Micropterus salmoides (largemouth bass): 119905527
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Entry
119905527 CDS
T07309
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
KO
K14960
COMPASS component SPP1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119905527 (cxxc1a)
03036 Chromosome and associated proteins [BR:
msam03036
]
119905527 (cxxc1a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119905527 (cxxc1a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
119905527 (cxxc1a)
COMPASS/SET1 complex (yeast)
119905527 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
DUF5544
Motif
Other DBs
NCBI-GeneID:
119905527
NCBI-ProteinID:
XP_038578581
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSEEAAGAERGPEEEGGAEGGDGGKEGGGGEGEGGGEVVKGTPKGPVYCICRRPDINCFM
IGCDSCTEWFHGNCVGVSEKAAKAIRVWYCPSCRDKDPSLEIKFRPKKTKEKEEKESEPE
REDKPDGDGSSTLQPKIDKRRGSQIKRSARMCGECDACLRTEDCAQCDFCKDMKKFGGPN
KIRQKCRLRQCEVRARKMLRVKDEEMSRSGGRGRSFSVKGAGHQTEEEEEEEEEQEGVFS
ESELELYEQYKAAGYRDLVWHSEDEDAQSDSLRKKAVKVKHVKRREKKTEKKKSVSAPKE
EVKPRRHKVKQRHRERVRHSERGGEGGAKEVGGALRQCLGPGCVQPARINSKYCSEDCGM
KLAANRIYEILPQRIQQWQQSPCVAEEMGRRQLERIRKEQQAARLRLTLMEKRFHELEGI
IANAKQQQVQQHEEVTEGDGDDTDLQIFCVSCSHPVNPKVALRHMERCYAKYESQTSFGS
MYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVKDVFEPTG
EFCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNLRTAMTNRAGLLALML
HQTIQHDPITTDLRSAKDR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggctgcaggagcagagcgaggcccagaggaggagggaggagcagaggga
ggtgatggaggcaaagagggaggtgggggagaaggagaaggaggaggagaggtggtcaag
ggaacccccaaaggtccagtgtactgtatctgcaggagaccagacatcaactgtttcatg
atagggtgtgacagctgcactgagtggtttcatggaaactgtgttggagtttcagaaaaa
gcagctaaagccatcagagtctggtactgtccgtcctgcagagacaaagacccatctctg
gagattaaattccgtcctaagaagaccaaggagaaagaggagaaagagtctgagcctgag
agggaggacaaacctgatggagatggaagctccaccctccagcccaagattgacaagagg
cggggctctcagatcaagcgttcggccaggatgtgtggggagtgcgacgcctgtctgagg
acggaggactgcgctcagtgtgacttctgtaaggacatgaagaagttcggaggtccaaac
aaaattcgccagaagtgtcgactgaggcagtgtgaggtccgagcccggaagatgcttcgg
gtcaaagacgaggagatgagtcggagtggtggcagagggcggagcttttcagtgaaaggg
gcggggcatcagacagaggaggaagaggaggaggaggaggagcaagaaggcgtgttcagt
gagagcgagctggagctgtacgagcagtacaaagcagctggatacagagacctggtctgg
cacagcgaggatgaggacgctcagtcggactctctgaggaagaaggcggtgaaggtgaaa
cacgtcaagagacgggagaagaagacggagaagaagaaatccgtctctgctcctaaagag
gaggtgaagcctcgtcgccacaaagtgaagcagcgtcacagggaacgcgtgcgtcacagc
gagcgaggcggagagggcggggccaaggaggtaggcggggctttgaggcagtgtctgggt
ccaggatgtgtccaaccggcaaggatcaactccaaatactgttcagaggactgtggcatg
aagctcgccgccaatcgtatctatgagatccttcctcagaggatccagcaatggcagcag
agtccttgtgtggccgaggagatgggacggagacagctggagcgaatcaggaaggagcag
caggcggcgaggctccgcctcacactgatggagaaacgtttccacgagctcgaaggcatc
atcgccaacgctaaacagcagcaggtccaacagcacgaggaggtgactgaaggtgacggc
gatgacacagaccttcagatattctgtgtttcctgcagtcacccagtcaacccgaaggtg
gcgctgagacacatggagagatgctacgctaagtatgagagtcagacgtcgtttggttcc
atgtacccaacacgtatagagggagcgacccggttgttctgtgatgtgtataaccctcag
agtaagacgtactgtaagcggctgcaggttctgtgtcctgaacactccagagacccgaag
gtcccggcagacgaggtgtgtggttgtcctctggtgaaagacgtcttcgagccgacagga
gagttctgccgagtgtctaagaggaagtgtaacaaacattactgctgggagaagcttcgc
cgcgccgaggtcgacctggagagagtccgcgtgtggtataagctggatgagctgtttgag
caggagaggaatctgaggacggcgatgacgaatcgagccggtttattggctctgatgctg
caccagaccatccagcacgacccaatcacaaccgacctgcgctctgccaaggacaggtag
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