Micropterus salmoides (largemouth bass): 119906686
Help
Entry
119906686 CDS
T07309
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04144
Endocytosis
msam04520
Adherens junction
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119906686
09144 Cellular community - eukaryotes
04520 Adherens junction
119906686
04530 Tight junction
119906686
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119906686
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119906686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
119906686
NCBI-ProteinID:
XP_038579923
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGSIEVHNLIEQAAMRYKKAIAKDPSYWVQVHRLEHADGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFASDLSSASAFQPYQVN
SEIEVTPSALRSNMPLHVRRNSDPSLADIAPGEVPVGPEEPSRKNPTRWSTTAGFQKYNH
KPNTSTETGSLEQKGRGGHAYRSLPRDASGWTTQFQREMTRSSLSANHPMVDRWLDRQEQ
EEEEDERRKQERRIERIEPVGRADSSLEHSPVLSLEGMLKPVEVSNEGGPLGIHVVPFSS
LDVRTQGLLVKRLEPGGKAEQEHLFQENDCIVKINQGEIRNLRFEQAQNIFKQAMRCPVI
VFHIVPAAMKRQYELLLAQTELSPPQSTRVRFSQDSQQPGDRSSLVGGLMSRSAPQPGLN
HNHQGPLGGSTPEPNRRYTTLPQTLVSRTSPTPSPSLQRRVSTNPSTSSYLKTKGRRFNI
QLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVSGVDLNGK
SQEEVVAVLRATPMGGTVNLLVIRQEDSLLPREVQQEEDDMVLTPDGTQEFMTFEIPLSD
SGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMTN
QDAMETLRKSMSVEGNKRGMIQLIVARRVSKNNEEAPGSPPILELPVNSLLDNHERRISH
SLYETIEGLDNISTPLTNMIGRIGNYQLSPTVNMPQDDIVMIEDDRPPLLPAHLSDQSSS
SSHDDIGFVGENPVPWIHELPDQNECSLSPDADPDGSFQREGFGRQSMSEKRTKQYENAS
ELEIIRNRKSKSMDLGSAEQEVGPSLGLKKSSSLESLQTAVAEATLNGELNVRRPRSRIV
RGRGCNESFRAAIDKSYEKAGVTAAEEENSMEILDEDTEGSSRSGRESMSTSGDLNVGPG
LNGNLSKDDRQKDQDKAGGKEKKKPEREKEREKDKDKNKAKKGVLKGLGEMFRFGKHRRD
ERPGDRMERKGSSKSKVEDMQASEEETLRMRLEQERIQAKTREIRERQAKERDYAEIQDV
VSRTFSSDEEHTYAGIGSLDSSVDSSSMEPYNHHYHLPQSPQSPHLPLSLQDNGPPLEAL
YAQVNKPRNGRPAAPDSSQVAPSNHDRIQRLRNEFQQAKHEEDIEDRRHTYSFNQSRVSN
GTETQSGRHSVTVVETQVQKQEDRDGFQQAHRQYSSLPRQPRKNPGIVSQDSWGKMYMPA
VGFQTSKENPRYSSSQGSHNGYLGTSSFNARVLLETQELLRQEQRRREQEANKARPPPAQ
ETPSGSTYDHKRDPTQAPGSAPMQAPPQSKGPYRQDVPPSPSQLAKLTRLHGSEKGRLFY
S
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgtttcgggaggacccgggtggtcgttccgtgtggagatgggagt
atagaagtccacaaccttatcgaacaagcggccatgagatataagaaggcgattgcaaag
gaccccagctactgggttcaggtccacaggttggaacatgcagatggaggcattttggac
ctggatgacatgttatgtgatgtggtggatgacaaagataggctggtagcagtatatgaa
gagcaagatcctcacaatggaggcgacggtaccagtgccagctccacaggtacccagagt
cctgaacccttcgctagcgatttgagttcagcatcagccttccagccctaccaggtcaac
agtgagatcgaggtcactccatctgctctgcgatccaacatgcctctccatgtccgtcgc
aacagtgatccctccctggctgacattgctccgggcgaagtcccggttggtccagaggaa
ccgtccagaaaaaacccaactcgctggtccacaactgctggcttccaaaagtacaaccac
aaaccaaacacaagcactgaaaccggcagcctggaacaaaagggtagaggaggccatgcc
tatcggagtcttcctcgtgatgcgagtggctggaccactcagttccagagagagatgact
cgatcttccctcagtgccaaccatccaatggtggacagatggcttgaccgacaggaacag
gaagaggaggaagatgagcgaaggaaacaagaaaggaggattgagcggatcgagccagta
gggagggccgattcgtcactggaacattcacctgtgttaagcctagaaggcatgctcaag
ccggtcgaggtgtccaatgaaggagggcccttggggatccacgtagtgcctttcagttcg
ctggatgtcaggactcagggcttgctagtgaagcgtctggaacctggtggcaaagctgaa
caggagcatctcttccaggagaacgactgtattgtcaaaattaaccagggagagattcgc
aacctgcggttcgaacaagcccagaacattttcaagcaggcgatgcgttgtccggtgatc
gtctttcacatagtccccgcagccatgaagaggcagtatgagctgcttttggcccagacc
gaactcagcccgccccagtccaccagagtccgctttagccaagactctcagcagccggga
gacaggtccagcctggtgggcgggctgatgtccagatctgcaccacaaccaggcctcaat
cacaaccaccagggaccattgggaggaagcaccccagagccaaaccgacggtacaccaca
ttaccccaaaccttggtctctagaacctcaccaacgccctccccctccctgcagcgcaga
gttagcacaaacccatccaccagctcctacctaaagaccaaaggccgcagattcaacatc
cagctgaagaaaggtcctgagggtcttgggttcagcatcacatccagagatgtccctatt
ggtggcagtgctcccatttatgtcaaaaacatccttcctcgaggggccgccatccaagat
ggacgattaaaagctggagaccggctgctggaggttagtggagtggacctgaatggtaag
agccaggaagaggtggtggctgtgctccgagccacgcccatgggtggcactgtaaacctg
ttggtgattcgccaagaggactccctgctgccccgagaagtgcagcaagaggaagatgac
atggtgttaacccctgatggtacgcaagagttcatgacctttgagatccctctgagtgac
tcgggctcagcaggccttggggtcagcgtcaagggtaaccggtccaaggagaaccatgcc
gacttggggatctttgtgaaatctattattaatggaggtgctgctagcaaggatgggcgt
ctacgagtcaatgaccaactcattgcagtcaacggggagtcgttgcatgggatgaccaac
caggacgcaatggaaacgctgcgcaaatccatgtctgtagagggcaacaagcgagggatg
attcagctcatcgtggcccgacgtgtgtccaaaaacaatgaggaagcccctggcagccct
ccgattttagagcttcccgtgaactctctactggacaaccatgagcgccggatttcccac
tccctctatgaaaccatcgaaggcctggacaacatctccacaccgttgactaatatgatt
ggacgcattggtaactaccagctctctccgactgtgaacatgcctcaggacgacatagtg
atgatcgaagatgataggccgcccctgcttcctgcccacctttccgaccaatcatcctcc
agttcccacgatgacattggctttgtgggagagaacccggtgccctggatccacgagctg
cccgatcagaatgaatgttcgctcagtccagatgcagaccctgatggttcgtttcagagg
gaaggttttggccgccagagtatgtcagaaaaacgcaccaaacagtatgaaaatgcttct
gagctggagatcatcaggaatcgcaagtccaaaagcatggatctaggttctgcagaacaa
gaggtaggaccctcactgggcctgaaaaagtccagctcccttgaaagcctccagacagct
gttgccgaggcaaccctgaatggtgaactcaacgtccgcaggccgcgctcacggatcgtc
aggggccgtggctgcaatgagagtttccgagctgcaattgacaaatcatacgagaaggct
ggtgtcacagcggcagaagaggagaacagcatggagatattggacgaggacacagaggga
agttccagatcaggtcgtgagtcgatgtccaccagcggcgacctcaatgtgggccctggg
ctgaacggcaacctctccaaagatgacagacagaaagatcaggacaaggctggggggaag
gagaagaagaaacctgaaagggaaaaagagagggagaaagacaaggacaagaacaaagcc
aagaaaggcgtgctgaagggcctgggtgagatgttcaggtttggaaagcaccggagggat
gagcggccaggagacaggatggagaggaagggctccagtaaatctaaagtcgaggacatg
caggcgtcagaagaggagaccctgcggatgaggctggaacaagagagaatacaggccaag
acaagggagattcgggagaggcaggcaaaggagagggactatgccgaaatccaagacgtt
gtcagtcgcaccttcagctcagatgaggagcatacgtacgctggcatcggatcattagac
tcgtcggtggatagcagcagcatggagccttacaaccaccactaccatctccctcagagt
ccccagagccctcaccttcccttgagccttcaggacaatggtccacccctcgaggctctg
tatgcccaggtcaacaagccacgcaatggacgccctgcagctccagacagcagccaggtg
gctcccagtaaccatgaccggatacaaaggctgaggaacgagttccagcaggccaagcac
gaggaggacattgaggaccgtcggcacacctacagtttcaaccagtctcgggtgagcaat
gggacggagacacagagcggacgccattcagtaacagtagttgagactcaggtccagaaa
caagaggacagggatggtttccagcaagcacacaggcagtacagctcccttccacggcaa
cctcgtaagaaccctggcatagtgtcccaggactcatggggcaagatgtacatgccagca
gtcggattccagacatccaaggagaaccctcgctactccagcagccagggatcacataac
ggctacctgggaacatccagcttcaacgcccgtgttctcttagagactcaggagctgctg
aggcaggagcagagacgccgagagcaggaggccaacaaggcgaggccacctcccgcacag
gaaacccccagcggcagcacctatgaccacaagagagaccccactcaggcccccggctct
gccccgatgcaggccccacctcaatccaagggcccctacagacaagatgtacccccttca
ccttctcagctcgccaagctcaccaggcttcatggttcagagaaagggaggctgttttac
tcctga
DBGET
integrated database retrieval system
