Micropterus salmoides (largemouth bass): 119904307
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Entry
119904307 CDS
T07309
Symbol
trim13
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing 13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119904307 (trim13)
04121 Ubiquitin system [BR:
msam04121
]
119904307 (trim13)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119904307 (trim13)
Membrane trafficking [BR:
msam04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
119904307 (trim13)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119904307 (trim13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
AcylCoA_dehyd_C
Spc29
Motif
Other DBs
NCBI-GeneID:
119904307
NCBI-ProteinID:
XP_038576808
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MIALHCASQQLDTMEQLEEELTCPICCGLFEDPRVLLCSHSFCKKCLEGLLEGNRGPAFR
TPFKCPTCRKETPHNGANSLQINYSLRGIVEKYSKIRVMPKMSVCKQHCGQPLNIFCATD
LKLICGFCATIDDHKGHKFCSLEEAYEREKEAFEELLRGVENWQSADILSCLETLQASKK
RALQSVTKDAEKVTDYFDKLTSSIECKKNEILSDFETLKLVVMQAYDPEITKLSAAMEEQ
RRALSIAESFRSVSDPLCFLQQMQEFREKFKVLKETPLPSRKDMDVGPLVRNFDVKKWDS
LRLREVDKISVPHESGSYRAGGSRMAAPRWITLFMSLLLATLLLLLPPHNLAAYVPSQIE
PFLPAVSSHLTHTGVYLREMTDMCTSLIVAGQECVMNLIYSAVSFIGSCKLF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgttgcactgtgcgtctcagcagctggacaccatggagcagctagaggaggaa
cttacttgcccaatctgctgcggtctcttcgaggacccgcgggttttgctgtgctcacac
agcttttgcaagaaatgcttggagggactcttggaagggaaccgaggtccggctttcaga
acacctttcaaatgtcccacatgccgcaaagagacccctcacaacggcgcaaacagtctg
cagatcaactattctctacgcggaatagtggagaagtacagcaaaataagggttatgcct
aagatgtctgtttgtaaacaacactgcggccaacctctaaacatattttgcgccacagac
ttaaaactcatttgtgggttttgcgcaacaatagatgaccacaaagggcataaattctgc
tccttggaggaggcatatgaacgagagaaggaggcgtttgaagagctgcttcgcggggtg
gagaactggcagagcgcagatatcctgtcctgcctggagacactacaagccagtaagaaa
agggcgcttcagtcggtgaccaaggatgcagaaaaggtaaccgactatttcgacaaactc
accagttccattgaatgcaaaaagaacgagatcctctccgatttcgaaacactgaagcta
gtggtgatgcaagcatacgacccggagatcacaaagctgagcgcagcgatggaggagcag
agacgggcgctcagcatcgccgagtctttcaggagcgtctccgaccccctgtgctttctg
cagcagatgcaggagtttcgggagaagtttaaagtccttaaggagaccccactgccttct
cggaaagacatggacgtcggtccccttgtgcgcaatttcgatgttaaaaagtgggactca
ctgcggctcagagaagtggacaagatctcagtcccccacgagagtggctcctaccgagca
gggggctcacggatggcagcgcctagatggatcaccttatttatgagtttgttactggca
acactgctcctgctgctgccgccgcacaaccttgcagcctacgtgccctcgcagattgaa
ccatttctccctgcagtgtcctcgcaccttacccacaccggtgtgtacctgcgggaaatg
actgacatgtgcacaagtttaatagttgcaggtcaggaatgtgtcatgaacttaatttac
tctgctgtcagttttattggaagttgtaaattgttttaa
DBGET
integrated database retrieval system
