Micropterus salmoides (largemouth bass): 119904589
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Entry
119904589 CDS
T07309
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119904589 (pcdh8)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Protocadherins
119904589 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119904589
NCBI-ProteinID:
XP_038577314
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MGFCKTARIGLCMVLALFVYTIQCTTTRYLTYEEDAPGTEIGNLSQDLKIDPADDPDTSF
RFMQENNSSVIQMRESDGLLSVAEIIDREQLCPRSPRCFITFDTVAFSREKFQLIHVEIE
VKDINDHSPHFPRNETVIEIVENVPLDSRFPLQIALDQDVGENYIQSYNISPSSHFAIEV
RDREDGVKFAELVLVRALDREVEDSYTIEVTATDGGVLAKSGSMIVNIKVLDFNDNTPTF
EHSSLKVELNEDSPVGHRVLKVHAFDPDDGINGEVTYSFADGLSPEAGRIFHIDPFSGDV
TLKALVDFEKRRSYELNIKASDSGANSVPSSCKVVIDIVDVNDNAPEISIKPMTSSSDGV
AYITEAAAAESFVALIRTSDRDSGSNGYVRISLLGHEHFTLQQAYGDSFMIITSTTLDRE
KIPEYNLTVVAEDLGSPPFKTVRQYTIRVTDENDNAPLFSKSLYEVSVLENNIPGSYVTT
VVARDPDVGKNAKVSYKLIDSEVPGGSPVSTYVSVDSLSGSLYTLRSFDHEILQQIELVI
QAEDRGSPSLSSTSTIRIKVVDQNDNYPYFTYPVLLNDSADIPLPFNAPTGYLALRVSAE
DEDEGVNGKLCYQIVQGDPKHFTMNKDTGEIALKQWLTAEIGEVLEVKIAVSDNGRSPLS
SSATIRFVISDTEPSEDQVVIVLRSSDGEGTNLDGSLIVIIMLSGGCALLLIAIVVVVVT
CKHSCGGRNHGPKREVCHSLFDSRHMPMLGSTEPNIYTGQQGFFHERTSSSLDDSCLYEE
RSGDSETKMFLPSKHFQATSVWQGDKYCLQVSGIGNTDQLSVKDSGKGDSDFNDSDSDIS
GDGGKKNFSTFQPRLKSSSSAANSLSGDCQGTYCAIPPQNFRALRDNAYTIGFSPAPVFN
NPHGYHHSWKDSGYGTNRPKSRNSMQTFSRTGTLPSYFPQQQREADVGAAEIHKQSPNIV
TVATALEVATIF
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgcaagactgcacgcattggactgtgcatggtgcttgctttatttgtatac
actatccagtgtacaaccacacggtatttaacctacgaagaggatgcgcccgggacggag
ataggaaatttgtcccaagatttaaagattgatccagctgatgaccctgacacatctttc
cgcttcatgcaagaaaacaattcttctgtgattcaaatgagggagagtgacggacttttg
agtgttgcagaaataattgatcgagagcagctctgccccaggtctccgcgttgcttcatc
accttcgacactgtggccttctccagagaaaagtttcaacttatccatgtggagatcgag
gtaaaagacatcaacgaccactctccccactttccgcgcaacgagaccgtcattgagata
gtggagaatgttcccctggactcgagattcccactgcagattgctctcgaccaggacgtg
ggtgaaaactacattcagagctacaacatttctccctctagtcattttgccattgaagtg
cgcgatcgggaggatggagtgaagtttgctgaactggttctggtgagggcgctcgacagg
gaggtggaggactcctacacaatcgaagtcactgcaactgacggaggagtgcttgcaaag
tccggatcaatgattgtaaatatcaaagtgctggattttaatgacaacaccccgacgttt
gaacacagctcactaaaggttgagctgaatgaagactccccggtaggtcaccgagttctc
aaagtgcacgcttttgaccccgacgacggtattaacggcgaggtgacgtactcgtttgct
gacgggttatcaccagaagctgggcgcattttccacatcgaccctttttcaggggacgtg
accttgaaagcgctggttgatttcgagaaaaggaggtcatacgagctgaacatcaaagct
tctgattctggcgcgaactctgtcccatccagctgcaaagttgtgatagacattgtggac
gtgaatgacaatgcacctgaaatcagcattaaaccgatgacctccagcagcgacggagtc
gcttacattacagaagctgcagctgcggagagtttcgtggctctgatccgcacctcggac
agagactctggctccaacgggtacgtgcgcatcagcctgctcgggcacgagcatttcacc
ctccagcaggcatatggggactctttcatgattattaccagcactacattagacagagag
aagatcccagagtataacctgactgtggttgcagaagacctgggaagcccaccattcaaa
actgtcagacagtataccatccgtgtaacagatgagaatgacaacgcccctcttttcagt
aagtcactttatgaagtttcagtcctggaaaataatattccaggttcgtatgttaccact
gttgttgcccgtgatccagatgtgggaaagaatgccaaagtgtcttacaaactcatagat
tcagaggtgccaggaggatctccagtgtccacttatgtgtctgtggattcactctcaggg
tctttgtatactttgaggtcttttgatcacgagattcttcagcagattgagttggtcatc
caagctgaagacagaggttccccctcactttcaagcacatcaacaatcagaattaaagtt
gtggatcagaatgacaactatccatacttcacctaccctgtacttctgaatgactctgct
gatattcctctcccttttaatgcacccactggctatcttgcccttcgcgtctcagctgaa
gatgaggacgagggagtgaatggcaagctctgctaccaaattgtacaaggtgacccaaag
catttcacaatgaacaaagacacaggagagattgctttaaaacaatggctgacagctgaa
attggagaagtgctggaagtgaaaatcgccgtgagtgacaatggcaggtccccgctctct
agcagtgccactattaggtttgtcatctcagacacagagccctctgaagaccaagttgtc
attgtgttgcggtcaagtgatggagaaggcaccaacttggatggctcactaattgtcatt
attatgctcagtgggggttgtgcactattgctgattgcaatagtggttgttgttgtcaca
tgcaaacacagctgtgggggcagaaaccacggccccaagagagaagtatgtcacagcctg
tttgacagcaggcacatgcccatgctcggctcaacagaaccgaacatatacaccggccag
caaggcttcttccatgagagaacctcttcgtctctggatgattcctgcctgtacgaggag
aggagtggggactcagagacaaagatgttcctgccctccaagcatttccaagcaacatct
gtgtggcaaggtgacaaatactgcttgcaagtgagtggcattggcaacactgaccagctg
agcgtgaaggacagtggcaaaggggacagtgactttaacgacagtgactctgatatcagt
ggtgacggaggcaagaagaacttcagtaccttccagccaaggctaaaaagttcatccagt
gctgctaacagcttgtctggagattgccaaggcacctactgtgcaattccaccacagaac
ttcagagccctcagagacaatgcatacacaataggcttctccccagcaccagtcttcaac
aatcctcatggctatcaccactcttggaaggactctggttatggcacaaatcggccaaaa
tcaaggaacagcatgcagaccttctccaggaccgggaccctcccatcttacttccctcag
caacaacgtgaggctgatgttggagctgctgaaatccacaagcagagtccaaatattgta
actgtggctactgcactagaggtcgcaactatcttttaa
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