Micropterus salmoides (largemouth bass): 119904156
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Entry
119904156 CDS
T07309
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119904156 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119904156 (mid1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119904156 (mid1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119904156 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119904156
NCBI-ProteinID:
XP_038576535
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRREHTIRESKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKSPGRFLCVGRDRSHQEA
HQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNASRQENKLVEECDLLINIIQQRRQ
IIATKIKEGKSMRLRKLAQQIAGCKQCIERSSSLITQADQTLKESDHTRFLQTAKSVCDR
VCMATASSQILLPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYDT
ITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YVFIVKAINQAGNRSSEPGKLKTNSQPFKLDAKSAHRKLRVSHDNLTVERDETSSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVLS
RCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDAGSLSFYDAVGSQHLHTFDIAFAQPVC
PVFNVWNRCLTILTGLPIPDHLEGTDYNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtctgagctgacctgcccaatttgtctggagctctttgaggacccg
ctgctcttgccctgcgctcacagcctttgtttcaactgtgcccatcgcatcctggtctca
cactgcacgcccagtgagccaatccagtccatcagcgcctttcagtgcccaacctgtcgc
tatgtcatcacccttaaccagaggggcctagagggactgaaacgcaacgttacattacag
aacatcattgaccgctaccagaaggcttctctaagcggacctaactcccctaacgaaact
cggcgtgagcacactatccgcgaaagcaaagccatgacatctcccggtgaccgggtgcag
tgtcagttctgtgagcaggatcctccgcaggatgccgtgaagacttgcgtcacctgcgag
gtgtcatactgcgacgagtgtctcaaggccacccaccccaacaagaagcctttcacgggc
caccgtctaatcgagcccttgctggactctcatctgcgagggctcatgtgtctggagcac
gaggatgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcactgtgt
aagctggttggccgacaccgggaccaccaagtggcagccctcagtgacagatatgacaaa
ctcaagaaatctcctggccgctttctctgtgtggggcgtgatcgttcacaccaggaggca
caccagcaagccttggattccaacctcagcagtctaatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgtcaacatgtggaggtaaatgcatcgcgacaa
gaaaacaagctggttgaggagtgtgacctgctgattaatatcatacagcagcgaagacaa
atcatagctactaagataaaggaaggaaagtctatgcggttgaggaaactagcccagcag
atagccggctgtaagcagtgcatcgagaggtcctcctccctcatcactcaggccgaccaa
acgctcaaagagtcagaccacactcgcttccttcaaacggctaaaagcgtctgtgaccga
gtttgtatggcaacggcatcctctcaaatcttgttaccagaaattaacctgaacgacacc
tttgatacttttgctttggacttcacaagggagaagaaaatgctagaaagcttggattac
ctcactgcaccaaatccaccagtaatccgtgaggaattatgtacagcttcatatgacacg
atcacagttcactggacatcagatgacgaattctctgttgtatcgtatgaacttcagtac
gccatcttcaccagccaatctaatgttgtcagtttgtgtaactctgctgatagctggatg
attgtaccaaacatcaagcaaaatcactacactgtgcatgggctccagtgtggcaccaag
tacgttttcatagtgaaggccataaaccaggctggaaaccgcagcagtgaaccggggaag
ctcaagaccaacagtcaaccattcaagttggacgcaaagtcagctcaccggaagcttcgg
gtgtcccatgacaacctgacagtggagcgggacgagacatcatccaagaagagccatagt
caggaccgcttctccagccacagcagctacggggtcacaggaaatgtctacatcgacagc
ggccgccattactgggaagctctgataggaggaagcacatggtttgcagtgggaattgca
tacaagtcagcaccaaaacatgagtgggtcggcaaaaattccgcttcctgggtactgtct
cgatgcaacaattcatgggtggtgcgtcacaacagtaaggagatgcccatcgagccttca
ccccatctgcggcgcctcggagtattgttggactatgacgctggatctctgtccttctac
gacgctgtcggctctcagcacttgcatacatttgacatcgcctttgctcagccagtctgc
cctgtgttcaacgtgtggaacaggtgtttaacaatcctcactggactgcccatcccagac
cacttagaggggaccgactacaacaactga
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