Micropterus salmoides (largemouth bass): 119903461
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Entry
119903461 CDS
T07309
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119903461 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119903461 (clasp1a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119903461 (clasp1a)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
119903461 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
MMS19_C
ParcG
Dopey_N
HEAT_DAAF5
TAN
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
119903461
NCBI-ProteinID:
XP_038575572
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MMEPSMENCLAQVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAQVGTVLPSLIDRLGDAKDQVRDQDQTLLLKIM
EQAATPQYVWDRMLGGFKHKNNRSREGVCLCLIATLNTYGAHGLTLSKIVPHICNLLGDP
TSQVRDGAMGCLVEIYRHVGERVRMDLTKKGLPQSRLNVIFSRFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVVSSVRRPSSATTAKATAKEAAAGAVDEEDF
IKAFEDVPSVQFYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLLIAGAIEYEGF
PQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESVMPTLLNLVPNSA
KVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSAAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRGPTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFSTAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAST
SVVDSRGRSRAKVVSQSQPGSRSSSPGKLLGHGSYGRIPRATVSASSTPADKRSKIPRSQ
GCSRETSPSRLGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSRESSRDTSPA
RGFAPLASRRHSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVAD
ALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVA
EILNHCASSNWSERKEGLLGLQNLLKSQRVLSRVELKRLCEIFTRMFADPHSKRVFSMFL
ETLVDFVTVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNI
LMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSD
VRKTLQNWVSEELAGRSSTAALLSAEGNQEERCKQAAQVVLIALFELNTPEFTMLLGALP
KTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPSRHTPSRTSPLTSPTNCSHGGLSP
SRLWGWGVDGLSKHTPSPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTENMNSEEIYSS
LRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVSSSTGSDARLGLDMVEGGRTAL
DNKTSLLNTPSPRSFSGPRGREFAPYGYGETICTYDKSALKEAVFDDDVEQFRDCRRQES
GENKMMFPKVFAPGKVGHDHSDLVADLLKELSNHNERSEERKVALVELLKITREDSLSVW
DEHFKTILLLLLETLGDKDHTIRAMALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSH
KEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKDSLLQ
LLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKR
AQTTNSNSSSSSDVSSHS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggcccaggtcctacagaaggacatgggccga
cggctgcaggtgggccaagagatcattgattacatattggacaaggagaagtcccacgac
ctggagcaggatcagactgcactggacaagatggtggacggcattgccagctcctgggtc
aactccagcaacttcaaggtggctctgctcggcttggacctcttatctgccttagtgaca
aggttacaggagagatttagggctcaggtgggaacagttctgcccagcctcattgatcga
ttgggagatgcaaaagatcaagtgcgagaccaagaccaaacacttctgctaaagatcatg
gagcaagctgccaccccgcagtatgtgtgggacagaatgctgggaggcttcaaacataag
aacaacaggagcagagaaggcgtgtgcctttgcctcatcgccacgctcaacacatacgga
gctcacggcctgaccctcagtaaaattgttccacacatatgtaacctcttgggggacccc
acaagtcaggtccgggacggagccatgggctgcttggtggagatctacagacatgtggga
gagagggtcaggatggatctcaccaaaaagggcctgccacagtcacggttgaatgtaatc
ttcagcagatttgatgaagtccaaagatccgggaacatgatctcatcctctggctcagat
aagaactttgaggatgaagactctgtggatggaggccgatcctcctcctcgtcatcatcc
aaagcaccccctagtggcaggaggactgtagtgagctctgtaaggagacccagctcggcc
accacagctaaggccacagctaaagaagcagctgccggtgctgttgatgaagaggatttc
atcaaagcctttgaagacgtgccctcagtccagttctactctaacagagagctagaggac
cagctgaccaagatcagagaagtgctgtctgatgacaaacatgactgggagcaccgagtg
gttgcgctgaagaaggtccgttctctcttgatagccggggcgattgagtatgaaggtttc
cctcagcagctgcgtctcctggaggcccccctcaaattgtccgctaaagacctgcgctca
caggtggtccgtgaggcctgcatcacactaggacatttgtcatcattgctgggtaacaag
tttgaccacggagcggagagcgtcatgcccacgctgctgaaccttgtgcccaacagtgcc
aaagtcatggccacgtctgggatggccgccatccgcctcatcctcaggcacacacactac
ccacgtctcatccccatcatcaccagtaactgcacctccaaatcagcagcagtcagacga
cgctgttatgagttccttgacctcatgttacaagagtggcacactaatacactggaaaga
catgtagctgttctgactgagactatcaaaaaaggcatacacgatgctgactctgaggcc
cgctccatcgcaagaaagtgttattggggtttccatggtcactacagccgggaggcagag
cacctgttccaggcgctggagtccacctatcagaaggccctccagtctcacctgaagagc
tctgacagcatcgtgtctctaccacagtctgaccgttcctcgtcgtcttcccaggagagt
ctcaaccggccattgtctgtgaagagtgtcattggagggagcataacaaggagtaagctg
gtgagcaccagggggcctactacaccgggttccctccagcgctcccgtagtgacatcgat
gtaaacgccgcctccagtgccaagtcacgtctgtccacagttcctgcctcatcaccgttc
agcactgcagctgccctccccccagggtcctatgcctcactagatggcactcctggtaaa
agtgatggtcgtgttcgtacaaggagacagagctcgggcagcgtgggcggggccagtacc
tcagtggtggacagtagggggcgcagccgagccaaagttgtctcccagtcccagcccggc
agtcgctccagctccccaggcaagctgctggggcacggcagctacggccggatccctcga
gccacggtgtcggcctcctccacgccggcagacaagcgcagcaagatcccgcgcagccag
ggctgcagccgtgagaccagccccagccggctgggcctcgccagcctgtgtggtaaagct
cttcttcctgctgctcttccctaccgcacgctagcccggagccgcattccccgacccagc
atgagtcagggttgcagtcgcgacaccagtcgcgagagcagccgcgacaccagccctgct
cggggctttgctcctctggcctcccgacgtcactcccgttcaaccagtgctctctccaca
gctgaccctcacagccagtcagaccggtatggtttgattcaccaagcaagaatctctgcg
tcagtcaacgccatgagggtcctgaacactggcacagaggtggaggcagcagttgctgat
gctctgctattaggagactccaggaataagaggaagccgttgaggcggaggtacgaatca
ccggggatgtactctgatgatgatgccaacagcgacgcgtccagtgcttgctctgagcgc
tcatatggctcaaggaacggtggcatcccccattacctgcgccagacagaggatgtcgca
gagatcctgaaccactgtgccagctccaactggtcagagaggaaggagggcctgctgggc
ctgcagaatctcctcaagagccagagggtactgagccgagtggagttgaagagactttgt
gagatcttcacaaggatgtttgcagatccacacagcaagagagtgttcagcatgttcctg
gagaccctagtggacttcgtcacagtacacagggaggacctgcaggactggctttttgtc
ctgctcacccagctgctgaaaaagatgggggcagacctgctaggctcagtccaggccaaa
gtccagaaggccctggatatcacgagggagtccttcccatttgaccaacagttcaacatt
ctgatgagatttatcgtcgatcagactcagacacctaatctcaaggttaaggtggccatt
ttgaagtacattgagtccctggctcggcagatggaccccacagactttgtcaactccagc
gagacacgcctggccgtatctcgcatcatcacctggaccactgaacccaaaagttccgat
gtcaggaagacccttcaaaactgggtgagcgaggagctagctggcaggtccagtactgca
gccttactgtccgctgagggcaaccaggaagaaaggtgtaagcaggcggcccaggtggtg
ctgatcgctttgtttgagctcaacaccccagagttcaccatgctgctgggagcgctgccc
aaaaccttccaagacggagccaccaaactgctgcacaaccacctgaagaactccagcaac
accagcagcagtgtggggtctccgagcaacaccattggccggacgccgtcgcgccacacc
cccagcagaaccagccccctcacctctcccacaaactgttcccacggaggactgtctcca
agtcggttgtggggttggggtgtcgacggactgtcaaagcacacccctagccctcctcct
cctcctccgccccactccacccctgctgccccctccctaagggtcctgcgcagagcatat
tcacccagcatgatggagtatgacaccgagaacatgaactcggaagagatctacagctcg
ctgcgcggtgtcaccgaagccatccagagcttcagctaccggagccaggaggacctgaat
gagccaatcagacaggagggcaagagggatgatgcagcaggacgagaaggcgtgtcgtcc
tctactggctctgacgcccgcctgggcttagacatggtggaagggggccgcaccgcctta
gacaacaagacgtcactactcaacacgccatcacctcgctcgttctctgggccacggggc
cgcgagttcgctccttatggctacggagaaacaatctgcacatatgacaagagcgccctg
aaggaggctgtctttgacgatgacgtggagcagttccgagactgccggcgtcaggaaagt
ggtgaaaacaagatgatgttccccaaggtctttgctcctggtaaagtcggccatgaccac
tcagacctggtggccgacctgcttaaggaactgtccaatcacaacgagcgttctgaggag
cgtaaagtcgccctggtggagctgctgaagatcacacgtgaagacagcctgtctgtgtgg
gatgaacactttaaaaccattctcctcctcctgctggagaccctgggtgataaagaccac
accatccgtgccatggccctgcgtgtgctgaaagaaattctgaggaaccagccggcccgc
ttcaaaaactacgctgagctaaccatcatgaagaccctggaggctcataaagactctcac
aaggaggtggtgcgtgcagccgaggaggcggcgtccaccctggccggctccatccaccca
gagcagtgcatcaaggtgctgtgccctattgtgcagacagctgactaccccataaacctg
gctgccatcaagatgcaaaccaaagtcattgaacgcatcgccaaggactccttactgcag
ctgctgcccgacatcattcctggactcctgcagggctatgacaacacagagagcagtgtt
cgcaaggctagcgtgttctgtctggtggctatctactctgtaattggcgaggacctgaaa
cctcacctggcacagctaacaggcagcaagatgaagttactgaacctgtacatcaagcgg
gcccagacgaccaacagcaatagcagcagttcctcagacgtctcctctcacagctaa
DBGET
integrated database retrieval system
