Micropterus salmoides (largemouth bass): 119906171
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Entry
119906171 CDS
T07309
Symbol
si:ch211-112c15.8
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K05160
tumor necrosis factor receptor superfamily member 25
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119906171 (si:ch211-112c15.8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
msam04050
]
119906171 (si:ch211-112c15.8)
Cytokine receptors [BR:
msam04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119906171 (si:ch211-112c15.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death
TNFR_c6
Peptidase_S58
Motif
Other DBs
NCBI-GeneID:
119906171
NCBI-ProteinID:
XP_038579646
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MDFVLVFPLILAFLSTGQSYTEVTEQTSNSCFEKCPAGYHKIGSCGNLTGQYRCQKCGNN
EYTEIPNLITKCQRCDLCSHIEKEIKSCSFNSNVVCDCKDGYYNANSKSKIRDCRACSSA
RCGVSDVNEDYKRKCNPCQRKECLAYPECERKSTAITIPPSTTTTTSSATSPRTTASNPT
LNLNEMTWLLVVAVMGTGVVLLWLLLIRNQLRYPYSFPCWSVNKDLELSVEDPKFNEQRS
HQVSTPTTLTFKVSEETPMMNLSSTTPEHAAPCSPVLPDTEHKADRRDEQLEHWPAIVLY
TIIKEVPLRRWKEFLRLLSVADQQLERVELEAGLGLGSMERQYQMLRLWSQRSSASLNDV
FSALHYMDLSGCAQLLQESLEKLQCGGLN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtcttggttttcccactgatacttgccttcctttccactggacagagttac
acggaggtgaccgaacaaaccagtaattcatgttttgaaaagtgtccagctggatatcat
aagattggtagctgtgggaatctaactggacagtacagatgtcaaaaatgtggaaacaac
gaatacacagaaataccaaacttaataacaaaatgccagaggtgtgacttgtgtagtcat
attgagaaggaaataaagtcctgctcctttaatagtaatgtggtatgtgactgtaaggat
ggatactacaacgcaaactctaaatccaaaataagggattgccgagcatgcagctctgca
agatgtggagtgtctgatgttaatgaggactacaaaaggaagtgcaatccctgccaaagg
aaggagtgtttggcatacccagaatgtgagaggaaatctaccgcaattacaattcctcct
tctacgactacaaccacgtcttcagctacatctccaagaaccacagcttcaaacccaaca
ttgaatttgaacgaaatgacctggctgttagtcgtggcggttatggggacaggtgtggtg
ctcctttggctcctgctcattaggaaccagctcagatacccatacagttttccttgctgg
agtgtaaataaagacctggagctgtctgtcgaggaccccaaatttaacgaacaacgcagt
catcaagtcagcaccccgaccacactgacatttaaagtatctgaggaaactcccatgatg
aatctcagctccaccacaccagaacatgcagccccctgcagtcctgtgctgccagacact
gaacacaaagctgacagacgagatgagcaattggagcactggccggccatcgtcctctac
acaattatcaaggaggtgcccttgcgtaggtggaaggagttcttgcgtctgctctcggtg
gctgatcagcagctggagcgggtggagctggaggccggtttgggtctgggctccatggag
aggcagtaccagatgctgagactgtggagccagcgctcctctgcgagcctgaatgatgtc
ttctctgccttgcactacatggatttatccggctgtgcccagctgctgcaggaaagcctg
gagaagctgcagtgtggaggccttaactga
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