Micropterus salmoides (largemouth bass): 119905492
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Entry
119905492 CDS
T07309
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
msam04260
Cardiac muscle contraction
msam04261
Adrenergic signaling in cardiomyocytes
msam04270
Vascular smooth muscle contraction
msam04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119905492
04020 Calcium signaling pathway
119905492
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119905492
09153 Circulatory system
04260 Cardiac muscle contraction
119905492
04261 Adrenergic signaling in cardiomyocytes
119905492
04270 Vascular smooth muscle contraction
119905492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119905492
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119905492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
119905492
NCBI-ProteinID:
XP_038578504
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MAANAEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARTLFLFSLKNPFRKACINIVE
WKTFEIIILLTIFANCIALAVFLPMPEEDSNNTNTNLESLEYIFLIIFTLECFLKIVAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFALDTINKIAGVPMEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYATAEGELPAPCAQAGNGRRCSINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWVYFVPLILVGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYIEWITHAEVLDADREGQGLLPLTSGDSDTDSLYGLEGKSRIVYYYR
LARRWNRFFRMKCLVYVKTKGFYWLVMFLVLLNTLTIATEHHHQPDSLTSLQDVASRVLL
VLFVIEMFVKMYALGPRGYFMSLFNRFDFFVVVCGILEMIMLSAGAVAPLGFSVLRCIRL
LRILKVTKYWKSLSNLVASLLNSIRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFSDHRP
RRSNFDNFPQALISVFQILTGEDWTSIMYNGIMAYGGPVFPGILVAIFFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKMRRKLLRSKMPDKTDEERERLAKKLAEQRSK
IEVMPTTAKLKVDEFESNVNEVKDPFPPDDFPGDDEEVEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPQSFRNK
ILAYADIVFTSVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVTVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDLSKMTEEECQGYFLKHMDNSLQDTVLAKREWLNSDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSDEEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDTLNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETNPMQAIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKIALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKKCDPKSDFLPGEEYTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYSTFLLQDHFRKFLKRQEEYYG
YRPSKKSASGPEIQAGLRSIEEEVAPEMHRAISGDLQNEEEMDRAMEEAGEEGIYQRTHG
LFGNRVDSFSSEPASPQPHQMANQRPLQFSESQSESPPTSALTPTTEFFPTTAPKSNTNN
NAFAEFSFEREGSPIEFYNPSEDAEPDLQSWNFTVRTDKTQFPYEPNYGDSQSRSSSTAV
DQLVQEALVKGGLASLAKDPSFVSVTKEMADAMHTTVDDMESVAQGILSERSTSVTSVKK
RRPIPVPPPTVAAAAQGTGEPDPAVRRKRRPIPMTPSVQEAAEADSKV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaatgcagaggcggccaagccggtcatcatgaatgaagaggagctgaagagg
aagcagagggagaagctgaagaagttgcaggccacggggggcaaccctcgaccagcgaga
accctcttcctcttctccctcaaaaatcccttccgcaaggcctgcatcaacattgtggag
tggaaaacctttgagatcatcatcttattgaccatctttgcaaactgtattgcgttggct
gtgttcctgcccatgcctgaagaagacagtaataacaccaacaccaacttggagagtttg
gagtatatcttcttgatcatattcacgttagagtgctttctgaagatagtggcatacggg
ctcgtgttccatgaaggcgcctatttacggaactgttggaacatattggactttgtcatc
gtcttcatgggtctcttcacttttgcattggataccatcaataagatagcaggtgtgcca
atggagaagggtggagggtttgacatgaaggcactaagagccttcagagtgctccgaccc
ttacgtctcgtctctggagtccccagcctgcaggtggtgatgaattccatcctcaaagcc
atgctgcctctgctgcacatcgccctgctggtctttctgctggtcactatctatgccatc
atgggactggagctgttcaagtgcaaaatgcacaagacctgctattacactggcacaaat
atctacgccacagcagaaggtgagctgcctgcaccgtgcgctcaagctggtaatggacgc
cgctgcagcatcaacggctctgagtgtcggccaggctgggaaggtcccaacaatggcatc
acccactttgataacattggctttgccatgcttacagtctaccagtgtatcaccatggag
ggatggaccaaagttctctactgggttaatgatgccataggaaatgaatggccctgggtc
tactttgttcccctcattctcgtgggctccttctttgtgctcaatctggttctgggtgtg
ctcagtggggagtttaccaaagagcgagagaaggccaggtcacgtggagagttccagaag
ttgcgagagcgtcagcagctggatgaagacctgcatggctacatagagtggatcactcac
gctgaagtcctggatgctgaccgagagggccaaggactcctgcctttaaccagtggagat
tctgacacagacagcctgtatggcctggaaggcaagagtcgaattgtctactactaccgc
ttggcccgtcgctggaaccgtttcttcaggatgaagtgcctggtgtatgtgaaaaccaag
ggcttttactggttagtgatgttcctcgtcttactcaacaccctgaccatagcaacagag
caccaccaccagcctgactcgctcacctccctgcaagatgtggccagtcgtgtactgctg
gtgctgtttgtcatagagatgtttgtaaagatgtatgcgctgggtcccagaggatatttc
atgtctctgtttaaccgtttcgacttctttgtggtggtatgcggtatcctggagatgatc
atgttatctgcgggagccgtggctcccctgggtttctctgtactccggtgtatccgactg
ctgaggatccttaaagtcacaaagtactggaaatctttgagtaatcttgtggcctctctc
ctcaactcgatacgctccattgcctccctgctccttcttcttttcctctttatcgttatt
ttctcactcctgggcatgcaggtgtttggggggaaattcaactttagtgaccacagaccc
agacgcagtaactttgacaacttccctcaggccctcatcagtgtgtttcagatcctaaca
ggagaggactggacctccatcatgtacaatggcattatggcctatggagggcctgttttt
cctggcatcctggtcgccatcttctttattgtcctctttgtctgtggaaattatatcctc
ctaaatgtcttcttggccatcgctgtcgacaacctggcagaggctgagagtctgacttca
gctcaaaaagaaaaggcggaggagaagatgaggagaaagctactaaggtccaaaatgcca
gacaagactgatgaggagagggagaggttagctaagaaactggcagagcagagatctaag
atagaggtcatgcccaccactgccaagcttaaagttgatgagtttgagtccaatgtcaat
gaagtgaaagatccattcccacctgacgacttcccaggtgatgacgaggaggtagagcct
gaaatccccattagccctcgcccccgaccaatggccgacctgcagctgaaggaggaagct
gtgccattgcctgaagccagctcctttttcatttttggccctcagaacaagttccgtaaa
ctatgctacaagatcatcaacgcctcgtccttcaccaacttaatccttctgttcatcttg
ctctcctccatctccctggcagctgaggaccctattgatccccagtctttcagaaacaag
atcttggcctatgctgacattgtcttcacatctgtgttcaccattgagattgtactgaag
atgacagtatatggagcattcatgcacgagggctcgttctgccgtaactccttcaacatc
ctggatctgattgtggttacagtctccctgctttctatgggaatggaatccagtgctatc
tctgtggtgaagattctcagggtgctgagggtgctgaggcctctcagggccatcaataga
gccaaggggttaaagcatgtggtccaatgcgtgtttgtggccatcaaaaccattggcaac
atcgtcctggtcaccatgctgttgaacttcatgtttgcctgtattggagtgcaactcttc
aagggtaaattctacagctgcacagacctgtccaaaatgactgaggaggaatgccaggga
tacttcttgaagcacatggataattcccttcaggacacagtgttggctaagagagaatgg
ctcaacagtgacttcaactttgacaatgtgctcaatggcatgctggccctcttcactgtt
tccacatttgagggctggccaaaactgttgtacagagccattgattcagatgaagaagac
atgggtcctgtcttcaacaaccgcgtggatgtgtccatcttcttcatcatctacatcatc
ctcatcgccttcttcatgatgaacatctttgtgggctttgtgatcgtcactttccaggag
cagggcgagcaggagtataaggactgtgagctggacaagaaccagcgtcagtgtgtgcag
tacgctctgaaggctcgtcctctgaggtgctacatccccaaaaacccctaccagtacaga
gtctggtacattgtcacctcctgctactttgagtacctcatgttcttcctaattatgctc
aacaccttgtgtctgggaatgcagcattgcaaccagtcggaccatgtgaccaagctgtcg
gacactcttaacttgatcttcactgtgctcttcactgtggagatgattctcaagctcatg
gccttcaaagcgagaggctactttggagacccctggaacgtctttgacttcattattgtc
atcggtagcgttgttgatgtcatcctgagtgaagttgatactgccctggcctccagtgga
ggactgtactgcctccatggctgtgctgagacaaatcctatgcaagccattgcggcatct
gaaaatgcctctgtttccatcacgttcttccgactcttccgtgtcatgcgtctggtcaag
ttgctgaaccgttcggaggggatccgtaacctgctgtggaccttcatcaagtcctttcag
gctctccctcacgtagctctgctcatcgtgatgctcttctttatctacgctgtcattggg
atgcagatctttggaaagatagctttagtggatggcacccaaatcaaccgcaacaacaac
ttccagacattccctcaggctgttctaatgttattccgatgtgctactggagaggcttgg
caggaggtcatgatggcttcgatgtatgggaagaaatgcgaccccaaatctgacttcctg
ccaggagaggagtacacctgcgggtccaacttcgctgtcttctacttcctcagcttctac
tgtctctgtgccttcctgatcctcaacctgtttgtagctgtcatcatggacaactttgac
tacctgacgcgtgactggtctcttctgggcccacaccatctggatgagtttaagaagatc
tgggctgaatatgacccagaagccacggggagaattaaacatctggacgtggtgacactt
ctgcggcgcatccagcctccactgggctttggcaagttctgtcctcatcgtgctgcatgc
aagcgcttggttggcatgaacatgcccctgaacagtgatggcacggtcaccttcaatgcc
accctgtttgctctggtcaggactgcactcaagatcaaaacagaaggtaactttgagcag
gccaacgaggagctgagagccattataaagcaaatctggaaacgcaccagtatgaaactg
ttagaccaggtcatcccccctataggagatgatgaggtgactgtggggaaattctactcc
actttcctgcttcaggaccatttccgtaagttcctgaagcgtcaggaggagtactatggc
taccggcccagtaagaagagcgcctcgggcccggagatccaggcgggcctgcggagtata
gaggaggaggtggctccagagatgcacagggccatttcaggagacctgcagaatgaggaa
gagatggacagagctatggaggaggctggagaggaaggcatttaccagcgtactcatggt
ctgtttggtaaccgggtggactcattctcctctgaacccgccagccctcagccccaccag
atggccaaccagcggcccctccagttctctgagagccagtctgagtctccaccaacctct
gccctgacgcccactactgaatttttcccaactactgcgccaaaaagcaacactaacaac
aacgcctttgcagaattttcattcgaaagagagggcagtcccatagagttttacaatccc
agtgaggatgcagagccagacctgcagtcctggaacttcacagtgagaacagacaaaaca
cagttcccttatgagcctaactatggcgacagccagagtcggagctccagtactgcggta
gatcagctcgtccaggaggctcttgtaaagggcggtctggcctccctggccaaagacccc
agctttgtctctgtgactaaggagatggctgatgccatgcacacaactgtagatgatatg
gagagcgtggctcagggcatcctcagcgaacgctccaccagcgtcacctcagtcaaaaag
agacgccctatccctgtccctcctcccaccgttgctgcggcagcacaggggacaggtgag
ccagatccggctgtgaggagaaagagacgtccgatccccatgactccttccgtacaggag
gcggctgaggcagactccaaagtttaa
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