Micropterus salmoides (largemouth bass): 119903882
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Entry
119903882 CDS
T07309
Symbol
fn1a
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin 1a
KO
K05717
fibronectin 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04810
Regulation of actin cytoskeleton
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119903882 (fn1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119903882 (fn1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119903882 (fn1a)
04810 Regulation of actin cytoskeleton
119903882 (fn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119903882 (fn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119903882 (fn1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119903882 (fn1a)
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119903882 (fn1a)
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119903882 (fn1a)
Membrane trafficking [BR:
msam04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119903882 (fn1a)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
119903882 (fn1a)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119903882 (fn1a)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
119903882 (fn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
119903882
NCBI-ProteinID:
XP_038576082
LinkDB
All DBs
Position
Unknown
AA seq
2501 aa
AA seq
DB search
MSGSTVARVLVALCIGSAVNCLPQGTRRTRRQGHHVXSVSQDGCQENGVFYRINEQWERR
YRDSTLVCTCHGVAGIKCKSKPEEEERCYDKTNQRSYTVGETYETHKDGMIWDCTCIGSG
RGKISCTIANRCHEGGASYKIGDTWRRPHETGGYLLECVCLGNGKGEWTCKPVSERCYDN
TAGASYVVGETWEKPYQGWMVLDCTCLGEGSGRITCTSRNRCNDQDTLTSYRIGDAWTKT
DAQGYQLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPVVYQPANVPELPQEGP
CRTDAGLTYFIGQRWIKNQGTKQMICTCLGNGVSCEQWDGPAPVYGGNSGGQPCVFPFVY
KGKTYHSCTSDGRSDGQLWCSTSSDFETDEKYSFCTEKNVMVATRGGNSNGALCQFPFLY
NGRNYTDCTAEGRRDGMKWCGTTTDYDTEQRFGFCPMAAHEEVCTTTEGVMYRVGDQWDK
RHDVLGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVDGLTYEVNQTFTKQHEEGYSMNCTC
FGQGRGRWKCDAIDQCQEPETRAFYQIGESWDKVIHGIMYKCYCYGNGLGELSCEPQQYP
GGHRPVQVVISESGNQPNSHPIQWNAPQSAHITQYILKWKVKNTSSPWREVIIPGHLNTY
TISGLKPGITYEGQLISVLRFGRREITRFDFTTNDGSLAPSQGETTPVPPMVDISESVTE
ITSSSFVISWVSASDTVSGFRVEYELSEQGQATGQPMVLDLPRTTTSVNINELLPGRKYT
VNVYEVTDSGDDNLIFTTSQTTAPDAPSDHEVEDVGETSIVISWEKPLAPITGYRVVYTP
SIEGESTELTLPDTATSVTLSDLRPGNLYNISIYAVEDSLESEPIFIQVNTAGDPLPDEV
ASPTDLQFFQVSDKKIVLTWTSPASEVSGYRVTAIPVDESGTPQREMTLPVSQNSYXEVS
QLQPGTLYRFSIYTIHNGQESLPLIGEQTTKPDAPTDIHFANVTEDSAVMLWYAPRAKIS
GYRLLLSVEGSNPKQLRLPARLTQYTLLNLKPDTEYTATLHAEKETTLSEGETAVFTTSP
AMGNAPHFSTDVTDTSIIISWTPVPHIGYKLTVRPSQGGEAPRDVTSDSGSIYVSGLTPG
VEYTYSIQPVINGHEQGTPITHRVVTPLSPPTDLNLESNPGTGDLTVQWNGANTPDITGY
RVTCTPTNGQQGNSVEEFVEAGQNSCILENLSPGVEYNISVVTVKDDMESVPISTTITPD
IPQLTDLSFRDVSDTSISLRWSPLNATAITGYRITVVAAGESVPIFEDMVMPTTGQYTVY
GLEPGIDYEISVITVTENGESEPTTVTQQTSVPAPTDLGFSKVGPDTMEITWLSPRVPNT
ADINNFLIRYHPIDDEDDSTETSVGSRINNVVLRNLLPNTEYLVSVVCVYEQRESSPLVG
TQKTTLDSPVGLRFSEVFTNSFTIHWLAPQSKITGYRIRYQMVSGGRAKDERLPPSRNHF
TLTGLTPDTEYLVNIFAVSGTQESLPLSGKQKTISDAPTDLEVLDSSPTSITVRWDAPPV
TVRYYRITHGESGGHSNPKEFTVPGSQSTATINNLKPGTEYTVTVYAVTGRGDSPASSTP
IYVTHMTGVDSPSEMEVMEVNDKSVTVRWSPAQGPIKGYRVTGVPRNGQGPSFTEVVAPD
QTEITFSGLMPTVEYVLSVYALGQDGESSPLVVNALTNVDHPKDLTFSDVDSTSLKITWD
SPEGIVTSYRVLYSSPEEGERELRPAPRADAESTVIYGLQPGTEYTVKVIALHDDTASTP
LVGTQATAISSPTNLQFSQVTPTSFTMRWSMPGQENRLTGLTGLTGYRVVVNPKDKSGPT
KEMNLAPDATQAHISGLMVATTYEVHVYALKNSLTSRPVKGEVTTLENISPPRRVRISDV
NDSSITLSWRSKTEIISGFLVEATPTSSSSGYVPIQKTIDADSRSYTITGLEPGTNYKIS
IYTLKGNGRSAPFTLTATTAKPVLIPPTNIRFTSLNPDSISFTWEPSRSPGVTGYYVTYE
EAGGLPHEVIPRPHASQIYTIINGLKPGTEYVIKIVALQGALRSIPLVGKARTQPAIDPL
LVPELPPLPVPHQPRTDILDVPDTFNDRIFDSNHVHLSGTSGQKQPGQQGQHIYTEYQSL
GPNNGLHGPYGGLKEGQRPTLREPLVYIPVAGPDGNRIPLVRVSDGPLPGLAFGFPDNET
ELPQEAQTITTISWQPVPQTSEYEVSCNPITHLEERGFQMRLPGSSNSATLIGLTSGASY
NVIVEAMRDGAKEKVLEEVITVGNAVPGDIPITTNRDVCYDTFTQTYHEVGSEWERMSET
GFKLWCRCLGLGSGHFRCDSSKWCHDNGNNYRVGEKWDRRAENGHMMSCTCLGNGKGEFK
CEPHESTCYDDGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGGHTDLEADLL
QPVRSDAFDRYRENALRKLNIQCPIECLRPELLADADSTSE
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagcaccgtagccagggtgctggttgcgctctgtatcgggagcgcggtgaac
tgtttgcctcaagggacgcgcaggacccggcgacaagggcatcacgtcncctcagtctct
caggatggttgtcaagagaatggcgttttctatcgcattaatgaacagtgggagcggcgg
tatagggacagcactctggtctgtacctgccatggagttgctggtatcaagtgtaaaagc
aaacctgaagaagaggaaaggtgctatgacaagaccaaccagcggtcctacactgtggga
gaaacctatgagacacacaaggacggcatgatctgggactgtacctgtatcgggtctggg
aggggcaagatcagctgcaccattgccaatcgctgtcatgaaggtggggcttcatataag
ataggtgacacctggaggagaccccatgaaactggaggctacttgttggagtgtgtctgt
ctgggcaacggcaagggagagtggacctgcaaacctgtctctgagcgttgctatgacaac
acggcgggcgcatcctacgttgttggggagacatgggagaagccgtaccagggatggatg
gtgctggactgtacatgtctgggagagggaagtggacgcatcacatgcacctccagaaat
cgctgtaacgaccaggatactctgacttcctaccgtattggagatgcgtggaccaagaca
gacgcccagggctaccaactccagtgtctgtgcactgggaacggccgaggggagtggaag
tgtgagcgacatgcttctcttcacaccactggcctaggcactggctctcgtgtgatcact
aacatccagcctgtggtctaccagcctgccaatgtgcctgagcttccccaggagggaccc
tgtcggacagatgcaggactgacgtatttcatcggccagcgctggattaagaaccaggga
accaagcagatgatctgtacttgtcttggcaatggagttagctgtgaacagtgggacgga
ccagctccagtatatggtggcaactctggaggtcagccctgtgtgttcccctttgtctac
aaggggaagacctaccactcttgtacctctgatggacgcagtgatggacagctctggtgc
tctacctcttctgactttgagaccgatgagaaatattctttctgcacagagaagaatgta
atggtggcaacacgaggcggtaattctaacggtgctctgtgccagttccccttcctctat
aatggccgaaactacactgactgtactgcggagggacgtagagatggcatgaagtggtgt
ggcaccacaaccgactatgatacagaacagcgctttgggttctgtcccatggctgcccat
gaagaagtgtgtacgaccactgaaggggtgatgtaccgtgtgggagaccagtgggacaaa
cggcacgatgttctgggtcacatgatgcgatgtacctgtgttggcaatggcagaggagaa
tggagttgtgtcgcttactcccagcttaaagaccagtgtatcgtggatggtctgacctat
gaggtgaaccaaaccttcaccaaacaacacgaagaaggctactcgatgaactgcacttgc
tttggacaggggcgtggacgctggaagtgtgatgccatagaccagtgccaggagccggag
acgagagccttctatcagattggagagtcttgggataaagtcatccatggaatcatgtac
aagtgctattgctatggcaacggccttggcgagctcagctgcgagccccagcagtatcct
ggtggtcatcgtcctgtccaggtggtcatatcagaatctggaaaccaacccaactcccac
cctattcagtggaatgccccacagtctgctcacatcacccagtacatcctgaaatggaaa
gtgaaaaacacttcaagcccatggagagaggtcataatccccggccaccttaacacctac
accatctctgggctgaagccgggcatcacctacgagggtcagctaatcagcgtgttgcgg
tttggacgcagagagatcacacgctttgacttcaccactaatgatggatcattggcacca
tcacaaggcgagaccaccccagttccgcctatggtcgacatctcagagtcggtgactgaa
attacctccagcagctttgtcatctcctgggtttccgcctcagacacagtttctggtttc
agagtagagtatgagctcagtgagcagggacaggcaactggacaacccatggtgctagac
ctgccccgtacaactacctcagtgaacattaatgagcttctacctgggaggaagtacact
gttaatgtctatgaggttacagatagtggagatgacaacctaatttttactacttcacaa
accactgcacctgatgctcctagtgatcatgaagtggaggatgtgggagaaacttccatt
gtgatcagttgggaaaaaccactggctccaatcactggctatcgtgtcgtctacacaccg
tcaatagaaggtgaaagcacggagctgactctccctgacacagcaacatctgtgactctg
agtgaccttcgacccgggaacttgtacaacattagtatctacgctgtggaggacagcctg
gagagtgagcctatctttatacaggtcaacaccgctggagatcctctaccagatgaagtg
gcttctcctacagacttgcagttcttccaggtgtcagataaaaaaatcgttctgacctgg
actagcccagccagtgaagtctcaggttaccgggtcaccgccatcccagttgatgagtct
ggtactccacagagggagatgactctgcctgtcagtcaaaactcctacnatgaagtgtca
cagctacagcctggaacactgtaccgcttcagtatctataccattcacaatgggcaggaa
agtttaccgcttattggggagcaaactacaaagcctgatgctcccacagatatccatttc
gccaatgtgacagaggacagtgctgtgatgttgtggtatgccccccgtgccaaaatctct
ggctaccgtctcctcctctccgttgagggctccaaccctaagcagctgcgcttgcctgcc
cgccttactcagtacaccctcctcaacctgaagcccgatacagagtacactgctacgcta
catgcagagaaagagacaacactgagtgaaggagagacagctgtatttactactagcccg
gcaatgggcaacgctcctcatttcagcacggatgtgacggacacgtccattataatctcc
tggactccagttccccacattggatacaagttgacagtacgtcccagtcagggcggagaa
gctcccagagacgtgacctctgactcgggaagtatttacgtttctggtctaactccggga
gtggagtacacctacagcatccagccagtcataaacggccatgagcagggaaccccaatc
acacaccgtgttgtcacacctctgtctcctcccactgatctcaacctggagtctaaccca
ggcacaggagacctaacagttcaatggaatggggctaatacaccagacatcactggctac
agagtgacatgcactcccaccaatggccagcaaggaaacagtgtggaggagtttgtggaa
gcagggcagaactcctgcatcctggagaacctcagtccaggagtggagtacaacatcagt
gttgttactgtcaaggatgatatggagagcgttcctatatcaactaccattacaccagac
atcccacagctgacggacctcagcttcagggatgtgagcgacaccagtatcagcctccgc
tggtcgccgctcaacgccacagccatcactggttacaggatcactgtggtggcagccggc
gagagtgtgcccatctttgaagacatggttatgccaacgactggtcaatatactgtctac
gggctggaacctggtatcgattatgagattagtgtgatcactgtgacggagaatggcgag
agcgagcccaccacagtcactcagcagacctctgtaccagccccgacggatttgggcttc
agcaaggtcgggccagacactatggaaatcacctggctctctccccgggtccccaacact
gctgatatcaacaacttcctcattaggtatcaccccattgacgatgaagatgacagtaca
gaaaccagcgtaggaagcaggattaacaatgtggtgctaaggaacttgctgcctaataca
gaatatctggtgagcgtggtgtgtgtttatgagcagagagagagctcgcccctcgtcggc
acccagaaaacaactctggattcaccagttggcctgcgtttctctgaggtcttcaccaac
tccttcaccatccactggctcgctccacagagcaaaatcactggataccgtatccgttac
cagatggtcagcggcgggagggccaaggatgagaggctgcccccctccaggaaccacttc
accctgaccggcctcacaccagacacagagtacttggtcaacatatttgcagtgagcggg
acacaagagagcctgccgctcagtgggaaacagaagacaatctctgacgctcccacagac
ctggaagtgctagactcctcccccaccagcatcactgtccgctgggacgcaccacctgtc
accgtgcggtactacaggatcactcatggagagtccggaggtcacagtaatcctaaggag
ttcacagtgcctggctctcagtccactgccacaatcaataacctgaagcctggtactgaa
tacactgtcactgtctacgctgtgactggtagaggagacagccctgcatccagcacacca
atctatgtcacacacatgacaggcgtcgactctccctctgaaatggaggtcatggaagtg
aatgacaagagtgtcacagtgaggtggagccctgcccaaggcccaatcaagggatacagg
gtgactggggtccccagaaatggacagggaccgtctttcacggaggtggtggctccagac
cagacagagattactttctcaggactgatgcccacagtagagtatgttttgagtgtttac
gctcttggacaagatggagagagctctccattggtagtgaatgctttaacaaatgtagac
catcccaaggacctgaccttctcagacgtcgactccacctcactgaaaatcacctgggac
agtcctgagggaattgttacatcttaccgggtcttgtattcaagtccagaggagggtgag
agagagctgcgccccgctcccagagcagatgctgagtccactgttatctatggtctgcaa
cctggcactgagtacactgtaaaggtcatcgctctgcatgatgacacagccagcacacca
ctggttgggacacaagccacagccatctcatcccccaccaacctccagttctcccaggtt
acccctacctctttcacaatgcgctggtctatgccgggtcaggaaaaccgactaactggg
ttaacaggcctcacaggctaccgtgtggtggtgaatccgaaggacaagagcggccctacc
aaggagatgaacttggccccagacgccacacaggcacacatctctggactcatggttgca
actacctatgaagtccatgtttatgccttgaaaaactctctaaccagcaggccagtcaaa
ggagaggtcaccactctggagaatatcagcccccctcgtcgtgtacgtatctctgatgtt
aacgactcttccatcactctgagctggcgctccaagacagaaatcatctctggcttcctg
gttgaggccacacccacctcctcttcttcaggctacgtaccaattcaaaagaccattgat
gctgactcacgctcatacactattacaggtctggagccaggcaccaattacaagatcagc
atctatacattgaaagggaatggacgcagtgcacctttcactctgaccgccaccacagcc
aaaccggtgctcatcccacccaccaatatccgcttcacctccctgaaccctgacagcatc
tctttcacctgggagccatcacgcagtccaggggttactgggtattatgtcacctatgag
gaagccgggggtttgcctcatgaagttatccccagaccccacgcaagccagatctacacc
attatcaatggtctgaaaccagggactgagtatgtcattaaaattgtggccctgcagggt
gctttgagaagcatacctctagtaggcaaagccagaacacagccagcgatagatccgcta
ctggtccccgaattaccaccgcttcctgttcctcaccaacccagaactgacatcctggat
gttccagataccttcaatgacaggattttcgactcgaaccatgttcacctgtctggtact
agtggccagaaacaaccaggtcagcagggccagcacatctatacagagtaccagagccta
ggccctaataacggacttcatggtccatatggtggactcaaagaaggccagagaccgact
ctcagagaacctctggtctacattcctgtagcaggccctgatggaaacagaatacccttg
gtcagggtgagtgacggtcctctgccaggtcttgcgtttggtttccctgacaacgaaaca
gagttgccccaagaagcacagacgatcacaaccatctcctggcaacccgttcctcagacg
tcagagtatgaggtgtcctgtaatcctattacacacctggaggaaaggggtttccagatg
cgtcttcctggcagctccaacagtgccacgctaattggattgacatccggagcttcctac
aacgtgatagtcgaggccatgagggacggggctaaagagaaggttttagaggaagtcata
accgttggcaatgctgttccaggtgacatccccatcaccaccaaccgggacgtgtgttac
gacacattcacacaaacctaccatgaggtgggctcagaatgggagcgcatgtctgagacg
ggcttcaagctgtggtgccgctgcctggggctgggaagtggtcattttaggtgtgattca
tccaagtggtgtcatgacaacggtaataactaccgcgtcggtgagaagtgggatcgccgc
gctgagaacggtcacatgatgagctgcacttgtctgggcaatggcaagggagaattcaaa
tgtgaaccccacgagtccacatgttacgatgatgggaaaatgtaccaggtgggaaaccag
tggcagaaggaatacctgggcgctatctgtacctgtacctgctatggaggacaacagggc
tggcgttgtgagaactgcagaagacccggaggacatacagatttggaagctgacctcctt
caacctgttcgttcagatgccttcgaccggtacagagaaaacgctctacgcaaactgaac
atccagtgtccgattgaatgcttgaggccagagttgcttgcagatgctgacagcacctcg
gagtag
DBGET
integrated database retrieval system
