Micropterus salmoides (largemouth bass): 119905225
Help
Entry
119905225 CDS
T07309
Symbol
apex2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119905225 (apex2)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119905225 (apex2)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119905225 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
119905225
NCBI-ProteinID:
XP_038577939
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MKLVTWNINGIRTFRGGIKKALDSLGADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPYAAEEGLTGLLTNHEGAVGSYGDQSEFCSEELQLLDNEGRAV
ITKHRIMCQDQEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEAILKDGSHVIVL
GDVNTSHRPLDHCDPSDIDDFDENPGRKWLNAFLHCGKQEAERNEEEPDEESQETSTDPI
HGGTFMDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLATEQFVAADIMPE
VEGSDHCPVWGQLSCSLLPSSKPPPLCTRYLPEFAGKQQKLSRFLVKVEQKSIQSEQRDA
LPGSQEEGERRENLNSFGAGNICGKKRVLTSDSVVAKGKKNKTINTSSKPQGSLLSFFKP
KLTNVIPSTVALARQCESGALESRPQLCTSSTTETLIKTKHLTPQPREPNKGASLVFWKS
VLHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCARPQGHASNPEARCNFFAWVENR
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttacctggaacataaatggcataaggactttcagaggcggcattaaaaag
gctcttgattcactgggcgcagatattatctgtgttcaagagacaaaagtgacaagagac
ttgcttgatgaaaggactgcaattgttgacggctacaactcctatttcagcttcagtcga
ggacgcagcggctattcaggagttgccacttattgtaaggacagtgccactccatatgct
gctgaggagggtctcacgggtctgctgaccaaccatgaaggggctgttggatcctatggt
gaccagtctgagttctgtagcgaggagctacagcttttggacaatgaaggacgagccgtt
attacaaagcacagaatcatgtgtcaggaccaagagcaaactgttactgtaatcaatgta
tactgtccacgggctgaccctgaaaagccggagcgaaagcagttcaaactgcagttctac
aagctgcttcagtgtcgtgcagaagctatactgaaagatgggagccatgtgattgtttta
ggagacgtaaatacatctcacaggccactagaccactgtgaccccagtgatatcgatgat
tttgatgaaaaccctgggaggaaatggctgaatgcctttttgcactgtggcaaacaggaa
gctgaaaggaatgaggaggaacctgatgaagaatctcaggaaacgtctacagatcccata
cacggtggaacatttatggatacctttcgctatttccatccaactcgcaccaacgccttc
acatgctggtccactctcactggagcgcggcagaccaactatggcacacgcattgactac
atatttgctgattgccagcttgcgacagagcagtttgtggcagcagacatcatgccagag
gtggaggggtcagaccactgccctgtgtgggggcagctgagctgctctctcctgcccagc
tccaagcctcctcccctctgtactcgctacctcccagagtttgctggcaagcagcagaag
ctgtcccgcttccttgttaaggtggaacaaaaatcaattcagtctgagcagagggatgca
ttacctggatctcaagaagagggggaaaggagggagaatttaaactcattcggagctgga
aacatttgtggtaaaaagcgtgtattaacatcagactctgttgtcgcaaaggggaaaaaa
aacaagaccataaatacttcttccaagccacagggcagtctcctttcgtttttcaaaccc
aaactaacaaatgtcattccctctactgtagcccttgccaggcagtgtgaaagtggtgct
ttggaaagtcgaccacagctgtgcaccagcagcacaacagaaacactgattaagacaaaa
catttaaccccacagcccagggaacccaataaaggtgcatcgctagtgttttggaagtca
gtgcttcatggacctccccccccaccctcctgtaaagtccacggggaaccctgtgtgctc
cgtactgtgaagaaggaggggccaaacatgggcaagcagttttttgtttgtgcccgtcca
cagggacatgcctccaaccccgaggctcggtgtaatttttttgcatgggttgagaatcgg
aagtga
DBGET
integrated database retrieval system
