Micropterus salmoides (largemouth bass): 119905640
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Entry
119905640 CDS
T07309
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00310
Lysine degradation
msam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119905640 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119905640 (prdm2a)
03036 Chromosome and associated proteins [BR:
msam03036
]
119905640 (prdm2a)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119905640 (prdm2a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119905640 (prdm2a)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119905640 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2H2_11
zf-C2H2_jaz
Zn_Ribbon_YjdM
zf-C2H2_ZNF462_1st
zf-C2H2_3rep
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
119905640
NCBI-ProteinID:
XP_038578785
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MEDSPHLYISERGDNEDMEEGEDEDISQEETNMEPDLMNSLYPDLHENPNQDTERDWKSF
PCQHCERHFTSKQGLERHMHIHDLGISEAHTHKSSESDMSFGSNLGHLQHEKMNPLNSED
SVMQLQTSSPTSSNTSTLSAGDHTVQPDKQGVLDGHHACKYCEKTFTTHTNKHRHERRIH
EKHLQLTSAEATQLPQEENLQAIFSDASQHETELGEGSAPAAVLENEGEHTEQYMLDVSS
NISENLSFYMDGKIVSTSTVSSCEAAEIHSGSLVRLDALILDPGQISQALNTESVTGKEP
LAKRRTATPPLLPQIKTELESEVVVSSASSSLVSSLIENLLPQNTESTVVQKERTVFLSP
KLKQLLEKQDGLKPTLALITDGQKPCSPVSLSVLPAGTGRFKRRTGSPPSSPQQNPTSNE
ESPMLDMADCDAVSTGQMETQFNASPVHQTANEKDDTTQPVEDPAAKPILSESWPPLTGG
NSCNQQPLDLSNTVKRNEDIALSDAVLDLSLQKKSPGDSELTLKLVSQAALKEGKSNACM
MEKALMNIAEPNVSLGNLEAPLVTDFTIVTGPDMMTPVEPVAEGLVYGLTLPPNSLTPSS
SSLTPIALQTASPCTIAFTSPASHTMLSTAPSLITVLAPPPPISNPSSQPIQVLAPNISP
EPLVICTENALNSSECDFTAAFATTNSANLVTLSQPLDPTLNLPGHVFLTDQIALNPPLV
ESTSVSEVPFTPNITLNDSLINSYNITSNTVLIECTIALEAPGRIVPAAITLQENTAEPP
APSQMVVNHIEQQQIVSVPNPPTVDPTILVSSIAESVTLSTTTSVISDCPTVGEASPNPE
PVVNAEPPTTKEEEADDVTISIPEIPSKSYSEKAEEDESSNNTPSDAQQQTFTKNFICNV
CDKLFHSMKELGRHVGDHADEWPYKCEFCVLLFGKPSTLLDHRSSLHGVGKTYVCSSCTK
EFAYLCNLKQHQEELHPGQQCTYTEEEKGKLRRQNYNNSTKVNTEPSVPDAPEESNKQLK
KEDCEVDVTAEELFTTIKLMASDGGKIKGPDVRLGINQHYPSFKPPPFPYHNRSPAASVA
SATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIPLRH
FAKTQHGVLSTTNPTNGLNASNRPSQSNRSKPNQESPVKVKFKVLKKRKKKLVQRVMPQR
NKSVSSSNKMSPAQVDEQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEVKKRKEGGIS
VTKENVRHLHRGVEEKQASPQHKTRLQTSGTAKRPAILPVQTVFSNKRSKIIIKESMQPK
QETSTLNELPIVRPFNPSMRQYGRVQHSVKGIPIKITIMKPQQTASQKVELPPSHSRDEA
SGAIISSSEQSPTA
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctccccacctgtacatctctgaacgtggagacaatgaggatatggaggag
ggggaggatgaggacatttctcaagaggaaactaatatggaaccagacctgatgaattca
ctgtacccagatcttcatgaaaaccccaatcaggatactgagagagactggaaatctttt
ccctgccagcactgtgaacgacattttaccagcaaacaaggcttagaacgacacatgcac
atccatgatttagggatcagtgaggcacacacccacaaaagcagtgagagcgacatgtct
tttggttcaaatctggggcatttgcagcatgagaagatgaaccctctgaattcagaggac
tcagtcatgcagcttcaaacttcttcccccactagctctaatacttccactttgtcggct
ggagaccacactgttcagccagacaaacagggagtattagacggccatcatgcttgcaag
tactgtgaaaagacatttactacacataccaacaagcaccggcatgagcgcaggatccac
gagaagcacctgcaactcacaagtgcagaagcaacccagcttccccaggaggaaaatctt
caggcaatattcagtgacgcatctcaacacgaaacggagcttggtgagggttcagcacct
gcagctgttctggagaatgaaggggaacacacagaacaatacatgctagatgtctctagc
aatatctcagagaatctcagcttttacatggatggaaagatagtgtcaacaagtacagtc
agtagctgtgaagcagctgaaatccattctgggtctttagttagactggatgcgctgatt
ctagaccccggccagatcagccaggcattaaatacagagtcagttacaggtaaggaacca
ttggcaaaaagaagaactgcaacaccacctcttttaccacaaatcaaaactgaactggag
tctgaggtggttgtgtcttcagcctcatcatcacttgtatcttctttaatagagaatcta
ctccctcagaatacagagtctaccgttgtgcagaaggaaagaacagtgtttctgtcacct
aagttgaagcagctcctggagaagcaagacggcctcaaacctacacttgccctcatcaca
gatggccagaagccttgttcaccagtctctctctctgtcctgcctgctggaaccgggagg
tttaaaagaaggaccggatctccaccgagctcgccacagcaaaacccaacatctaatgag
gaatcgccaatgttagatatggcagattgtgatgctgtcagtacaggacagatggagact
caatttaacgcttcacctgtgcaccaaacagccaatgaaaaggacgacacgactcaacct
gtagaggatccagcagcgaaacccatcttgtcagagagctggccccccttgactggtggt
aattcttgtaaccagcaaccgttggatctctccaatacagtcaaaagaaatgaagatata
gctttatctgatgccgtgctggatttgagtttgcaaaaaaagtccccaggtgactctgaa
ctgacattaaaattagtttcacaggcagctttgaaagaaggaaaatcaaatgcatgcatg
atggagaaagccttaatgaatattgcagagccaaatgtgagcctcgggaaccttgaggct
cctttagtcacagacttcaccatagttacaggtccagatatgatgaccccagtggagcct
gttgcagaaggacttgtttatggacttaccctacccccaaattctctgactccatcatcc
tcctcccttacccctattgccttgcagacagcttccccttgcactatcgcatttacttcc
ccagcctcacacaccatgctttctactgctccttcattaatcacagttttagcgccacca
ccacctatttctaacccttcgagccaaccaatccaggtattagcccctaatatatctccc
gagcccttggtaatctgcacagaaaatgcattaaattcttcagagtgtgatttcactgct
gcatttgccactacaaattctgcaaatcttgtcactctctcccagccccttgacccgact
ctaaatcttcccggccacgtgtttctcactgatcaaattgctctcaatccacctctagtt
gagtccacttctgtgtctgaagtgccattcacacccaatataactttaaatgattccctc
atcaattcttacaacatcaccagcaacaccgtgttgattgagtgcacaatagctcttgaa
gccccggggaggatagtccctgctgcaattaccttacaagaaaacacagctgagcctcca
gcaccatcacagatggttgttaatcacatagaacagcagcagattgtatcagtacccaac
cctccaactgtagaccccactattcttgtgtcctccatcgcagaatcagtaactctgtcc
actaccacctcagtgatatctgattgtcctactgtgggtgaggcaagtcctaacccagag
cctgttgttaatgcagagccaccaacaacaaaagaggaggaagctgatgacgtcaccatt
tccatacctgaaatcccatctaaaagctattctgagaaagctgaagaggacgaatcttca
aacaacacaccaagtgacgcacaacagcagactttcacgaagaatttcatctgcaatgtg
tgtgataagctcttccattccatgaaagaactaggccgccatgtaggtgaccatgccgat
gaatggccctacaaatgtgagttctgcgtgctgctcttcggcaaaccctccactttgctt
gaccatcgatcaagcctccacggtgtcggcaagacttacgtttgcagttcatgcacaaag
gaatttgcatacctttgcaatctgaaacagcatcaggaagaattacaccccgggcagcag
tgtacatacacagaagaagaaaagggaaaactaagacgtcagaactacaacaactcaaca
aaagtcaacacggagccttcagtgcctgacgctccagaggaatccaacaagcagttgaaa
aaggaagactgtgaagtagatgtgactgctgaagagctgtttactacaataaaactcatg
gcttcagatggaggcaaaatcaaagggcccgatgttcgtcttggcattaaccaacattat
cccagctttaagccccctccatttccttaccataacagatcacccgctgcctcagtggct
tcagccacaaacttcaccacccacaacatcccacaaacctttagcacagctattcgctgc
actaagtgtggaaaaagctttgataacatgccagagctacataagcatatcctggcttgt
gcaaacgccagtgataaaaggcggtacacacccaaaaagaatcccatcccactacgccac
tttgcaaaaactcaacacggagttctgtctaccacaaatcctactaatggactaaatgct
tcgaacagaccgagccagtcaaacaggtccaaacctaaccaagaatcaccagtaaaggta
aagttcaaggtactgaaaaaaaggaagaaaaagttggtccaaagggtcatgccacagagg
aacaagtcggtctcttcatcaaataaaatgtcacctgcacaggtagatgagcagcaggag
atttttgtctgcccacactgtagcagggagttcacaatgcgtcgcagcagaaccaaacac
atggctgtctgccccaagaaacctaaagaggtaaagaaaaggaaggaaggaggaatctct
gtgacaaaagaaaatgtcagacacctacatagaggtgttgaagagaaacaagcctcaccc
cagcataaaacacgactccaaacgtctggcactgctaagaggcccgccatcctgccagtg
caaactgtcttttccaacaaaagaagtaaaataatcataaaagagagtatgcagccaaaa
caagagacatccactctgaatgaacttcccattgttcgccctttcaacccctccatgcgt
cagtatggcagagtgcagcatagtgtcaaaggaatccccattaaaatcaccataatgaaa
ccgcaacagactgcgtcacagaaggttgagctgcctccttcccacagccgagatgaagca
agcggagccattatcagtagctctgagcagagtcccacagcttga
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integrated database retrieval system
