Micropterus salmoides (largemouth bass): 119904908
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Entry
119904908 CDS
T07309
Name
(RefSeq) biglycan-like
KO
K08118
biglycan
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119904908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119904908
Proteoglycans [BR:
msam00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
119904908
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_LRWD1
LRR_5
Motif
Other DBs
NCBI-GeneID:
119904908
NCBI-ProteinID:
XP_038577459
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MHQSQIRTSGPVMHPILVLFLVVHVTPSPVPSIVLPFQQKGLPDLGKTVDVESLIMLMND
EEEGSTFEDIFQVEHPSCPFGCQCNLNVVQCSDLGLHYVPFNIPPDTRLLDLQGNQITEI
RENDFKGLRNLYALVLVNNLISKVHPRAFLPLGRMQKLYLSHNLLTTVPKNLPPSLQELR
IHDNRIRKVASGTFSGLLSMNCIEMGRNPLRNSGLEPGAFDGLKLKFLRISEAKLTGIPK
DLPYNLNELHLDQNQIQAIELEDLRRYAQLYRLGLGNNQIRHIEHGSLYYVQNLHELHLD
NNLLSHVPAGLPEMKHLQVVYLHSNNISSVDVNDFCPKSLSMKKTAYNGISLFSNPIQYW
EVQPSTFRCVSSSLAIQFGNYN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagagccagatccggacaagtggtccagtcatgcatcccatcttggttctgttt
ctcgtggtgcatgtaacaccgtcacctgtcccctccatcgtcttgcccttccagcagaaa
ggcctcccagatctggggaagactgttgatgttgagagcttgatcatgctaatgaatgat
gaagaagagggctcaaccttcgaagacattttccaagtcgaacacccgtcatgtccattt
ggatgtcagtgcaacctcaacgtagtgcagtgctctgacttgggtttacattacgtgccc
ttcaacattcctcctgataccagactgctggacctccagggcaaccagatcacagagatc
agagagaacgactttaagggactcagaaacctctatgctctggtgttggtgaacaatctg
atctccaaggtccacccacgtgccttcctgcctcttgggcgcatgcagaagctctatttg
tcccacaacctcctgaccactgttcccaagaacctgcccccctctctgcaagagctgcgt
atccacgacaatcgcattaggaaagtagcatcagggacattctctggtctactcagcatg
aactgtattgagatgggtcgtaatcccctcaggaacagtggtttggagcccggtgcattt
gatggacttaaactgaaattcctgcggatttcagaggctaagctcacgggtattccaaaa
gatctgccttataatctaaatgagttgcatctggatcaaaatcaaattcaggctatcgag
ttagaagacctgaggcggtatgcacaattgtacaggctgggccttgggaacaaccagatc
cgccatattgagcatggcagcctgtattatgtgcagaatctccatgaacttcatttggat
aataacctgctgtcccatgtgcctgctggtctgccagagatgaaacacctgcaggtagtc
tacctgcactccaacaacatcagcagcgtggacgtgaatgacttctgccctaagtccctc
agcatgaagaagacggcatataacggcatcagtcttttcagtaatcccatccagtactgg
gaggtgcagccttcaacgtttcgctgtgttagcagcagcttggccatacagtttgggaat
tataattag
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