KEGG   Micropterus salmoides (largemouth bass): 119904573
Entry
119904573         CDS       T07309                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04137  Mitophagy - animal
msam04144  Endocytosis
msam04145  Phagosome
msam04148  Efferocytosis
msam05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119904573 (rab5b)
   04145 Phagosome
    119904573 (rab5b)
   04137 Mitophagy - animal
    119904573 (rab5b)
   04148 Efferocytosis
    119904573 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119904573 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119904573 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119904573 (rab5b)
   04031 GTP-binding proteins [BR:msam04031]
    119904573 (rab5b)
Membrane trafficking [BR:msam04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    119904573 (rab5b)
 Endosome - Lysosome transport
    119904573 (rab5b)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119904573 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   119904573 (rab5b)
  Exosomal proteins of colorectal cancer cells
   119904573 (rab5b)
  Exosomal proteins of melanoma cells
   119904573 (rab5b)
GTP-binding proteins [BR:msam04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    119904573 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SDR-like AAA_16
Other DBs
NCBI-GeneID: 119904573
NCBI-ProteinID: XP_038577294
LinkDB
Position
Unknown
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNDLFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgctccaacggcacactaccacaaaccaagatctgc
cagttcaagttggtgctcctgggtgacatggctgtgggcaagtccagcctggtgctgcgt
tttgtcaaggggcaattcgacgagttccaggagacaaccataggagctgcatttctggct
cagtccgtgtgcctagatgataccactgtgaagtttgagatctgggacaccgcaggacaa
gagcgataccatagcctggctcctatgtactaccgtggcgctcaggctgctatcgttgtc
tttgacatcaccaagccggagactttcgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgttatcgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaagcccagacatactctgaagacactggcttgctcttt
atggagacttctgccaagacagcaatgaacgtcaatgatctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcacgacatcgtggagtcaac
ctccaggacccagatgcccactctaccagagcctgctgtggtgggaactag

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