Micropterus salmoides (largemouth bass): 119904298
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Entry
119904298 CDS
T07309
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119904298 (aff3)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119904298 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
119904298
NCBI-ProteinID:
XP_038576789
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MPTVLVGKGKLSIVSFLLRCAYSQVTRSQHNSCAKDILEDMTQSWTSQQALGGDQAQRIL
YNPKEAKLPTTQQRQSRGDVQLRMTRHPRVAPHKSMLADDLKLSSDDDDSQRASHESASW
DGHSLSAQRAHTHGRRVRHSSSDSSCSDSTAESGSSSLHSRSPSRSPEVHPYPASPANTH
PPLGGKETDPPSAAQWQLDKWLKKKSISEQDPSQSIPGRLPSPHTQRAPSPARSWNSNQE
YSPSQSPIPSPQFNYSHHSSPLPSPGYSFCPSPSPFPSTCPSPTPSPRHTPVPSPVPSVC
PSPCGSPRASRSPSPIPRDPPRSPSPSLPAPSRVRHYPEFQSQNQTQPSLTTNPHKTKNR
SWISHDTDTKSKPTNSTHLQPPHHHRPKTWPTRGQDQSQSKSKVSAVSNSNESHSHKSRP
KPNIHPTSKQLAEAPKAKHTSHSEHIQSSRSNHNSNHKPRPLFQASSQHSPTTAKRLVPT
NRETNSGHSQSTSKAATNSNTGLNARSNPSLKPRTKSWEATAPTPVHVNHSKPTQKKPQS
KEQEVEHRENNLTQAEGKKPESKDDRHREKQKGKPERKEDRRLAEEQLLRRPWIQSSTEE
EEEEEEEEGVIERQRKREETARGENRRSKEQQHRREWQTVQAKQRLPANTERHGLQDNSH
HQGRTKKGGRSEEDKELQQDPSPPPSRSPSPRRPSSSSSASSSSKSDSESEYQASITKVP
ADSTSHKRLTKRRQQGPGRPDTNRPKVVHPRGPTSGNPSEGQQSEGKQKLYTLVPFGRSD
KATASSQRGLRNLVVQIDLCLLKRVPDSTTGSTVKKPASSSSSSSTKDKQKEAMKHLYVP
ETVTKDSKRKRKLENGVSHRESKRSIPNTNDLSGHIESPSHTAEHNFVTETTHNGYLEEY
LDSKRPLSPLSPLSDSPESTKPPAKTKTSEQHHVHVHKNRDKNRDSAIKPKMEVDCVKVS
RQPQPPTESWGPAGHRGAVPNHETPHHAEYYLHEAKRIKHRADAMVDKLGKAVNYIDAAL
SFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLA
LLYWQMFRLKKDHALKYSKVLLDYFKSSPKVPSTPPCWNDSGKGTGGPPSSLSPNAKHSI
SIPQRIHQMAANHLNITNCVLYSYEYWEVADNLAKENKEFFNYLNTLSGPLTLHSSIAHA
VQYTRQALQWIRISAKLN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtccttgttggcaaagggaaactttccattgtcagttttctactccgatgc
gcatattctcaggtaacaagaagccaacacaacagctgtgccaaagacattctggaagac
atgactcagtcttggacgtcccagcaagccttagggggggaccaggcccaacgaatcctt
tacaaccctaaggaagcaaaactaccgactacacaacaaaggcaaagtcggggggatgtt
cagctacgaatgacccgtcaccctcgcgtagcacctcacaaatccatgcttgctgatgat
ctgaagctgagcagtgatgatgatgacagtcaaagggcaagtcacgagtcagcttcctgg
gatggacacagcctgtcagcacagcgagcgcacacacatggcaggcgggtgagacattcc
agctcggactcctcatgctcggactccactgctgagtcgggcagcagtagccttcactcc
cggagccctagccggagcccagaggttcacccatatcctgcatcgcctgccaacacacat
ccaccactcggcggcaaagagactgatccgccctctgctgcccagtggcagttggataaa
tggctgaagaaaaaatctataagtgaacaggacccttcccagagcattcctggacgcctt
ccctctccccacacccaaagagccccatctccagccagatcgtggaacagcaatcaggaa
tacagccctagccaaagccctattcccagcccacagttcaattatagccaccacagtagc
cccctacctagccctggttatagcttctgccctagccccagcccatttcctagcacctgc
ccaagtcccacccctagcccaaggcacacccctgttcccagtccggttccaagtgtttgc
cccagtccgtgtgggagcccaagagccagccgtagccctagccctatacctagagaccct
ccaagaagccccagtcccagcctacctgctccatccagggttcgtcactatcctgagttt
cagagtcagaaccaaacacaacccagcctaacaaccaatccccacaagacaaaaaatagg
tcatggatttcccatgacaccgacaccaagagcaagcccacaaacagtacacatcttcaa
ccacctcatcaccacaggcccaagacctggcctacacggggccaagaccaaagccaaagc
aaatccaaggtttctgctgtttcaaactctaacgagagccacagccacaaatctagaccc
aagcctaacattcatccaacatcgaaacagcttgctgaggctccaaaagccaaacataca
tcacattctgagcacatccaaagtagcagatctaaccataactccaaccacaagcctagg
cctctgtttcaagctagctcacaacatagccccacaacagcaaagcgcttggttcccact
aatcgtgaaaccaactcgggtcattctcaatctacctctaaagctgctactaattctaat
actgggttgaacgctagatcaaaccctagtctgaaacctaggaccaagtcttgggaggct
acagccccaactcctgtgcatgttaaccattcaaaaccaacacagaagaaaccacagtcc
aaggaacaggaggtggaacacagagaaaataatctgacccaagcagaggggaaaaaacca
gagagtaaagacgacagacatagggaaaaacaaaaagggaaaccggagagaaaggaagac
aggaggctggcggaggagcagctactgagacgtccctggatccagagttcgacggaagaa
gaggaggaggaagaggaggaggagggagtgatagagaggcagaggaagagagaggagaca
gcaagaggggaaaacaggaggagtaaggagcagcaacatagacgcgaatggcaaacagtc
caggccaaacagagactgcctgccaacaccgagcgacacggccttcaagacaactcacac
caccaggggaggacaaaaaagggaggaagaagtgaggaggataaagagttacaacaagac
ccatcaccccctccgtcacgttccccatctcctcgtcgaccatcctcctcatcctctgcc
tcctcctcttcaaagtccgattcagaatctgaatatcaggcttcgatcaccaaagtccca
gcagactctacctctcacaagagactcaccaagagacggcaacaaggcccaggcagacct
gacaccaacaggccaaaggtggtgcaccccagaggacccacctcaggtaatccaagtgag
gggcagcagagtgaggggaagcaaaaactctacaccctggtcccattcgggcggagtgac
aaggctacagcgtcttcccagcgagggcttagaaatctggtggtgcagatagacctctgt
cttctcaaaagggtcccggacagcactactggttccactgttaaaaaacccgcctcttct
tcctcctcttcgtcaaccaaggacaagcaaaaagaggcaatgaaacacctgtacgtccct
gagactgtgacaaaagacagcaaaaggaaacgcaagttggagaatggtgtgtcacacaga
gaaagcaagaggagtattcctaatacaaatgacctctcaggccacatagagtccccatct
cacacagctgagcataactttgtgactgagaccacacacaacgggtacttggaggagtac
ttggacagcaagaggccattgtctcccctgtccccactgtccgacagtccagagtccacc
aagcctcctgctaaaacaaagacttcagagcagcatcacgtccatgtgcacaagaacaga
gacaagaatagagattctgctataaagcccaaaatggaggtggactgtgtaaaagtgtca
agacagccacaaccaccaaccgagtcctggggccctgcaggacaccggggggccgtgcca
aaccatgaaactccacaccatgctgagtactacttgcatgaagctaaaaggattaagcac
cgtgcagacgcaatggtggacaagctggggaaggctgtgaactacattgacgctgctctc
tccttcatggaatgtgggaaagcaatggaggaagggccactagaggcaaagtctccttat
accatgtactcagagacagtggagcttattaggtacgcaatgaggctgaagagccactcc
ggccctggggcgagacaggaagacaaacagctggcggttctgtgtttccgatgccttgcc
ctcctttactggcaaatgtttcgtttaaagaaggaccatgcactgaaatactccaaagtt
ctgctggactactttaagagttctcccaaagtgccttctacaccaccctgttggaatgac
tctgggaagggtacaggaggacccccttcttcactctcacccaatgccaaacacagcata
agcattccccaacgtatccaccagatggcagcaaatcacctgaacattacaaactgtgtg
ctgtacagctacgagtactgggaggtggcagacaacctggcaaaggagaataaagagttc
ttcaactacttgaatactttgtctgggcccttgactctccacagcagcatagctcacgca
gtccagtacacaagacaggctcttcagtggatacgcattagtgccaaacttaactaa
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