Micropterus salmoides (largemouth bass): 119904561
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Entry
119904561 CDS
T07309
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119904561 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119904561 (hspd1)
03110 Chaperones and folding catalysts [BR:
msam03110
]
119904561 (hspd1)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119904561 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119904561 (hspd1)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
119904561 (hspd1)
Messenger RNA biogenesis [BR:
msam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
119904561 (hspd1)
Chaperones and folding catalysts [BR:
msam03110
]
Heat shock proteins
HSP60 / Chaperonin
119904561 (hspd1)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
119904561 (hspd1)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119904561 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
119904561 (hspd1)
Exosomal proteins of breast cancer cells
119904561 (hspd1)
Exosomal proteins of colorectal cancer cells
119904561 (hspd1)
Exosomal proteins of bladder cancer cells
119904561 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
119904561
NCBI-ProteinID:
XP_038577276
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIELKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVINELKRLSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTSKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGDDAVGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGSPAEVEKRAAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPVLDTIEAINADQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGSAELGYDAMRGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEMPKEEKEMPGGGMGGMGGMGGMGGGMGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttaccaacagtcatgaagcaggtgaggcctgtgtgcagggcgctggctcct
caccttacgcgagcctatgccaaggatgtgaagttcggagctgatgctcgtgccctcatg
ctgcagggggtggacctgctggctgatgctgtggctgtcaccatgggcccaaagggtcgt
actgtcatcattgagcagagctggggaagccctaaggtcaccaaggatggtgtgactgtg
gccaagagcatcgagctgaaggacaagtacaagaacatcggcgccaagttggtgcaggat
gtggccaacaacacaaacgaggaggccggggacggcactaccaccgccacagtgttggcc
cgtgctattgccaaggagggcttcgacaccatcagtaaaggcgccaaccctgtggagatc
cgccgtggagtcatgatggctgtagaaaccgtcatcaatgagctgaaaaggctctccaaa
ccggtcacaacccctgaggagatcgcacaggttgctacaatctcagccaatggagacgtg
gagatcggtaccatcatatccaatgccatgaagaaagttggccgcaagggagtcattact
gtcaaggatgggaagactctgcacgatgagctggagatcattgagggtttgaagttcgac
cgcggctacatctccccttacttcatcaacacttccaaaggccagaagtgtgagttccag
gacgcctacctgctgctcagtgagaagaagatctccagtgtccagagcatcgtgccagcg
ttggagattgccaaccagcaccgcaaaccgctggtgattatagctgaggatgtggatgga
gaggccctcagcaccttggttctcaacaggctcaaggttgggcttcaggtggtagctgtt
aaagcccccggctttggagacaacaggaagaatcagctgagggatatggcagtcgccacc
ggaggcactgtgtttggagatgacgctgtgggcctagcgctcgaggacatccaggctcac
gactttggaaaggttggcgaggtgcagattaccaaagacgacaccttgctgctgaaggga
ggcggcagcccggctgaagtggagaagcgggcagcagagatcgtggagcagctggagaac
accaccagtgactacgagaaggagaaactcaatgagaggctggccaagctgtctgatgga
gtggctgtactcaagatcgggggaacaagtgatgtggaagtgaatgagaaaaaggaccgt
gtgacagatgctctgaacgccacacgggcagctgtggaagagggtatcgtaccaggtgga
ggctgcgctctcctgcgctgcatcccagtgcttgataccatcgaagccatcaatgctgac
cagaagatcggcgtggacatcatcaggcgggcgctccgtattccagccatgaccatcgcc
aagaacgcaggtgtggagggatcgctggtggtggagaagatcctgcagggatcggctgag
ctcggttatgatgccatgcgaggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggccctgttggatgccgcaggagtagcatctctgctgtcc
actgctgaggccgtagtcacagagatgcccaaggaggagaaggagatgccaggaggcggc
atgggcggaatgggaggcatgggcggtatgggcggcggcatgggtttctaa
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