KEGG   Micropterus salmoides (largemouth bass): 119904524
Entry
119904524         CDS       T07309                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03410  Base excision repair
msam04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119904524 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119904524 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msam03400]
    119904524 (parp4)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119904524 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 WGR-like_PARP4 VIT_2 BRCT_2 BRCT VWA VWA_2
Other DBs
NCBI-GeneID: 119904524
NCBI-ProteinID: XP_038577172
LinkDB
Position
Unknown
AA seq 1964 aa
MLDTEVTDMAVFKNCSVLFELKNLPFKEKKQLKSAVTENGGNISFVVNNQCSLIVTSDPS
NLSSSRLRGIQKYQIPVVGVDYVYSCLKKGVLLPVDEYKLDSTSPVAFSPPLPFSSQTQS
PLSHKVSKVQTNKAVAEPSKGSAGLQRAETPERSGNVLEKFRIYTETDSDLPTYPDNFEV
AKYSIFEKTNSNFCCVLELQSFKGDKGRQYRVVRCCKDNVGAKKVKDMLVFPSTSEEAVD
VYEALREKLHTTGLQLMSKIPPQALDLGSNPLQQLLLEEKLNTGSLSQEVGVFVELLWTE
ALGCLDSVLRVSIDKLSLNDVSRVEGLLLQAQRKLREANQTEMASLLDEVYTLLPHREPP
LSPTAKLISQKLDLCQLIRDVLNVSEMTLRSPVPSCLGKYRALRCSIETVPPSSSEFQAV
TSLLRGSKVQIQRVLRVSRGVELQMFKSELGNIKPLLHSSSPRNFVGVLSRGLLLPRVGV
EHHGIERTDVGNLGSGIYFSDAMSTSLKYSKPSETDGSRLLLVCDVALGRCKDVHKRDLT
LTQAPEGHHSVHGVRSTHKTHSEFEDDEYVVYSPEQVKLKYVVQFSIEGDQIKEFSPAIN
TSAEPSLPSSDQELGLEDDGVESIKNPLEGVTAGLLDSSGQQLPLQAVHVKCKLMDLLSQ
VVIFQKYTNLSSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKETARKEYKQAIE
KGHGAYLMDQDAPDVFTISVGNLPPGATVLIKVTFVSELIVRDGSILFSLPGSVAPWQEG
AALNQTTQVTVEKVCVTDEEASTREFTLDMSIEMPYEISSLKSTTHKIKMKRTDCKAVVS
VLPGEVMGPEGFQLSVTLSEVHLPRMWVEKHPDKDSQACMLVFYPDFDINSISASDEVVL
LLDTSESMKGESLRMAQRIALQVLKTLDRNLRLNVIFFGTDHTETFPTAQPLAESRQAAE
SFIKLCSSTAYQRFSPVGGSTELWRPLRALSLLPPSRGVRNLLLLSDGHIQNAELTLQLL
RDNAQHSRLFTCGLSPTANRHMLRALAQAGGGAFEFFDTKTKHNWAEKVARQVKRMASPG
CSSVSVKWQQFNPTAPPPVQAPKQLHALFNDCHTLVYGFVPHCTQATLLGNLSGQELKTM
VSTSELQKTRGTFLHKLTARALIRDYEDGSLDTNEAEHEGKKAELKRFIIELSREFSILS
QFTSFVAIEERDSEQTETGFTDIPKLIAEEDVDVLPYISWISPQDSYEEGRREELDLSDL
ITEGACFQEGEDERDISVGARAYARYSPAEDNYLDEDEDEGDVLADEAEVSHDYSPTEDN
YLDEDEDEGDVLADEAEVSHDYSPTEDNYLDEDEDEGDVLADEAEVSHDYSPTGGFFKNG
WTEGEEECFETLPMEGACFREGEDERHISVGARAFARYSPAGGFFKNGWTEGEEECFETL
PMEGACFRKGEDERHISVGARAFARYSPAEDNYLDEDEDKGGILAEEAEVSQDYSPAVSS
FTCKRRYRRSKKEVPEKLVSSTERATFQMDLKHTPSLGLCDSTYNMLLKSGASAAPQQPC
RNEESLSGSALLPSQSQPVNFSLFGSFMHFQSEPTFSASADTLPPARSIDCSSFGFSPAQ
FQSEPAFSASADTLPPPPSIGRRSFGFSLAQFQSEPAFSASADPPPPFSDHPFSSLHLPC
SAPPPKKTILVSESLEAHKSSERQDFGIACYRSISPPPERQVQVLKLASHLLNADTPSPV
DAPRKQRLQEKRLRTLELRETHVSPVVFSSGTRLALGKYPLCLKRRSLTSLHHMGRRSAV
PEALKLRWTKIFQMQHSEGYWELTTDLGDFINVDVDVFANVFLKSKGISSLGVRAHADIL
KLVATLLVLQLMRVENLEEGKLLRTLFCMDDSSQPRPEWWEEVKKAVDWVRWADRQYPCV
YSRLEFGSSWESSTRQLLGYEGLPPFSPLSGLNLQRNATPVLVH
NT seq 5895 nt   +upstreamnt  +downstreamnt
atgttagacacagaagtgacagacatggctgtgtttaagaactgttccgtgcttttcgag
ctgaagaacttgcctttcaaggagaagaagcagctcaaatcagcagtaaccgagaatgga
ggcaacatttccttcgtggtcaataaccagtgctctctgatagtgaccagtgacccgtcc
aacctcagctccagcaggctgcgtggtatccagaaataccaaatacccgtagtcggggtg
gattatgtgtacagctgtctgaagaaaggagttcttctgcccgtggatgaatacaagctg
gattctacctctcccgtcgctttttcacctcctcttcctttctcctcacagacacaaagt
ccactctcacataaagtgtccaaagtacaaaccaacaaagcagttgcagagccttccaaa
ggctcagccgggcttcagagggcagagactccggagaggagcggaaacgtcctggaaaag
ttcagaatttatactgaaactgattctgatcttccaacgtatccggataattttgaagtg
gccaagtattcaatctttgaaaagacaaacagcaacttttgctgtgtgctggagctgcag
agtttcaaaggggacaaaggacggcagtaccgtgtggtcaggtgctgtaaggataatgta
ggagccaagaaagtgaaggacatgttggtgtttccgtccacatcagaggaagctgtggat
gtgtacgaggccctcagagagaaactgcacacgactggtctgcagctgatgagcaaaatc
cctccacaagcactggacctgggctccaaccccctccagcaactgctgcttgaggagaag
ctgaacacaggaagcttatcccaggaagtgggcgtatttgtggagcttctgtggaccgag
gccctgggctgtcttgacagcgtcctcagagtttcaatcgacaagctcagcctcaatgat
gtgagcagggtggagggcttgttgcttcaggctcagaggaagctgagagaggctaatcaa
actgagatggcatctctcctggatgaggtttacaccctgctgccgcacagagagccccca
ctatcccccactgccaagctcatctctcagaaactggacctctgtcagttaatcagagat
gttctaaacgtgagtgagatgacactgagaagcccagtgccttcctgtcttgggaagtac
cgcgctctgagatgcagcattgagactgttccccccagcagctcggagtttcaggctgtg
acgtctctgctgcggggcagcaaggtacagatccaacgggtgctgcgtgtcagcagaggg
gtggagcttcagatgtttaagagtgagctcgggaacattaagcccctcctccattcctcc
agccccagaaactttgtgggagtcctgtctcgtggtctgctgctgccccgtgttggagtg
gagcatcatgggatagagagaacagatgttggtaatctgggcagtggaatctactttagt
gatgccatgagcaccagtttgaagtactctaagcccagtgagacagacggctctcggctg
cttttggtttgtgatgtggcattgggacgctgcaaggatgtccacaagagagacctcaca
ctgacccaggctcctgagggacaccacagtgtgcatggtgtccgcagcacccataaaact
cactctgagtttgaggatgacgaatacgtggtgtacagtcctgaacaggtgaaactgaag
tacgtggttcagtttagcatagagggagaccaaataaaggagttcagtcctgccatcaat
acctcagctgagcctagcctgccctcttctgaccaagagctcggtttggaggatgacggg
gttgaaagcattaaaaacccactggagggtgtgacagctggacttttggacagctctggt
cagcagctccctctgcaggccgtccacgtgaagtgcaaactgatggatctgctctctcag
gtcgtcattttccaaaagtacaccaatctgagctctgtgccaattgaggccaagtatgtc
ttcccattggatgattctgcagcagtgtgtggatttgaagctttcatcaatgggaaacat
gtggtgggacaggtaaaggagaaagagacggcccgcaaggagtacaagcaggctattgag
aaaggccatggagcctacctcatggaccaggacgcccctgatgtgttcaccatcagtgtg
ggcaatctgcccccgggtgcgactgtcctcattaaagtcacctttgtgtctgagctgatc
gtcagggacgggagcatcctcttctccctccctgggagtgtggctccgtggcaggagggt
gcagcgctcaaccagaccacacaagtcactgtggagaaggtgtgtgtgaccgatgaggaa
gcaagtacgagagagttcaccctggacatgtcaatcgagatgccctatgagatctccagc
ctaaagagcaccactcacaaaatcaagatgaagagaacagactgtaaggcggtggtgagc
gtgctgccgggagaggtcatgggtccagaaggtttccagctgtcagtcactctgtctgag
gtgcacctgcctaggatgtgggttgagaaacaccctgacaaggacagccaggcctgcatg
ttggttttctatccagactttgacatcaactccatttcagcatccgatgaagtcgtcctg
ttgctggacacatctgagtccatgaagggagaatctctccgcatggcccagagaattgcc
ctgcaggtcctcaaaacccttgaccgaaacctcagactcaatgtcattttctttggcaca
gatcacacagaaactttcccgacagcacaacctcttgctgaatctcgtcaggcagccgag
agcttcatcaagctctgctcctctaccgcctatcagcgcttctctccagtaggaggcagc
actgagctgtggcggcccctgcgagcgctcagcctgctgcctccgtcccgaggcgtcagg
aacctgctgctgctgtcggacggccacatccagaacgcagagctcaccttgcagctgctc
agagacaacgctcagcacagccgcctcttcacatgcggcctcagcccgacagccaatcgg
cacatgctgagagccctggcccaggcagggggtggagccttcgaattcttcgacacaaaa
accaaacacaactgggcagagaaggtggctcgtcaggtgaagcgtatggcttctcctggt
tgcagttcagtttcagtgaagtggcaacaatttaatccaacagcgccccctcccgtgcaa
gctcccaagcagctccatgctctgttcaatgactgtcataccctggtttatggctttgtg
ccgcactgcactcaggccacccttcttggtaacctgagtggtcaggagctcaaaaccatg
gtgtcaaccagtgagctgcagaaaaccaggggcacatttctgcacaagctcacagcaagg
gccctcatcagggattatgaagacggaagcctggacaccaatgaagctgaacatgagggg
aagaaagcagagttgaagcgcttcatcatcgagttaagcagagagttctccatcctgtct
cagttcaccagctttgtggccatcgaggaaagggactcagaacaaacagagacgggtttc
acagacatccccaagctgatcgcagaggaagatgtggatgtcctcccctacatcagctgg
atttctcctcaggatagttatgaggaaggaaggagggaagagttggatttgagtgatttg
ataacggaaggtgcatgttttcaggagggtgaagatgagagagacatttctgtaggagcc
agagcctatgcaagatattcacccgcggaagataattatcttgatgaggatgaagatgag
ggagatgttttggcagatgaggccgaagtctctcatgattattcacccacggaagataat
tatcttgatgaggatgaagatgagggagatgttttggcagatgaggccgaagtctctcat
gattattcacccacggaagataattatcttgatgaggatgaagatgagggagatgttttg
gcagatgaggccgaagtctctcatgattattcacccacgggtggattcttcaagaacgga
tggacagaaggggaggaagagtgttttgaaactttgccgatggaaggtgcatgttttcgg
gagggtgaagatgagagacacatttctgtaggagccagagcctttgcaagatattcaccc
gcgggtggattcttcaagaacggatggacagaaggggaggaagagtgttttgaaactttg
ccgatggaaggtgcatgttttcggaagggtgaagatgagagacacatttctgtaggagcc
agagcctttgcaagatattcacccgcggaagataattatcttgatgaggatgaagataag
ggaggtattttggcagaagaggccgaagtctctcaagattattcacccgcagttagttcc
ttcacctgcaagagacggtaccgaaggtccaaaaaagaggtgcctgaaaagttggtttct
tcaactgagcgagcaacatttcaaatggacctcaagcatactccttctcttggcttgtgt
gactccacatacaacatgctcctcaaatctggtgcctctgcagcccctcaacaaccctgt
cgcaatgaagaaagcttgagtggctcagcacttttgccatcccaatcgcaacctgtcaat
tttagcttatttggctcttttatgcacttccagtcagaacctacattttctgcctctgca
gacactctacctccagcccgttcaattgattgtagctcatttggcttttcacctgcgcag
ttccagtcagaacctgcattttctgcctctgcagacactctacctccacccccttcaatt
ggtcgtagatcatttggcttttcacttgcgcagttccagtcagaacctgcattttctgcc
tctgcagaccctccaccacctttcagtgatcatccgttctcatcacttcaccttccttgc
tcagctcctcctccaaaaaaaacaattctagtcagtgagtcactggaggcacacaagagc
tcagaacgacaagattttgggattgcatgttataggagtatatcaccaccccccgaacgt
caagtccaagttttgaaactggccagtcatctattaaatgctgacactccaagtccagtt
gatgcaccgagaaaacagaggttgcaagaaaaaaggttgcgaacacttgaattacgagaa
actcatgtaagtccagtagtgttttcttctgggacaagactggccctgggaaaatatccc
ctttgtttaaaacgaaggtccttgacatctttacatcacatggggagaaggtcagcggtt
cctgaagcactgaagctcagatggacaaagatcttccagatgcagcattcagagggctac
tgggagttaaccacagacctgggtgatttcataaatgtcgatgtagatgtcttcgccaac
gtgttcctgaaaagcaagggcatcagttctctaggtgtgagggcccatgcagacatcctg
aagctggtggcgactcttctggttctgcagctgatgagggtggagaatctggaagaaggc
aaactgcttcgcaccctcttctgcatggatgactcctctcagcccaggcctgagtggtgg
gaggaagtgaagaaggcggtggactgggttcgctgggctgaccggcagtacccctgtgtc
tacagccggctggagtttggttcgagctgggagtcctccacccgtcagctgctgggctac
gaaggcctccctcccttctcacctctcagtggtctcaacctgcagaggaacgctacccct
gtactggtgcactga

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