Micropterus salmoides (largemouth bass): 119903728
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Entry
119903728 CDS
T07309
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
msam
Micropterus salmoides (largemouth bass)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119903728
NCBI-ProteinID:
XP_038575873
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MPPLPVPLLLTLLQLVVFTYVSGGAYYGHKQHPQPYQQMQHLQHMGMGKEGFPQQQYLGK
EVPYMQYPHYRKELPQVPMHKGKENARKGGSYNGGQDKGQTIPSGAEGIPQGEPGPAGPP
GPEGPPGPPGPPGNGQPGPAGRPGPPGPPGVPAVGKPGLPGLPGKPGGNGEAGPQGEMGP
RGDEGPAGQPGPQGPPGPPGLPGIGKPGVQGLPGQPGPKGEPGHKGLPGLPGLPGPKGEK
GMGQPGQPGHKGLPGPPGPAGPRGLPGFGKPGLNGAPGPQGPPGEKGYPGDQGAAGPPGE
GGQPGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGLPGKPGLPGFGKPGLLGPKGDKG
MGGPPGSPGPKGDKGQGGLPGMLGPPGPNGPPGPPGLMGPPGGLGAPGPKGECGEGGPKG
LDGAQGDPGPSGIPGKDGLPGDRGEPGPRGPPGPSGAKGDDGHKGLPGTPGPPGLPGPKG
QSGLPGDMGPQGPKGIPGMDGAAGPLGPPGPPGPKGESGPPGPPGIVGEGSPGINGPIGP
PGKEGPSGPPGRPGQAGPPGPPGPPGPPSMSPDMAGVLSEMGPGLDGVKAGSYGKKGKYG
GNGAEVMGASGLEMPAFTAVATTPFPPVGTPVVFDKLLYNGRQNYNPQTGIFTCDMPGIY
YFAYHIHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAILPLQPGDTVYIQLPSD
QASGLYAGQYVHSSFSGYLLYPM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctccctgtccccttgctcctgacactgctacagcttgtagtatttacttat
gtgagtggtggggcatactacggacacaagcaacaccctcagccataccagcaaatgcag
cacctccaacacatgggcatgggcaaagaaggctttccccaacagcagtaccttggaaaa
gaggtgccctatatgcagtatccccactacaggaaggagcttcctcaggtgcccatgcac
aaaggcaaagaaaatgctcgtaaaggtggcagctataatggtggccaagacaaaggtcag
acaatccctagtggtgctgagggaattccccaaggagagccgggtccagctgggccacct
ggaccagagggacctccaggacctcctggacctccaggcaacggacagccaggacctgca
ggtcgacccggacctcctggtccaccaggagtgcctgcagtgggcaaaccaggtttacca
ggactgccaggcaagccaggaggaaatggtgaggctggaccacaaggagaaatgggccct
aggggtgatgaagggccagctggacagccagggcctcaaggtcccccaggaccacctggg
ctaccaggaataggtaaacctggggtacaaggattaccaggtcaaccagggcccaaagga
gagccaggtcacaaaggtcttccaggacttccaggattaccaggacccaaaggagagaaa
gggatgggccagccaggacaacctggtcacaaagggctcccaggtcccccaggaccagct
ggcccaagagggcttcctggttttggaaaacctgggttgaacggggcaccaggcccacaa
ggaccaccaggagagaaaggatatcctggagatcaaggagcagctgggccacctggtgaa
ggaggacagcctggcccaccaggtctacctggtcaaggaaagccaggtcaaaatggcctg
ccaggacagccaggcatgccaggtgggaaaggtcatccaggaccaccaggtttgccagga
aagccaggactgcctggatttggtaaaccaggtctcctaggaccaaagggcgacaaaggt
atgggtgggccaccgggatctccaggaccaaaaggagataagggtcaaggaggactccct
ggaatgcttggaccccctggaccaaatggtccaccaggtcctccaggccttatgggaccc
ccaggaggtttaggtgcgcctggtcctaaaggagaatgtggagaaggaggacctaaaggg
cttgatggagcccagggagaccctggtccatctgggatacctggtaaggatggtctgcca
ggagatcgtggagagccaggaccaagaggtccaccaggaccaagtggcgccaaaggagac
gatgggcataaaggtctacctggtacacctggtcctccaggacttcctgggccaaaagga
caaagcggattacctggtgatatgggacctcaaggtcctaaaggaatccctggaatggat
ggcgcagctggaccattggggcctcctggtcctccggggccaaaaggagaaagtggtcca
cctggtccaccaggcattgtaggtgaggggagtccaggtattaatggtcccattggaccc
ccagggaaagagggcccatcaggacccccaggacgaccaggtcaagcaggccctcctgga
ccaccaggcccacctggaccacctagtatgtctccggacatggcaggagtactctctgag
atgggccctggactagatggtgttaaggctggtagttatggtaagaagggcaagtatgga
gggaatggggcagaagtaatgggtgctagtgggttggaaatgccagcattcacagctgta
gcaacaactccctttccacctgtgggcactccagtcgtctttgacaagctcttgtacaat
ggtcgccaaaactacaacccccagacaggaattttcacctgtgacatgcctggcatttat
tactttgcctaccacattcattgcaaaggagctaacgtgtgggtggctttgatgaggaac
aatgagccagttatgtatacatatgatgaatacaaaaagggtttcctagatcaagcatca
gggagtgcaatattgcctctgcaacctggggacactgtgtatattcagctgccctcagat
caggcctcaggactttacgctgggcagtatgtgcactcttccttttccgggtatttgtta
tatccgatgtaa
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