Micropterus salmoides (largemouth bass): 119903973
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Entry
119903973 CDS
T07309
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119903973 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119903973 (bard1)
04121 Ubiquitin system [BR:
msam04121
]
119903973 (bard1)
03036 Chromosome and associated proteins [BR:
msam03036
]
119903973 (bard1)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119903973 (bard1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119903973 (bard1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119903973 (bard1)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119903973 (bard1)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119903973 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
zf-RING_5
Ank_KRIT1
zf-RING_10
PTCB-BRCT
zf-C3HC4_3
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
119903973
NCBI-ProteinID:
XP_038576239
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MDTDVPVQTKEWKNTKEAVANFRRLLLCSKCSNLMKDPVCLGTCEHMLCRFCAGPQAGDG
CVVCHSPAWVKDIQINRQLSSITQLFCSLESLLSPIEQPDSPPAETQTQPESLVIGQKKN
FKIWFSPRSRKVRCIVEKPSQATVPESRSSGDTATTQPDTITVQRQDLSVFNFISSSHSG
SSCSQRCEHESRSRKKRSAKKNAASKKVSVRGAPRTTRKQTKQKMKKNRLDAINQQWGIT
EEVDALKEKEQFCAEGARRSSKRVSFLSPDVTSDETQPDLPQRSTNELSPGSSTMRESLS
GSGVTVLNDQTQPGQSMSDSVLPHDKLSANDPIPSDNLEKQNNLSPSKHSSKRARMEDKV
ATLETTPKRPRASPGRKRKSQMSPAVLNPLSSTSPRCEKSIKTSREGDSPTVGRKSPCTG
RASVGQATSGSPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLHE
ACNLGHLAVVEMLVSSGALLNTPGYENDSPLHDAVRNGHPAIVKLLLKLGASQNVLNLYG
KRPADYTASLEMLEIFQEASEGAQYANTSLSPSASLSVVSDCVRRDETMVFLASKLSQPE
QHQLAKLGELLGGKIADTFSGSVSHVMVPEGHMPTTYSTLLGLLAGCWVVKFSWVEACLQ
AGKWMPEIEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKAPSKDELTKLLREGGGQ
LLARQPKPDSDVTQTLSAASYHALPGSDQALCTQYIIFDPQGPHKPTVVRRGKVWSAPST
WLINCITAFRLLPVPDPQMLV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatactgatgtccctgtgcagacaaaggaatggaagaacaccaaggaggcggttgcc
aactttcgacgactgctactttgttccaaatgctcaaatttaatgaaggatcctgtgtgt
ctaggaacgtgcgagcatatgctgtgcaggttctgtgctggcccccaggcaggagatggc
tgcgtggtgtgtcacagccctgcgtgggtgaaggacatccaaatcaacaggcagctcagt
agcatcacacagctcttctgcagtctggagtccctgctcagtcccatagaacaaccagac
tcccctccagccgagactcaaacacaacccgagagccttgtcattggacaaaagaagaac
ttcaagatctggttcagcccccgcagccgcaaagtacgctgcatcgtggagaagccttca
caggccaccgtaccggagagcaggtcttccggagatacagctacaacacagccagacacc
attacagttcaacgtcaggacttgtcagttttcaatttcatctcgtcctctcattccggc
tcttcttgttctcaaagatgcgaacatgaaagcagatccaggaagaagaggtcggctaag
aaaaatgctgccagcaagaaggtgtcggtgcgaggagcccctaggaccacacgaaaacag
accaagcagaagatgaagaagaataggctggatgccataaaccagcaatgggggatcacc
gaggaggtagatgccttaaaagaaaaggagcagttctgtgctgaaggggcaaggaggtcc
agtaaaagggtttctttcttaagccctgatgtcacatctgacgagactcagcctgacttg
ccacagaggagtactaatgaactcagccctggcagcagcaccatgagggagagtctctca
ggaagcggcgtcactgtactgaatgaccaaacccagcctggtcagagcatgtcagacagc
gtcctcccgcatgacaaattgtctgcaaatgaccccatcccatctgacaatcttgaaaaa
cagaacaacctatctccctcaaaacattcctcaaaaagagccagaatggaggacaaggtc
gccacattggagaccacgccaaaaaggcccagggcttccccaggcaggaagagaaaatca
cagatgtctccagctgtccttaaccccctgtcttcgactagccccaggtgtgaaaagagc
atcaaaacctcaagagaaggagacagccccactgttggtagaaaatctccctgtactggc
cgtgcgtctgttggacaggccacctcggggagccctgcagttatgaagaggaaccacaag
ggagagaccctgctgcatctagctgctataaagggagatgttgaggctgtcaaggaactg
ctggaccaaggggctgaccctaacctgaaggataatgctgggtggacacccctgcacgaa
gcgtgcaaccttggtcacctggcggttgtggagatgttggtctcgagtggagccctcttg
aatacacctggctatgaaaatgactcaccactccatgacgcagtgaggaatggtcaccca
gccatcgtcaaactgctgctgaagcttggagcctcgcagaacgtgctaaatctgtatgga
aaacggcctgcagattacacagcgagtctggagatgctggagattttccaggaagcctcg
gaaggagcccaatatgctaatacatctcttagcccttcagccagtctctctgtggtgagc
gactgtgtgaggagggatgaaactatggtgtttctggccagcaagctgtcgcagccagaa
cagcatcaactggccaaactgggagagctcctgggagggaagattgctgacaccttctct
ggctcagtgagccatgtcatggtgccagaaggacacatgcccaccacctactctaccctc
ctgggtcttcttgctggctgctgggttgtcaaattcagctgggtggaggcatgtctgcag
gcaggcaagtggatgcccgaaattgagcacgaagcgggagaaggcccccagcgcagtcgc
atcaacagatgtagcttgctcccaccactcttcgatggctgtttcttcttcctccttggc
tcctttaaggcgccttctaaagacgaacttaccaagctgctccgggaggggggaggccaa
ctcctggcccggcagcccaagcctgacagcgatgtgacacaaaccctgagtgctgcttcc
taccacgcactgccaggctccgaccaggccctctgcacccagtacatcatctttgacccc
caggggcctcacaaaccgacagtagtgaggcgaggtaaggtgtggtcagctccctccacc
tggctcatcaactgcatcacagccttccgcctcctccccgtgccggaccctcaaatgttg
gtctga
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