Micropterus salmoides (largemouth bass): 119904476
Help
Entry
119904476 CDS
T07309
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119904476 (ift88)
Cilium and associated proteins [BR:
msam03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119904476 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_7
TPR_14
TPR_16
TPR_11
TPR_9
ANAPC3
SNAP
TPR_17
ARM_TT21_5th
TPR_CcmH_CycH
TPR_10
TPR-S
ARM_TT21_4th
DUF2225
MIT
ARM_TT21_C
HAT_PRP39_C
ARM_TT21_N
ARM_TT21
Consortin_N
TPR_MalT
ARM_TT21_2nd
RNPP_C
SHPRH_helical-1st
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
119904476
NCBI-ProteinID:
XP_038577098
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSISLHHLPREGEMENVHLAVEEDDIYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRP
PMTARFPGTAIGARPLASSFGSRIPMASSMGRPMTGAVQDGAARPMTAVRAAGYTSSLTR
GSNFDPLGQSRGPAPPLEAKNEDTPEEKIKILEKKVNDLIEESCMAQSIGALQLALEKAK
EAGRKERALVRQREQSGNAEHINLDLTYSVLLNLANQYANNEMYPEALNSYQVIVKNKMF
SNAGRLKVNMANIYVKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRMGQYS
DAITSFEHIMSESPNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPSND
DASSNMVIEAIKNDKLHQMERDLKVLAEKFIMTSAKLIAPAIETSFATGFDWCVDMVKSS
QYVELANDLEINKAITYLRQKDFNQIEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDY
DQADRYADLAMNADRYNPAALINKGNTVFVKQDYEKAAEFYKEALRNDSSCTEALYNLGL
TYKRLNRLEEALDCFLKLHAILRNSAQVMYQLANLYELLEDPQQAIEWLMQVISVTPTDP
RALAKLGELHDGEGDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERA
TLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEV
QEYATKLKKVEKMKEIREQRVKSGREGSARGRREGREGSAGSAAGVSTPVLTSPKKASIM
DSGHSSNSTKGERLSAKMRSLPGSNEPYEASSPKEIDASYVDPLGPQMERPKTGAKRRVE
DDDFADEELGDDLLPE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttcgttacaccacctccccagagaaggagaaatggaaaacgtgcatctggct
gtggaggaggatgatatttattcgggttacaacgactataatccaacatttgactccgag
gagttggagaatgatgtgggcttccagcaagcagtgaggaccagtcatggaagaagacct
ccgatgactgccagatttcctggcactgccattggagctcggcctttagcgtcttccttt
ggatctcgtatacctatggcctcttcaatgggcagacccatgactggagctgtgcaggat
ggagcagcccgaccaatgactgctgtcagagcagcaggttacacatcctccctgacccgt
ggctcaaactttgaccctctgggccagtccagaggccccgctcctccacttgaagccaag
aatgaggacacgcctgaggagaagatcaagatcctggagaagaaagttaatgacctgata
gaagagagctgcatggcacagagcattggagccttacaactggctcttgaaaaagccaaa
gaggcagggaggaaggagagagccctggtgagacagagggaacagtctggcaatgcagaa
cacatcaatttagacctcacctactctgttttgctcaaccttgccaaccagtatgctaac
aatgaaatgtacccagaggccctaaacagctaccaggtcattgtgaagaacaagatgttc
agtaacgcaggccggctgaaggttaatatggcaaacatctatgtcaaacagaagaactac
cccaaagccatcaagttctaccgaatggcattagatcagatctccaacgctcacaaggaa
atgaggatcaagatcatgcagaatatcggcgtggtctttgtccgtatgggccaatactcc
gatgccataacgtcttttgagcacatcatgagtgagagccccaacatcaagacgggcttc
aaccttattctttgctactatgccattggtgatagggaaaggatgaagaaggcctttcag
aagctcatctctgttcctctgggaatcgatgatgaagacaagtacatcccatctaatgat
gacgctagctcaaatatggtcatcgaggccattaagaacgacaaacttcaccagatggag
agagatctaaaagtcctggctgagaagttcatcatgacctcagccaagctcatcgctccg
gccattgagacttcttttgctactggatttgactggtgtgtggacatggtgaagagttct
cagtatgttgagcttgccaacgatctagagataaacaaagccatcacctaccttaggcag
aaggacttcaaccagattgaggcggtggaaactctgaagacatttgagaagaaggacagc
agagtgaagagtgctgcagccaccaacctctctttcctctacttcctggagaaggactat
gaccaggctgaccgatatgctgaccttgccatgaacgctgatcgctacaacccggcagca
cttatcaacaaaggcaacacggtgtttgtcaagcaagactatgaaaaggctgcagagttc
tacaaagaagcactgaggaatgattcctcctgcactgaggccctctacaacctgggtcta
acctataagagactgaatcgtctagaagaggctctggactgcttcctgaagctccatgct
attctgaggaacagtgcccaagtcatgtaccagctggccaacctctatgagcttctggaa
gatccccaacaggcaatcgagtggctgatgcaggtcatcagcgtaactcccactgacccc
cgggcactggccaaactgggagagctgcatgatggcgagggcgacaagtcccaggctttc
cagtactactacgagtccttcaggtacttcccctccaacatcgatgtgattgaatggctc
ggggcttactacattgagacacagttctgtgagaaggccattcagtactttgaaagagct
acactcatacaaccaacccaggtgaagtggcaactaatggtggcaagctgctacagaaga
agtggaaactaccagaaagctctggaaacgtataaagacattcaccgcaagtttccggaa
aatgtggaatgcctgcgtttcttggtgaggctgtgcacagacatgggattgaaggaagtc
caagaatatgccaccaagctgaagaaggtggagaagatgaaggagatcagagaacagagg
gttaagtcagggcgggagggcagtgccaggggtcggagagaaggcagagagggcagcgcc
gggagtgctgcaggcgtctccacacctgtcctcacctctcccaagaaggccagcattatg
gacagtggacacagcagcaacagcactaaaggagagcggctgagtgccaagatgaggtca
cttcctggttccaatgagccctacgaggccagcagcccaaaagaaatagatgcgtcttat
gtggacccacttgggcctcagatggagagaccaaagacgggagccaagagacgcgtggag
gacgacgactttgcagatgaagagctgggagatgacctgctgccagagtag
DBGET
integrated database retrieval system
