Micropterus salmoides (largemouth bass): 119905619
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Entry
119905619 CDS
T07309
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119905619 (clstn1)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Cadherin related
119905619 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
EphA2_TM
V_ATPase_I
PRIMA1
Toxin_R_bind_N
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
119905619
NCBI-ProteinID:
XP_038578735
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRFRGNKQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIITENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATIIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTIDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSATNWTVGLPTDNGHDSDQVF
EFNGTQSIRVPDGLVSTSLKEPFTVSVWMRHGPGAHEKETILCNSDKKEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEFPTVSLFVDGTTFEPFL
VTEDYPLHASKIETQLTIGACWQDNSGHDNDTESVSEPTSGGNARMAQFFRGNLAGLMIR
SGKLENKNVIDCLYTCKEGLDVQLPEEVAAAVKVEFNPNQSALTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDTEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESHEGVTLFPELRIVSTITREVEADTESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHESLEVDVPQLQQHGLEMTSSNLGLVVTGVNTMANYEQVLHLIHYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaataaacaatttgcatccgctgtcggactggtccttggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacgacgtaccac
gggatcataacggaaaatgatgacaaagtacttctggacccccctctaattgcattggac
aaggatgctcctctacgctacgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccacgggcagaatgtcccctttgaggcagtggtcctggacaag
tccactggtgagggggtcatccgggctaaagacaagctggactgcgagctgcagaaggaa
cacaccttcaccatccaagcttacgactgtggagagggacctgatggcgccaacatgaag
aaatctcacaaggccacagtccacatccaggtgaacgacatcaacgagtattcaccggtt
ttcaaggagaagtcctacaaagccaccattattgagggaaagaagtatgacagcatcttg
aaggtggaggcagtggacgccgactgttctttccagtttagccaaatctgcaactacgag
attgtcaccccagatgtgcccttcaccatcgacaaagatggcttcatcaaaaacacggag
aaactgagctatggcaaagagcgcatgtataagctaactgtgaccgcctacgactgtgga
aagaaccgtgcctccgaggacgttctggtcaagatcagcgtcaagcccacctgcaagccc
agctggcaaggcttcaataagaggattgaatatgagcctggcacaggtagcctggccctt
ttccccagcatgcacctggagacctgtgatgagccaatcacgtccatccgagccaatatt
gaactggaaaccaaccatattgggaagggctgcgaccgtgacacctactcggagaagtcg
ctgcacaagctctgcggggcaagctccggcactgtggaacttctgccggctcccagcagc
gccacgaactggacggtagggctgcccaccgacaacgggcatgacagcgaccaggtgttt
gagttcaatgggacccagtccatcagggttccagatggactggtgagcaccagcctgaag
gagcccttcaccgtctctgtgtggatgagacatggccccggggcccatgagaaggagact
atactctgcaactctgacaagaaagagatgaacagacaccactactcgctctacgtccac
aactgcagactgatccttctcctccgccaggatccatcagaggccgagaactacaaacca
gccgagtttcactggaaacttgaccaggcgtgtgacaaagagtggcatcactatgtgctg
aatgtggagttccccactgtgtctctgtttgtggatggaactacctttgagcccttcctg
gttacagaggactacccgctgcatgcctccaagatcgaaactcagctcaccatcggtgct
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacttca
ggtggaaatgctcgaatggctcagtttttccgggggaacctagcagggctgatgatccgc
tccggcaagctggagaacaagaacgtgatcgactgtttgtacacctgcaaggaaggactg
gacgtgcagctgcctgaggaggtagctgcagctgtcaaggtggagttcaaccccaaccag
tcagcactgactgtggagggcgatgacattgacgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttcccgacccctggtatcaggcaccttcgcatctccacc
accgtcaagtgcttcaacgaggagtcctgcgttacggtgccagatactgaaggttacgtg
atggtgctgcagcccgaagagcccaagatcagcctgagcggcattgaccacttcgcccgc
agcgctgccgaattcgagagccacgaaggtgtgacgcttttccccgagctacgcatcgtg
agcaccatcacccgcgaagtggaggccgacacggagtctgaagcggcagagggagctgat
gatgaccctacggtgcaagagactgtggtgtcagaagagatcatgcacaacctggacacg
tgtgaagtgactgtggtgggagacgagctggacggggagcacgagagcctggaggtggac
gtgccccagctgcagcagcacggcctggagatgacttcctctaacctgggcctcgtcgtt
accggtgtgaacaccatggccaactacgagcaggtcctgcatctcatccattacaagaac
tggcacaccgaggctctctttgacaggaaattcaagctggtctgctctgaactcaacggt
cgctacatcagcaatgacttcaaagtcgaggtgaatgtgatccacacagccaatcccgtg
gagcatgccaacaatgccatggtgcagcccaacttcattaaccccgtgcatcatgcctct
gtggatctgtctggtcacaacctggtcaacgctcatcaggcctcagtggttcccagcgct
gccaccgttgtcattgtggtgtgcgttagcttcctggtgtttatgatcatcctgggtgtg
ttccgcatccgtgctgcacaccagcgcactatgagagaccaggagaacggcaaggagaac
gagatggactgggacgactcggcactcaccatcaccgttaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggacggagaggag
gaagacgacatcacgagcgcggagtccgagagcagtgaagatgaggagggcggggagccg
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactag
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