Micropterus salmoides (largemouth bass): 119906040
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Entry
119906040 CDS
T07309
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00310
Lysine degradation
msam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119906040 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119906040 (prdm16)
03036 Chromosome and associated proteins [BR:
msam03036
]
119906040 (prdm16)
Enzymes [BR:
msam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
119906040 (prdm16)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119906040 (prdm16)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119906040 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
SET
zf-C2H2_8
zf-BED
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
119906040
NCBI-ProteinID:
XP_038579444
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMYDTEADLLGLAAGGGGGADSPEDDAEDGIISMSPLPSPI
PSHPNNNHHHLLHPHIYATHHHHLHNNSNSSSNDQDFTTPKEGSPYEAPVYIPDDIPIPS
ELELRESSVPGAGLGVWAKTRIDAGERFGLHSTLHHGATGKDSSFGWEQMMNDHEEASPD
SCIKKVVDDMGNVKFALDTGPDGTSWLKYVRSAPSFEEQNLAACHLTGDQIYYKAVRDIE
AGEELLVYMKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSTGSIFD
TLREDFKQEREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSN
LIRHQMSHDSGKRFECENCDKVQHTRHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFAT
SSGLKQHKHIHSSVKPFICPDGLRLFAPPGEVCHKSYTQFSNLCRHKRMHADCRTQIKCK
DCGQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPIMAKAKSHHPHLAGLNQS
GLGFTDYFPSRPHPHAGLPFSTGPHGFPSLPHGFPGIFPPSLYPRPPLLPASSLIKNPLG
CSSQEVKLPRSPLDAPPLSLVSSTNSNGGHSLSQLEDKEKENKLDLSSSGEAKPKSKMAD
MSDCSDLEDVNTTSGTDLDTTTGTASGDGSDLDSDGESERERSGKRRKPSGTVSSQEGHQ
IEDTNSALISAVSCSGNLAIDRPFLSSASSQHSFFPPPDEQALPPTTANANSATTDSIKA
IASIAEKYFGPGLIGLHQEKKMGPLPYHSMFPFQFLPNFHNSLYPIGADRGALNPSMFFK
AEPKSPREQLHKMVSGVPGAPASTAESPFDLTTKPKDTKVAPSTPTNPSNPNSTSGSSSG
TLAISSGEEQPLDLSIGSRNRGGHNGVAAEPQNRKNHIFGIGKGVSIKDETPAGFPHPHS
QLLHQSSMSQHQQPQAQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLDPVGALKEKFLRP
SPPLFHPQMSAMENMTEKLESFGALKLDAPPNSLQHSAHPLFNFRSPPPSLSDAILRKGK
ERYACRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPF
KCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNSEPDNHALLDEKE
DSYFSEIRNFISNSEMNQASSSTDKRSDQAEEEQPPSHSLSNSKLGLQGLEEEEEEVEGD
DEEEEEGSLTEKSHDEAPESPSPVTTGVYEEDEEEEETETAPLAMSYEHTRRCIEEQGSL
LDLEGLPSFPKSLEGLRKAASEEQPFDVKDIFNTSLESEALKETLYRQAKTQVCDWLLDV
L
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgagccagtggacagc
atgtacgacacagaggctgacctcctgggtttagcagccggcggcggaggtggtgccgac
agcccagaagatgatgcagaagacggcatcatcagcatgtcccccctgccctcacctatt
ccttcccatccaaacaacaaccaccaccacctgctgcaccctcacatctatgccacccac
caccaccaccttcacaacaacagcaacagcagcagcaatgaccaggacttcaccacaccc
aaggagggctcgccctacgaggcacctgtctacattccagacgacattcccattcccagc
gaactagagctgcgggagtcctctgtgcccggtgcaggtctgggtgtttgggccaagacc
cgcattgatgctggtgagaggtttggtcttcatagcacgctgcatcatggggccacgggc
aaagacagctccttcggatgggagcagatgatgaatgaccatgaagaagcctcccctgac
agctgcatcaaaaaggtggtggacgacatgggcaacgtcaagtttgcactggacacaggc
ccggacggcaccagctggctcaaatacgtccgctccgccccgtcatttgaggagcaaaac
cttgccgcctgtcacctcactggagaccagatttattataaagctgtccgggacattgaa
gcaggggaggagcttttagtgtatatgaaggacgggattttccccgagggatccatggca
cccaacctacaagacgagcagatgtaccgctgtgaagactgtgatgagctgttctcctca
acactcgagctgcggcggcaccagaagtattcatgctccagtacaggctccatctttgac
acactgagagaagacttcaaacaggaacgtgaggacagcgacgaacccgtccacgagtgt
aaagactgtgagaagatcttcccaaatgagtacagtctgggccaacacatgatagtccat
acagaggagagggagtacaagtgtgaccagtgccccaaagccttcaactggaagtccaac
ctcatccgtcaccagatgtcacatgacagtggcaagcgttttgagtgtgaaaactgtgat
aaggtacagcatacccggcacgtgttcacagatcccagcaaccttcaacgccacatccgc
tcccaacacgtgggggcacgtgctcacacatgtcctgagtgtggcaagacctttgccacc
tcgtcaggcctcaagcagcataagcacatccacagcagtgttaaaccttttatctgccct
gatgggctgcgtctttttgctcccccaggtgaggtgtgccacaaatcatacacccagttc
tccaacctttgccgccacaaacgtatgcatgctgactgccgcacccagatcaagtgtaag
gactgtgggcagttgttcagcactacctcctccctcaacaaacatcgtcgcttctgtgag
ggcaaaaaccattatggctctccagcagggatgttcaaccctggcatccccatgagctcc
agccccatcatggccaaggccaagtctcaccatcctcaccttgcaggtctaaaccagtca
ggtttaggcttcactgactactttccctctcgacctcaccctcacgctggcttgcccttt
tccacaggacctcatggcttcccatccctcccacatggtttcccaggtatcttcccccca
tcattgtatccccgaccacctttattgccagccagttcattgataaagaaccctctgggt
tgcagcagtcaggaggtgaaactgccccggagtcccctagatgcccctcctctgtccctg
gttagctccacaaacagcaatggaggccacagtttgagtcagttggaagacaaagagaaa
gagaacaaactggatttgtcttctagtggagaagccaaacctaaatcgaagatggcagac
atgtctgattgtagtgaccttgaagacgttaataccacaagtgggacagatttggacacc
accactggtactgcttcaggtgacggttctgacctggatagtgatggagagagtgaacgt
gagcgaagtggtaaaagaaggaagccgtctgggactgtgtcaagtcaagaaggtcaccag
atagaagacacaaacagtgcgttgatatcagccgtgtcttgttcggggaaccttgctatt
gatcgtccctttctctcttctgcatcatcccagcactccttcttccctccgcctgatgag
caagccctcccgcccaccactgcaaatgccaattcagccaccacagattccattaaagcc
atcgcctctattgctgagaaatattttggtccaggtttgattggtcttcatcaggagaaa
aagatgggtccactgccctaccattccatgtttcccttccagttcctgcctaacttccac
aactccctctatcccatcggcgctgatcgaggggccctcaatcctagcatgttctttaag
gcagagcccaagtcacctcgtgagcagctgcacaagatggtttctggtgtaccaggagct
cctgcttccacagcagagtcaccatttgatctcaccacaaagcccaaggacaccaaggta
gctccttctaccccaacaaacccctcaaaccccaacagtacttctgggagcagtagtgga
actttagcaatatcaagtggtgaagaacagccgttggaccttagcattggcagccggaac
cgtggtggtcataatggtgtggcagctgagccacaaaatagaaaaaaccacatctttgga
attggaaagggggtctctatcaaggatgaaaccccagctgggtttccacaccctcattcc
cagttactgcaccaatcctcaatgtcccagcaccagcagccccaggcacagccacaccag
ccgccacccctgcactatgccaagccatcagcattcttcatggaccccatatacagcagg
gtggagaagaggaagctactcgaccctgtaggagctctgaaggaaaagttcctcaggccc
tcaccaccactcttccatccacagatgtcagccatggagaacatgacagagaagctggag
agctttggtgctctaaaactagacgcaccacccaattcactgcaacactcggctcatcca
ctcttcaacttccgctcaccgccaccttccctctcagatgccatcctccgcaagggcaag
gagcgttacgcatgcaggtactgcgggaaaatcttccctcgttcagcaaacctcaccaga
cacttgcggacacacacaggggaacaaccctacaggtgtaaatactgtgaccgctcattc
agcatctcatccaatcttcaacgccacgttcgcaacatccataacaaggagaaacccttc
aagtgtcacctgtgcaaccgctgctttggtcagcaaaccaacctggaccgccatctcaag
aagcacgagcatgagaacattcctgtgagccaacagtccgggatgctttccaacctagga
accaccatctcctccccaaactccgagccagacaatcatgcacttttagatgagaaggag
gactcgtacttctcagaaatccgcaacttcatttcaaacagtgagatgaaccaggcctcc
agctccacggataagagatcagaccaggcagaggaggagcagccaccaagccacagtttg
tccaactccaaactagggctccagggcctggaggaggaggaagaggaagtggagggcgac
gatgaagaggaggaggaaggcagcctgacagagaagtctcacgacgaggcgcccgagtcc
ccgagtcccgtcacaacaggagtgtatgaggaggacgaggaggaggaagagacggagacg
gctcctttagctatgagctatgaacacactcgcaggtgtatagaggagcaggggtctctc
ttggacctggagggtctgcccagctttcccaagagcctggaggggttacgtaaagcagcc
agtgaagagcaaccctttgatgttaaagacatatttaacacttcgctagagtcggaggca
ttgaaagagacattgtacaggcaggctaaaacccaggtatgtgactggcttttggatgtc
ctctaa
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integrated database retrieval system
