Micropterus salmoides (largemouth bass): 119906664
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Entry
119906664 CDS
T07309
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03271
Virion - Rotavirus
msam04145
Phagosome
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04514
Cell adhesion molecules
msam04530
Tight junction
msam04810
Regulation of actin cytoskeleton
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
119906664
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119906664
04514 Cell adhesion molecules
119906664
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119906664
09144 Cellular community - eukaryotes
04510 Focal adhesion
119906664
04530 Tight junction
119906664
09142 Cell motility
04820 Cytoskeleton in muscle cells
119906664
04810 Regulation of actin cytoskeleton
119906664
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119906664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119906664
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119906664
04515 Cell adhesion molecules [BR:
msam04515
]
119906664
04090 CD molecules [BR:
msam04090
]
119906664
Membrane trafficking [BR:
msam04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119906664
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119906664
Cell adhesion molecules [BR:
msam04515
]
Integrins
Integrin beta subunits
119906664
CD molecules [BR:
msam04090
]
Proteins
119906664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119906664
NCBI-ProteinID:
XP_038579884
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDLKLLLVLSLLGVFCYSNAQKEGNECINANAKYCGECIQAGAKCGWCKDPNFLKQGETV
STRCDELQSLIKRGCDNAMIENPRGDQKTLKNKTVTHRRKGAEKLKPEDITQIQPQKLSL
TLRSGEPQSFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKMLNPCTGDQNCTSPFSYKNVLKLTSDGKRFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYTSRCKNGVVSVGENGRKCSNISIG
DEVTFSISVTSKGCPKQGKPETIKMKPLGFTEEVEITLNFICECECHKDGIKNSPLCHFG
NGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNSTDICSNNGDCVCGTCECKK
RDNPEERYSGQYCECDNFNCDRSGNKLCGGHGRCECRVCICDPMWTGSACDCSLDNSTCM
ASNKQICNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECIECRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPNVPSYPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVE
TLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGE
NPIYKSAVTTVINPKYEGK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctgctcttggtattgtcattgttaggagtcttttgttacagcaatgct
cagaaagaggggaatgagtgcatcaatgccaacgccaaatactgcggggaatgcatccag
gctggagccaaatgtggctggtgtaaagacccaaacttcctgaaacagggtgagaccgtg
tcgacccgttgtgacgagctacaatctctgataaagaggggctgtgataatgcaatgatc
gaaaacccgcgcggggatcagaagaccctcaagaacaaaactgtgacacatcgcagaaag
ggggcagaaaaactgaagccagaggacatcactcagattcagccccagaaactaagcctc
accctccgatctggtgaaccccagtcttttgacttgaagttcaaacgagctgaagattat
cccatcgacctgtactacttgatggacctgtcctactccatgaaggacgatctggagaac
gtcaagaacctgggaaccagtctgatgctggagatgtcaaagattacctctgacttcagg
ataggttttggttcctttgtggaaaagacagtcatgccgtacatcagcaccaccccggcc
aagatgctgaacccatgcacaggcgaccagaactgcaccagcccgttcagctacaagaat
gtcctgaagctgactagtgatggcaagaggttcaacaccctggtgggccagcagcacatc
tctggaaacctggactctcctgaggggggctttgatgccatcatgcaagtggctgtgtgt
ggggagcagattggttggaggaatgtgactcgtctcctggtgttttccactgatgctggc
ttccactttgctggcgatggcaaactgggaggtattgttctacccaacgacgggaaatgt
cacttggagaacaatatgtataccatgagccactactatgattacccctccattgctcac
ctggttcagaagctgagcgacaataacattcagaccatctttgcagtcacagaggaattc
cagcctgtttaccaagagctgaaaaatctgataccaaagtctgcagtgggcactctgtct
gccaactcaagcaatgtaatcaacctcattatagacgcttacaattctctctcatctgag
gttattctggagaacagcaagcttccagagggagtgaccataacttacacatcccgctgt
aagaacggagtggttagtgtgggcgaaaatggacggaagtgctccaacatctccatcggg
gatgaggtcacatttagcatcagtgtgacatctaagggctgtccaaaacaaggcaagcct
gagaccattaagatgaagcccctgggattcacagaggaggtggagattaccctcaacttt
atctgtgagtgtgaatgccacaaggatggtatcaagaacagtccactctgccactttggt
aacgggacctatgaatgtggagcctgcaagtgtaatgaaggacgtgtgggcagacagtgt
gaatgcagcagcaatgatgtggccacagaggacatggacaggacctgccgtaaagacaac
agtactgacatttgtagcaacaacggagactgcgtgtgcggcacatgtgagtgcaagaaa
agagacaaccctgaggagaggtacagcggccagtactgcgagtgtgacaacttcaactgt
gaccgctccggaaacaaactgtgtggagggcatggacgctgtgagtgcagagtgtgtatc
tgtgaccccatgtggactggaagtgcctgtgattgttctctggacaacagcacatgtatg
gccagcaacaagcagatctgtaacggtagaggaacttgtgaatgtggtacttgcaagtgc
actgaccccaaattccagggtcccacctgtgagacttgccctacctgtcctggagtctgt
actgaacacaaagagtgcatcgagtgccgggcgtttggcactggtgagaagaaggacaca
tgtgagagagactgcagctacttcaacttgattaaagtgaaggacagggacaagctaccc
cagcccaacgtcccctcctaccctttgatgcactgcaaggagagggacgccaatgactgc
tggttctactacacctacgctgtcaacaacaacacagagaaggaggtccatgtggttgaa
acgctggaatgccccgccggtcctgacatcatccccattgtggcaggcgtggtcgccggc
atcgtcctgattggcttagccctgctgctcatctggaagctgctgatgatcatccatgac
aggagagagtttgccaagtttgagaaagagaagatgaacgccaaatgggacacgggtgaa
aatccaatctacaaaagtgctgtcacgactgtgatcaatcctaaatatgaaggaaaatga
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integrated database retrieval system