KEGG   Micropterus salmoides (largemouth bass): 119904382
Entry
119904382         CDS       T07309                                 
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119904382 (sox1a)
Transcription factors [BR:msam03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    119904382 (sox1a)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1 TM_HPP
Other DBs
NCBI-GeneID: 119904382
NCBI-ProteinID: XP_038576937
LinkDB
Position
Unknown
AA seq 287 aa
MYSMMMETDLHSPGPQTNTTTGQTGPNGGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGSGVGLGVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQAMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSISPFME
NT seq 864 nt   +upstreamnt  +downstreamnt
atgtatagcatgatgatggaaactgacctccattcccccggcccccaaacgaatacgacc
acgggtcaaacggggccgaacggcgggtccaaagcgaatcaggaacgggtgaagagaccg
atgaacgcgttcatggtgtggtcccgtgggcagcggaggaagatggcacaggagaacccc
aaaatgcacaactctgagatcagcaaacggctgggggccgagtggaaggtgatgtccgag
gctgagaagcgccctttcatcgacgaggcgaagcggttgcgagccatgcacatgaaggag
catccggattacaagtaccggccaagacggaagaccaagacgctgctgaaaaaggacaaa
tattcacttgccggtggactgctttctgggcccagtgggggcagtggagttggtttaggg
gtcgggatgagttcttccggtgttgggcagaggttagagagccccgggggtcatggaggc
tctgcaagctccggctacgcgcacatgaacggctgggcaaacggtgcgtactcggggcag
gtggctgcagccgcggcggcggcagcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggagcgcaccaccaccaccactcacaccaccatcactcacacaacccc
caagccatgcaccgctacgacatgacagccctgcagtacagtcccatctcgaactctcag
agctacatgaacgcttctccatccggctacggcgggatcacctacacacagcaccagggc
tccggcgtctcctcctcagctgccatggggacgttagggtcgctagtgaagtcggagccg
agtatttctccattcatggaatag

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