRSVSPSDPVESLNAFTRKIGAFVSKPSAQITAASLDLPF
AAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDD
LLPMDLGTFYREFQNPPQLTSLSLHISSQSMADDLDSLPEKLAVYEKNMDEFDAFVDMLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagactgtccaggtgattgtccaagctcgtcttggagagaagatatgcactcgc
tcgtcctcctcacctactggctctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcactggccgggcaacttccaggcattggacgttccatg
tgtgttgagatctccctaaagacgtctgagggtgactcaatggagttagagacttggtgt
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcgtatacagtctacaatcgt
ctgtctgtccttctgaaatctctgctggccatcaccagagtaacaccggcctataaactg
tctagaaagcagggacacgactatgtcatattatacaggatttactttggggaagtccag
ttgggtggattaggggaaggtttccaaacagtgcgtgtcggtgttgttggcacccctgtt
ggcacagtcacactttcatgtgcttaccgcacaaacctggcattcatgtccaacagacag
tttgagcgcacggctcctatcatggggatcattgtggatcactttgtggatcctccctgc
agcagccagcgtcctgcaaacatgggacacccctgcaactacaggtactccgatgacgag
gacggaggcccgtttgcaggggttcaggactcgcaagaagtctgcaccacctccttctcc
acctcccctccctctcagtgtgtgtgtacactgagtccctcgccctctaaactgtctaag
cccctcccactggacagtctgcagcttccattggctccgggacttgtcactcacaatctg
tatgcttccaggatatcttatcagcctccagctctagcaggagccgctgagctttgtcac
cctgttgccaatcaaaaccaggtgttgcatgctgggaaggagggcggggttgttttggtt
cctgcccaccctcctcatggagccgatgccaatctgacagcagagcactcctccaacacg
cctggcagcagtggcgacgacgacggcctgtcgcagagtggagaagcaaggaaggatgaa
gggaggagtgtttctccctctgaccctgtggagtctctcaatgcttttacaaggaaaatc
ggagccttcgtcagtaaacccagtgcacagataacagcagccagtcttgacctgccattc
gctgcatttgctccccgaggcctggactcagaggagaatgatcccatggtgcagcctcca
gactctcctccttgcccgtcaccccttcaggccagcctccattctcaggggtcagagggg
tcggggcagcaggacgactttgtcatggttgactttcgcccagccttctcgaaagacgac
ttgttgccgatggatctgggcactttctacagagagtttcaaaaccctcctcagctaacc
agtctctcactacacatcagctcccagtcgatggccgatgacctggactcactgccagag
aagctggccgtttatgagaaaaacatggacgagtttgacgcttttgtggacatgctccag
tag
DBGET
integrated database retrieval system
