Micropterus salmoides (largemouth bass): 119903715
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Entry
119903715 CDS
T07309
Symbol
nyx
Name
(RefSeq) LOW QUALITY PROTEIN: nyctalopin
KO
K08129
nyctalopin
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119903715 (nyx)
Proteoglycans [BR:
msam00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
119903715 (nyx)
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
119903715
NCBI-ProteinID:
XP_038575865
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
YLCLPSVLLLVSVLCLLPQAVLARWACVRACPASCSCTQEKSCIVLCDRSGLAELPKEFP
CEASAINLDKNKLKFLSERAFGTLPSLKSLSLDHNNISFITPGAFKGLSNLVELKMAHNE
YISYLHTRTFTGLKKLVRLDLSDANLFSIPDRIFIEQPALKELLLFQNNFRRIPGAFRGM
ENLTDIYLERNKIEAVAYNSLLGLGSLKYLNLQENRINVIHDRAFQDLVRLENFYLNDNL
LCTLPQLAFKGLSRLKMLNLGGNQLINVSKTWFSDLVELEVLYLDRNQLLYIXEGTFENL
TSLITLHLNSNNLTTLPFPVFQPIYFLARLYLFRNPWECDCSLEWLKEWMENYKLVRDIP
CASPSSVAGLDLSMVEFTKMNGTCVDPGELNLTTASLEIVSTTENRFNSLVSKLLQQELR
EEIGNGTESLRNGTLLDPEDELLSAGVGGQWAQASQPLLCFLVVWLIFGFIGQSYIHFCL
SCT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
tatttgtgccttccctctgtccttcttttagtctctgtgctgtgcctgctgccccaggcg
gtgctggcccggtgggcgtgtgttcgggcctgtccggcgtcctgctcctgcacgcaggag
aagagctgcatcgtgctgtgcgaccgctccggcctggctgagctgcccaaagagttcccc
tgcgaggcctccgccatcaacctggacaagaacaaactcaagttcctgtcggagagggcg
ttcggcaccctaccctccctcaagtccctctctctggaccacaacaacatctccttcatt
acccccggagccttcaagggcctctccaacttagtggagctgaaaatggcgcacaatgag
tacatcagttaccttcatacgcgaacgttcactgggctgaagaagctggtacgcttggac
ttgtcagacgctaacctctttagcatccctgatcgcatcttcatagagcaaccagcactg
aaggagctgctcctctttcaaaacaacttcaggaggatcccaggagccttcagaggcatg
gagaacctgactgacatctacctggagaggaacaagatagaggcggtggcatacaactcc
ctactgggcctgggtagtctcaagtacctgaacctccaggagaaccgcatcaacgtgatc
catgaccgggctttccaggaccttgtgcggctggagaacttctacctcaatgacaacctg
ctgtgtactttgccccagctcgccttcaagggcctcagccgcctcaagatgctcaacctt
gggggaaaccagttgatcaatgtgtccaagacctggttcagtgatctggtagagctggag
gtcctgtacctggacaggaaccagttgctatacatangagaaggcacttttgagaacctg
accagcctgatcacgctccacctgaacagcaacaacctcaccaccctccccttccctgtt
ttccagcctatctacttcctggcccgcctctacctgttcaggaacccctgggagtgtgac
tgctccctcgagtggctgaaggagtggatggaaaactacaagctggtccgcgacatcccc
tgtgcctcaccttcctccgtggcggggctggatctcagcatggtggagttcaccaagatg
aacggcacatgcgtggaccccggagagctgaacttgaccacggcctccttggagatcgtc
tccaccacggagaaccgcttcaacagcctcgtttccaagctgctccagcaggagctcaga
gaggagatagggaacggaacagagagccttcgcaacgggaccctgctggatcctgaagac
gaactgctctctgcaggggtcggagggcagtgggcccaggcaagccagccacttctttgc
ttccttgtagtgtggctcatttttggtttcattggccagtcatatattcatttctgtctt
tcttgcacatga
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