Micropterus salmoides (largemouth bass): 119906549
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Entry
119906549 CDS
T07309
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119906549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119906549
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
119906549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
119906549
NCBI-ProteinID:
XP_038579842
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
LSMAGLWQQLSSLWQVRAPALLHLICLLYLTSDALPSDTKASPPPLERFQVVKGNFSRIF
LHVGYHKVAEIPAGARNISIQETIKSRNYLALQTKSGLSIINGNWVIDRPGIFIAVGTRL
TYQRPNEIRSRNGESITAPGPLIEDLHVYLIYQQPGPNVYYEYSVPLQMAHSTPEPDAPS
DIQPLVQTIGPSHSSEEVTSNGIIKEELHPNQVLPDPSSNSDPWPTYTWTKSGRRECSTT
CGTGRRQVLWECVEKDSQATVPADLCDPALEPTNREENCNTQSCPPYWDVGEWSECSRSC
GPGTQRRQVICRQVTHAHANGTETSVTVAPELCGTSDRPVTKSTCQLKICSQWEIQSEWS
PCSVPCGVGQRSREVVCVSNQGDEEEDEECNMNLKPDTLQNCDMGACASSWFSSLWSQRC
SAECGRGNRTRTTVCLIDHVTDLPLESCEGERPPEVTLCDSGPCQNRLEWYTGPWGQCSA
ECGNGTQTRSVACIFNNNGHMKVVDQLKCSSLSQPITAQPCRLKPCGVQWYITEWSACSR
SCSGGYRVREVRCLADNIVPSDRCDPSLTPESREECNKQPCLAEINPSCGDQYHNCMVVV
QARLCIYPYYRSVCCASCSQKTYPNAFQKNHIRR
NT seq
1906 nt
NT seq
+upstream
nt +downstream
nt
tctctccatggctggattgtggcagcagctcagctccctgtggcaggttcgagctccggc
tctcctccacctcatctgtcttctctacctaacctcagatgctcttccctcggataccaa
agccagcccaccccctctggagaggtttcaggtagtgaaggggaatttctctcggatttt
cctccatgttggctaccataaggttgcagagattcctgcaggagcacgcaacatcagcat
acaggagacgataaagagccgaaactacctggctctgcagaccaaaagtggtctctccat
catcaatggcaactgggtgattgacaggccagggatctttattgctgtaggaacacggct
gacgtaccaacgacccaatgaaatccgctctcgcaacggggagtccatcactgcacccgg
gccgttgattgaggacctgcatgtttatttgatctaccagcaaccaggtcccaatgtata
ctatgaatacagtgtgcctttacaaatggctcactccactcctgaaccagacgcaccttc
tgatattcagcccctggttcagacaataggcccatcccactcaagtgaggaggtcacaag
caatggcatcatcaaagaggaactccaccctaaccaggttctccccgaccccagctcgaa
ctctgacccttggcccacctacacctggacaaagagtgggcgcagagagtgcagcacaac
ctgtggcactggcaggcgtcaggtactctgggagtgtgttgagaaagattcccaggcgac
tgttcctgctgacctctgtgaccctgcccttgaaccaacaaaccgggaagaaaactgcaa
cacccagtcctgtcctccatactgggacgtgggggagtggtcagagtgcagcaggagttg
tggacccggcactcagcgacgccaagtcatctgccgccaggtcactcatgctcacgccaa
cgggactgagacctcggttactgtggcaccagagttgtgtgggacatctgataggccggt
gaccaagtcgacatgtcagctaaagatttgcagccagtgggagatacaatctgagtggag
cccgtgttcagtgccatgtggggtgggccagcgcagcagggaggtggtgtgtgtgagcaa
ccagggtgatgaggaggaggatgaggagtgcaacatgaacctgaagccggacacactaca
gaactgtgacatgggagcctgtgcaagcagctggttcagctccctctggagtcaacggtg
ctctgcagagtgtggtcgaggcaatcgaacccggacgacagtgtgccttatagatcacgt
gactgatctcccactggaaagctgtgaaggggaacgcccaccagaagtgacactgtgtga
ctctggcccctgccagaaccgcctggagtggtacaccggaccctggggccagtgttctgc
agagtgtgggaatggcacacagacccggagtgtggcttgtattttcaacaacaacggtca
catgaaggttgtggaccagttaaaatgttccagtctctctcagccaatcacagctcagcc
ctgcagactgaagccatgtggtgtccagtggtatatcacagagtggagtgcatgttcacg
ttcctgcagcggtggctaccgtgtgcgtgaggtgcgttgtcttgctgacaacattgtccc
aagtgaccgttgtgaccccagtttgacccccgagagccgagaagaatgcaacaaacaacc
ttgtttagcagagataaatccatcttgcggcgaccagtatcataactgtatggtggtggt
tcaagccagactctgcatttacccttactatagaagtgtctgctgtgcttcctgctccca
gaaaacataccccaatgcatttcaaaagaaccacatccgcaggtga
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