Micropterus salmoides (largemouth bass): 119904607
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Entry
119904607 CDS
T07309
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119904607 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119904607 (ddx3xa)
03041 Spliceosome [BR:
msam03041
]
119904607 (ddx3xa)
03036 Chromosome and associated proteins [BR:
msam03036
]
119904607 (ddx3xa)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119904607 (ddx3xa)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119904607 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
119904607 (ddx3xa)
Spliceosome [BR:
msam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119904607 (ddx3xa)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119904607 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
119904607
NCBI-ProteinID:
XP_038577338
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSHVVVDNPHGLEQQLAVLDLNSADGQGGGTGRRYIPPHLRNKDAPPKNAGNAYSAGRQC
GYSVAPVTLYSPGWDGGRSNGFVNGYHDNRTNGGFGGRGPPRNDRGGRGAYRGNRGGGSF
NQPLQNAGMGSFDNKDGNWGGTQRDAAYNSFGGRSDRSKTGFFNDRGAGSRGRYERGGFA
GGGNSRWQEDSREEDWSKPTAPNERLEHELFSGGNTGINFEKYDDIPVEATGSNCPPHIE
SFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKSKRDLMACAQTGSGKTAAFLLPVLS
QIFTEGPGDALQASKNNGQDNGRYGRRKQYPMSLVLAPTRELALQIYEEARKVAYRSRVR
PCVVYGGADIGQQIRELERGCHLLVATPGRLVDMMERGKIGLDYCNYLILDEADRMLDMG
FEPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENIT
QKVVWVEDNDKRSFLLDLLNATVIPSEVQENVTEAPEKPGKESLTLVFVETKKGADALED
FLYHEGYACTSIHGDRSQRDREEALNHFRSGRCPILVATAVAARGLDISNVKHVINFDLP
SDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQ
HKSSTRGRSKRFSGGFGARDYRQTPGGAGSFSNSRGGRSTGGHGGSRGFGGGGFGGNFYS
NDGYGGNYSHSGSVDWWGN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgataatccacacggtctagagcagcagcttgctgtcctagac
ttgaactctgctgacgggcaaggcggaggaactggcaggcgttacattccacctcacttg
agaaacaaagatgctcctcctaaaaatgcaggaaatgcttattccgctggtagacagtgc
ggttattcagtggcaccagtaaccctctactcacctggatgggacggcggacgcagcaat
ggattcgtgaatggttaccatgacaaccgcacaaatggtggctttggagggcgaggaccc
cctcgcaatgatagaggtgggcgtggcgcctaccgtggtaacaggggtggaggctcgttt
aatcaaccattacaaaatgcaggcatgggcagttttgacaacaaagatggcaactgggga
ggaactcaaagggatgctgcctataacagctttgggggccgttctgataggtccaagact
ggcttcttcaatgaccgtggggcaggttcaagaggaagatatgaacgtggaggctttgct
ggtggaggaaacagccgctggcaggaggactccagagaagaagactggtccaagcccact
gctcccaatgagcgcctggaacatgagttgttctccggaggcaacactgggataaacttt
gagaaatatgacgatattcccgtggaggccactggcagcaactgcccacctcacatcgaa
agcttccatgatgtggacatgggggagatcatcatggggaacattaccttgagtcgctac
actcgtcccactccagtccagaagtatgctatccccatcatcaagtccaagagagacctg
atggcttgtgcccagactggctctggtaagactgctgctttcttgctgccagtgctgagt
cagatctttacagaaggtccaggagatgctctgcaggcctccaaaaacaacggacaggac
aatggaaggtatggtcgccgtaagcagtatccaatgtccctggtgctggcacccaccaga
gaactggctttacagatctatgaagaagcaaggaaggttgcctatcgctcccgtgtgcgt
ccctgcgtggtgtacggcggtgctgatattggtcagcagatcagggagttggagagaggc
tgtcacctgctggtggccacaccaggacgtctggttgatatgatggaaaggggcaagatt
ggcctggactactgcaactacttgatcctggatgaggctgaccgcatgttggacatgggt
tttgagccacagatcagacgcattgtggagcaagatacaatgccgcctaaaggtgtccgt
cagaccatgatgttcagtgccactttccccaaggaaattcagatcctggctcgtgacttc
ctggaggactacattttcttggcagtgggacgtgttggttccacttcagagaacatcacc
cagaaggtggtctgggtagaggacaacgacaagaggtccttcctcctcgacctgcttaac
gccacagttattcccagtgaggttcaggaaaatgtgacagaggccccagagaaacctggc
aaagaatcgttgactctggtgtttgtggaaacaaagaagggagccgacgctctagaggac
ttcctttaccacgagggttatgcctgcaccagcatccacggagatcgatcccagagagac
agagaagaagctctgaaccacttccggtctggacgctgccccatcttagtggctacagct
gtggctgctagaggtctggacatcagcaatgtgaagcacgtcattaactttgatttgccc
agtgacattgaggaatacgttcaccgtattggccgtacgggacgtgtgggcaacctcggt
ctggccacgtcgttctttaacgacaaaaacagcaacataaccaaagatttgctggacatt
ttggtggaggccaagcaggaggttccctcctggcttgaaagcctggcctacgagcaccag
cacaagagcagcacccgggggcgctctaagaggttctctggtggtttcggagctagagac
taccgtcagacgccaggtggcgccgggagcttcagtaacagccgtggagggcgcagcaca
ggaggccatggaggaagtcgtggctttggtggaggtggctttggtggcaacttctacagc
aatgacggctatggaggaaattacagccactctggaagtgtggattggtggggcaactag
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integrated database retrieval system
