Micropterus salmoides (largemouth bass): 119904573
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Entry
119904573 CDS
T07309
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04144
Endocytosis
msam04145
Phagosome
msam04148
Efferocytosis
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119904573 (rab5b)
04145 Phagosome
119904573 (rab5b)
04137 Mitophagy - animal
119904573 (rab5b)
04148 Efferocytosis
119904573 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119904573 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119904573 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119904573 (rab5b)
04031 GTP-binding proteins [BR:
msam04031
]
119904573 (rab5b)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
119904573 (rab5b)
Endosome - Lysosome transport
119904573 (rab5b)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119904573 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
119904573 (rab5b)
Exosomal proteins of colorectal cancer cells
119904573 (rab5b)
Exosomal proteins of melanoma cells
119904573 (rab5b)
GTP-binding proteins [BR:
msam04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
119904573 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
119904573
NCBI-ProteinID:
XP_038577294
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNDLFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccacaaaccaagatctgc
cagttcaagttggtgctcctgggtgacatggctgtgggcaagtccagcctggtgctgcgt
tttgtcaaggggcaattcgacgagttccaggagacaaccataggagctgcatttctggct
cagtccgtgtgcctagatgataccactgtgaagtttgagatctgggacaccgcaggacaa
gagcgataccatagcctggctcctatgtactaccgtggcgctcaggctgctatcgttgtc
tttgacatcaccaagccggagactttcgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgttatcgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaagcccagacatactctgaagacactggcttgctcttt
atggagacttctgccaagacagcaatgaacgtcaatgatctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcacgacatcgtggagtcaac
ctccaggacccagatgcccactctaccagagcctgctgtggtgggaactag
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