Micropterus salmoides (largemouth bass): 119904302
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Entry
119904302 CDS
T07309
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
msam
Micropterus salmoides (largemouth bass)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119904302
NCBI-ProteinID:
XP_038576798
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search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NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggtggtctacctactcatcacagtgtcccagttgtgtttattacacatggtccagggt
ggggcgtattatggacataaacagccgcctcaacagcaccagcccttgccgcagtataat
gatgggtatcctcagcaacagtttctggggaacgagatgccacacctgccatttggcaaa
gaagggccattactgcctcagtatgggaaagagcttcctcagttgcctttgcaaatgggc
aaagagaggccactgactgaaggcaaaggacaaacattccccagaggggctaaaggtcca
ccaccccctggtcctggtggagaaggtttcagagaaggaccacaaggagttcagggccct
ccaggaccaacaggaccgccaggaccacaaggcccccctgggctgccaggccaaggaatc
ccagggttaccaggaaagccagggcctcctggtccacaaggctacccaggaattggaaaa
cctggcatgccaggaatgccaggaaaacctggaggacccggattactaggactgaaaggt
gaccttgggcctagtggtggtgaaggaccaactgggcttcctggtcctccagggctccca
ggtccccctggactcccggggatttcaaaaccaggaggtcagggggttcccggaccgaca
ggtcttctaggggagcctggccaaaaaggtctacctgggcttcctggtcttccaggcccc
aagggagacaaaggacttggtatacctggcttgccaggcttgaaaggacctggtgggccg
ccaggtccacctggaaatgtgggtatccctggggttggtaaacctggcctgaatggtctc
cctggacagccagggttaccaggaaagcctggtccttctggagaaccaggacaggcaggg
ccacctggtgaaagaggccaaccaggaccaccaggcttgccaggaattggaaaaccagga
aaagatggtttcagagggcaaccagggctctctggagggaaaggggaaccaggacctcaa
ggtttaccaggaggtccaggcatgccaggctatggtaaaccagggtttccaggacctaag
ggccacaagggacatgctggtctccctggacctccaggccttaaaggtgataaaggtcat
ggaggtcttccaggggtcattggtcccactggtcctagtggcatccctggcccaccaggt
ccaatagggcttcctggtagcactggcttcccagggcaaaagggagaggatggtgttggg
ggacaaaaaggatatccaggaatgaagggtgatttagggcctccaggtcttccaggacat
ccaggtttgtcaggagatggtggacaaccaggaccaagaggttttcaagggcccattggc
cccaaaggagaacctggtattaggggttcacctggtgcccctggtgctggaggattacct
ggaccaagaggagaggggggacaacccggagagaaaggccaccaaggaccacaaggcatt
ccagggcttacaggaccagggggaccaattggacctcccggactaccagggcaaaaaggc
gaaacaggtctgcctggtaaacctggctatcctggtgagggaaagccaggactccctggt
cttattggtcctcaaggtaatcctggcccaagtggccccgctggacttccagggcaacca
ggacagcctggaccccctggtcctccaggacaacctgctgcatctcctgaacttggacag
atcctccccatgactggcccatatagtggccaaaaacagggttacaagaagccaaagaat
ggaggcgacattggtggaagtagcctggagatgcctgcattcacagctaagctcacaaat
ccattccctcctgttggctctcctgtcatctttgacaaactcctgcacaatggcaatcag
gactacaatccccaaactggtattttcacttgtagcataccaggggtctactactttgct
taccacgttcactgcaaaggaggtaatgtgtgggtggcactgatgaagaacaatgaacca
gtaatgtacacatatgatgaatacaaaaagggcttgctggatcaggcatcagggagcgct
gtactcccattacgacaaggagacactgtgcatatacagctgccatctgaccaggctgca
ggactttatgctggtcaatatgtccattccacattttctgggtacttattgtacccaatg
taa
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