Micropterus salmoides (largemouth bass): 119905469
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Entry
119905469 CDS
T07309
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119905469 (calcoco1a)
04131 Membrane trafficking [BR:
msam04131
]
119905469 (calcoco1a)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
119905469 (calcoco1a)
Membrane trafficking [BR:
msam04131
]
Autophagy
ER-phagy
ER-phagy recepters
119905469 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CALCOCO1
SKICH
WD40_alt
Motif
Other DBs
NCBI-GeneID:
119905469
NCBI-ProteinID:
XP_038578467
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MEKPWRVEFRNVGCSYFPQSRVDCHYTLSSQHNWASNDWIGLFKVGWSSVKDYHTFVWAL
APADYQEGTDVNCCVHFQASYLPKPTSQEYEFVYIDAKGEVASRSSKFTFCAPKPLEDLV
TLEEEPHGEEGSTDMLLVVPRAELLQSRLQECLRERAELLQVQEAANRQRGEEKEAYKRA
REAWDRRRKDLESDIARLQEELRQSREKIEEMERMQKEEQALGESLAKEKSTLLDAKEAS
KVRIKELEEDMKTLTQRTVERETELERMKERAKRAGAQRKEEESERKSLQTKLEQTEGEL
RSLSKEFQGLRNSLAQRDTSVLQLQSTITTLTQKLTTAHRKEAESEATLKEKRILWERLN
ASERAAEGLKSDLSAMVAQRDHGQAELHQARLQAAQLTLQLADSSLALREGRARWAQERQ
NLQHTAEKDHERLEKLSAEMQRIEERLQEERMERVKLEVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLLAEKQELMEYICQLEQKMGTVASAKWSVAPIASTGRPGSALSDS
EDENPVALQPLRPPRPLGHYSLCEQGEPDSMLLATPPPSPREAERSAVVINQPAPLSSPH
QAGSDTLAHSSDSEEESDPLQCGRHSSGEETALLLSEHTDTVLSDLADTSLW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccctggcgagtggagttcagaaacgtgggctgcagttactttcctcagagc
agagtcgattgccactacacactgagctcacagcacaactgggccagtaatgactggata
gggctctttaaggtgggatggtcatcagtgaaggattaccacacgtttgtttgggcactg
gccccagctgactatcaagagggcacggatgtcaactgctgtgtgcacttccaggcctcc
tacctacccaagcccacctcccaagagtatgaatttgtatatatcgatgctaagggggaa
gtggcctcccgcagctcgaaattcactttctgcgcaccgaagccacttgaggatctggtg
acccttgaggaggagccccatggagaggaaggaagcacagacatgttgctggtagtgccc
agggctgaactgctgcagagtcgactgcaggaatgtctgcgagagcgcgctgaactgttg
caggtgcaggaggcggcaaacaggcagaggggggaagagaaggaggcatacaagagggca
agggaggcctgggacagacgacgcaaagatctagaaagtgatatcgccaggctgcaggaa
gagctgaggcagagtcgagagaaaatcgaggagatggagaggatgcagaaggaggagcag
gctttgggagaatcactagccaaggagaaaagtactttattagatgcgaaggaggcgagc
aaagtgcgaatcaaagagctggaggaggatatgaaaaccctgacacagagaactgtggaa
agagagacagagttggaaaggatgaaggaaagagcaaagagggcaggtgctcagagaaaa
gaagaggagagtgagagaaagagcctgcagaccaagctggaacagacagagggtgaactc
cgaagtctttctaaggagttccagggcctgaggaattcgctggcccagagagacacaagt
gtcctgcagctccaaagcaccatcaccacccttacccagaaactcaccactgcccacagg
aaagaggcggagagcgaggcaacactgaaggagaagcggattctttgggagcgtctgaac
gcgagcgagcgtgctgcagagggcttgaagagtgatctaagtgccatggtagcccagagg
gatcacgggcaggccgaattgcatcaggctcgcttgcaagctgcccaactcacccttcag
cttgcagattccagtctggccctaagagagggaagagcccgttgggcccaggagaggcag
aatctgcaacacactgctgagaaggatcatgagcgtctggagaaactcagtgcagagatg
cagaggatagaggagaggctgcaggaggagaggatggagagagtgaagctggaggttgag
cttgggagagaaaaggattgcaaccgggttcagctgagtgaaacccgcagggagctccag
gagctgaaggccagcctgagggtcgcccaaaaagagaaggagcagctacttgcagagaaa
caggagttgatggagtacatctgtcagctggagcagaagatgggaacagtggccagtgcc
aagtggagtgttgccccgattgcctctacagggcggcctggcagtgcattatctgactcc
gaggacgagaacccagtggctttgcagcccctccgcccaccaagacctctgggacactac
agcctgtgtgagcagggcgagcctgactccatgctccttgccacccctcctccctccccc
agggaggcggagaggagcgcagtggtcatcaaccagccagccccgctctcctcgccccac
caggccggctctgacactctggcgcacagctctgattcggaggaggaatctgatccactt
cagtgtggaaggcacagctctggagaggaaacagcccttttgctatctgagcacacggac
actgttctcagtgatctggccgacacctcgctatggtaa
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