Micropterus salmoides (largemouth bass): 119904094
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Entry
119904094 CDS
T07309
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04145
Phagosome
msam04814
Motor proteins
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119904094 (dync1i2a)
09142 Cell motility
04814 Motor proteins
119904094 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119904094 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119904094 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119904094 (dync1i2a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
119904094 (dync1i2a)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
119904094 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
Nbas_N
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
119904094
NCBI-ProteinID:
XP_038576422
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEAEQLKDAALHQDDSDLEKKRREAD
ALLQSVGITSDIPVVPPPMSPTTKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSD
SELGRGTPKLGMAKVTQVDFPPRETVSYTKETQTPVMTQQKEEEEEEEEIAPSQPVVEIQ
TEKPDQKEEEEAPPHELTEEEKLQILHSEEFVNFFDHSTRIIERALSEHVDLFFDYSGRD
LEEKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSLQYPELLVASYNNNEDAPHEPDG
VALVWNMKYKKATPEYVFHCQSAVMSASFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQ
RTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSMELVFKQSKA
VAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITGIDCHTAPGPL
DFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPAVFACVDGVGHLDL
WNLNSDTEVPTASVTVEGNPALNRVRWAHSGREIAVGDSDGQVLVYDVGEQISVPRNDEW
TRFVRTLAEINENRDDAEELAAQRLAA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcagagcttgaaaggaagaagcaacgcttggcacaa
atcagagaggagaagaaaagaaaggaggaggagcgcaagaagaaagaggcagaacaattg
aaagatgccgcacttcaccaggatgattctgacctggagaaaaaaagacgtgaggctgat
gctcttctacagagtgtgggcataacctcagatattccagttgtccctcctcccatgtct
ccgactaccaaatcggcaggcacacccagtgaggcagggagccaggactctgatggagct
gtgggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgat
tctgagctggggcgaggaactccaaaactgggaatggctaaagtcacacaagtggacttc
cctccacgtgaaactgtatcctacacaaaagagacccagacacctgtcatgacccagcaa
aaagaagaggaagaagaagaggaagaaattgctccgtctcaaccggtagtcgagattcag
acagagaaaccggaccagaaagaggaggaggaagcacccccccatgagctgacagaggag
gaaaaactccagatcctgcactccgaggagtttgttaatttcttcgaccacagcactcgc
attattgagcgagccctatcggagcatgtggacctcttctttgactacagtggtcgtgac
ctggaggagaaggagggtgaaatccaggccggagcaaagctctctctcaacaggcagttc
atggatgagcgctggtccaagcatcgtgtcgtcacctgtctggactggtctttacagtat
cctgaacttctggttgcctcatacaacaacaatgaggacgctcctcatgagccagacggc
gtggccttggtgtggaacatgaagtacaagaaggctacaccggagtacgtcttccactgt
cagtctgccgttatgtcggcttcatttgccaagttccaccctaacgttgtggtggggggg
acatactcggggcagatcgtactatgggacaacaggagcaacaagaggaccccggtgcag
aggactcccttgtcagcagcagcacatacgcacccagtatactgtgtgaatgtggttggc
acccaaaacgccaacaacctgattagcatctccactgatggcaagatgtgctcctggagt
ctggacatgctctctcagccacaggacagcatggagctggtgttcaagcagtccaaagct
gtagctgttacctccatgtctttccctcttggcgatgtcaacaatttcgtggtgggcagc
gaggacggctctgtctacatgtcatgtcgtcatggaagcaaagcgggcatcagtgagatg
tttgagggccaccatgggcccatcacagggatcgactgccacacagccccagggcccctg
gacttctcccacctctttgttacctcctctttcgactggactgtcaagctgtggagcacc
aagaacaacaagccgctctactcatttgaagataactcggattacgtgtacgatgtcatg
tggtctccgactcaccctgctgtgtttgcttgcgtagacggagtgggccatctcgacctg
tggaacctcaacagcgacaccgaggttcccactgccagcgtgacagtagagggtaaccca
gccctcaacagggtccgatgggctcattctggcagagaaatcgctgtgggagactctgat
ggacaagttcttgtgtatgatgttggagagcaaatttcggttccacgaaatgacgaatgg
actcgttttgtccgcacactggcagagatcaacgagaacagagatgatgcagaggagctg
gcagctcagcgcctggctgcctga
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integrated database retrieval system
