Micropterus salmoides (largemouth bass): 119906317
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Entry
119906317 CDS
T07309
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119906317 (zeb1b)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
119906317 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
119906317
NCBI-ProteinID:
XP_038579789
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNSVVEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
DEHPREHCWDGVKEDCVSDGEDDVSTDALVEEMLQQGDTAVIYPEAPEDEPQRQGTPDAS
IHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMTVHKSGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRPRLGNAKTQTQAPSPVLHTPPSVLRTQIREKLEH
SKPLQEQLPLNQIKTEPLDYKYEYKPTVITSSAVTAMNGGIFSGGAAAPLQGTVQAVVLP
TVGLVSPISINLSDLQNALKVAVDGNVIRQVLESSAKGQEQVSSGLTAGMLHPSQQQLIS
AISLPIVGQDGNAKIIINYSLDPNQGQLTAQNLKKESETTLPAQTTTDMKLPEDLTIRGT
RPNETKENEEKTTKTCLLCDNCPGGLEALHALKHCKKDGVRLNGAGLDKSDSAVAALLSE
GGLCNQPKNLLSLLKAYFALNAEPSKDELAKISDSVSLPVHVVKKWFDKMQEGQISLGAP
TPPSEEEDTCEAKTVVSLVPGKDTANMSPSVTQDSPTEATPAEVNGTHSSPASPLPLNLT
AGGPVPAQSPQSTEGPLDLSLPKPAREEVERVIAKACVYPSPCSGSTSVEEPLNLTCTKK
EASPLSAIGTSSIALYASQPSAKPLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTANS
PAGTETHEAIHLNRVKEEKLDTCSEGVSTMEEHNDSDSGPQRKKMKKTDSGMYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECSICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKETQSQGRDRESPEEDSEAQAEMEALSRVQGQYLAPSQLDSDER
GSSAREDEESEEDEEEEEEEEEGAVDMDDIQVVQIGDEGGDEEEEEEEKNEEEIQRVLVV
EEGEEEKTEMDMIEEEEEADTRQEEVLGSIQEEEEVTMEEEVAMDPEEGVTEEEKTEGEI
SEESGAETNRNTVSED
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaaccctaggaggaacaacgtg
actaactacaatagtgtggtggaggccggctcagactcagatgatgaggacaagctgcac
atcgtggaggaggaaggcagcctggcggatggggccgactgcgacagcaccctgccagac
gacgagcaccccagggagcactgctgggacggagtgaaggaggattgcgtgtcagacggt
gaggatgacgtgagcacagatgccttagtggaggagatgcttcagcaaggagacacggcc
gtcatctacccagaggccccagaggacgaacctcaacgtcagggcacccccgacgccagc
atccatgacgagaatggaactccggattcgttctctcagctgctcacctgcccgtactgc
gcacgtggctacaagcgttacagctccctgaaggagcacatcaagtaccggcacgagaag
accgaagagagtttcagctgccccgagtgcagctacagcttcgcataccgcgctcaactg
gagaggcacatgacggttcacaagagcggacgggatcagagacacatcacacagtcggga
ggcaatcgtaaatttaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctg
aaggagcacctacgcatccacagtggagagaaaccctatgagtgctccaactgcaagaag
cggttctcccactcaggctcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagttaacggcagaccacgcttggggaatgccaaaacccagacccaggctccatca
ccagtgctgcacacgcccccctcagtcctccgcacccagattagagagaagctggagcac
agcaagcccctgcaagagcagctgcccctcaaccagatcaaaactgagccattggactac
aagtacgagtacaagccgacggtgataacatcttcagctgtgaccgccatgaacggtggg
attttcagtgggggagctgcagctcctctgcagggcacagtgcaggccgtggtcctgccc
actgtggggctggtgtcgcccatcagcatcaacctgtcagacctgcagaatgctctcaaa
gtggcagtggacggtaacgtcattcgccaggtgctggaaagcagtgccaaaggccaggag
caggttagctcggggttaaccgctggaatgctccatccttcgcaacagcaactcatctca
gccatcagtctgcctattgtgggtcaggatggaaatgcaaaaatcattataaactacagt
ttggaccccaaccagggccagctcacagcccaaaacctgaagaaagagtctgagacaact
ttaccagctcagaccaccactgacatgaaactcccagaagatcttaccatcagaggcacc
aggcccaatgagactaaagaaaacgaggaaaagaccactaaaacctgtctcctgtgtgat
aactgtcccggtgggctggaagcgctccatgccctcaagcactgcaagaaggatggtgtc
aggctgaacggagcaggcctggataagtctgactctgctgttgctgccctgctttcagaa
ggaggactctgcaaccagcccaagaacctcttgtccctgctcaaggcctactttgcctta
aatgcagagccctccaaggatgagctggccaagatctctgactcagtcagcctgccagtc
cacgtggttaagaagtggtttgacaaaatgcaggagggtcagatatcactgggtgctcca
acacctccctcagaggaagaagacacctgtgaagctaaaactgtggtgtctctggtccca
gggaaggacacagccaatatgagcccttctgtgacccaggacagccctacagaggccacc
ccagcggaggtcaacggaacccacagctcgccggcctcccccttgccactaaatctgaca
gctggcggtcccgtcccagcccagtctccccagagcactgagggacccctagacctgtca
ctgccaaagcctgccagagaggaagtggagagagtgatagctaaagcctgtgtttacccc
tccccttgctctggctctaccagtgtggaagaaccgctaaacttaacttgcacaaagaaa
gaggcatcgccactctcagccattggcaccagctccatcgcactgtacgccagccagcca
agtgcaaaacccctcgacattgtgaccacgatgcaatgtctaagggcactagccactaac
aacaaacagactatcctgatcccccagctggcttacacctataccactacagcaaacagc
cctgcagggaccgagacgcatgaagccatccacctcaacagagtgaaggaggagaagctg
gacacttgctcagagggcgtgtccaccatggaggagcacaacgactccgactccggccct
cagaggaagaagatgaagaagacggacagcggcatgtacgcctgtgacctgtgcgacaag
atcttccagaagagcagctcgctgctgagacacaaatatgaacacacagggaagcgacct
cacgagtgcagcatctgcagcaaggccttcaaacacaaacaccacttgatcgaacacatg
cggctccactcaggagagaagccataccagtgtgacaagtgcggcaagcgcttctcccac
tcaggctcctactctcagcacatgaaccaccgctactcctactgtaagaaggagacacag
agccaaggcagagaccgggagagccctgaggaggacagcgaggcccaggctgagatggag
gccctgagccgggtgcaggggcagtacctggccccgtcccagctggactcggacgagcga
gggagcagcgccagagaggatgaggagagcgaggaagacgaggaggaagaggaggaggag
gaggaaggtgcggtggacatggatgacatccaggtagtgcagataggggacgaaggaggg
gacgaggaagaggaggaggaagagaagaatgaggaggaaatacagagagtattggtcgtg
gaagagggagaggaggagaagacagagatggacatgatagaagaagaagaggaggctgac
acaaggcaggaggaggtgctcgggagcattcaggaagaggaggaagtcacgatggaggaa
gaggtggcgatggatccagaagaaggggtgacggaagaggagaaaacagagggtgagatc
tcagaggagagtggagccgaaactaacaggaacacggtttctgaagactag
DBGET
integrated database retrieval system
