Micropterus salmoides (largemouth bass): 119906837
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Entry
119906837 CDS
T07309
Symbol
cica
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119906837 (cica)
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119906837 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
119906837
NCBI-ProteinID:
XP_038580180
LinkDB
All DBs
Position
Unknown
AA seq
2522 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGVGDAPEGGEKRDSDENRNRSRSPQNRTPSSSNSHSE
SPQADPIRARDTLEGEGIHREGLSETTVSLVMNSGKFLTSSDDRSGRSVVSGSSHSDSGG
SSCSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCSSTTGNHSNPSSSTPPPLPL
SGGIINHELTGSGSDICVSHPDGNNHSRSLMDNFHSRTTGRDGPQDNSPGPPPLSLGGER
ERPGRGEGVRDAERVSPSPLPRCSSTDTASEHSADLEVVGDTHTPTQMSTHAPPTLPDAL
SDALAKGLKNQRVLARQLRTRSDEEGGSERDEGRSSDLVFRAGVVRKVSGEFGSLEVQLN
GEKTLCRYPYQHDSPPGVVDIILDAPPPGVHPIPMGTRVCVPFGNEEGSEGQWQWYREGV
VTQVDTHPAVANRYRVLLSEERSHSADEEEDGRGAAAATQAVWVSRQTLRLLVPPWDLDL
PSGGGRDVEEGVRDKEREREDREEMDVEQEVCRLSRGLTPSVGSVLGRGMPYPGMVPVSS
TAGHNIASPVTPVSVLSLVPGREWEIEKDLERERDLQRKQDRERERERERENSAMQQQQQ
QQQQQHHPYMPLTPEEDMEVSHFNMVPMGAIIPGVKPMAVPQHRHIVSKPPPGYLNPHLS
VVRGIGIPPAHLTLNPHPPPSPVLLGLDPATAAAAAAGAVIATPQLPPLPPISSSTASSS
RVEKASGGGSTSGGAGGGSGSGSCSTSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNG
KQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRERGGASSTGTLTPSDLRLSG
GRASSEFDWDETSRESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLGGS
RSGTPSFSPISNQSPFSPTPSPSPSPLFGFRPANFSPITASASLPPRRHRQLSGTKMGTP
GAERERHLSGIVPTFQTNLTFTVPMSPSKRKLDTHPPPPLPAVQDYQTKPEQQQLVGIGG
GVVGDPNVGHSPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPP
SPLPQEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRREKSRSREHSQPQHTAPPGLQ
VPVPINGATTNGAVLLRNPTSTLVLVTSSSSLTPATVGHTALSSPSTPGSMPTSSSSVLS
SSGSGGRERERKPEGHQDASGGALPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGRP
GTVWTNVEPRSVPVFPWHSLVPFLEPSQSGAAAQPADGQQLVNQSKEPRCAVALVSDGRT
GPPDLERGSPSCPPPTNDNPPTDRGVADSETESDTDDPFSPGVANDPAPSTGPMKRRTQS
LSALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGP
NEKQQYHDLAFQVKEAHFKAHPDWKWCNKDRRKSLSEGRGTPKEQRERSMSESIDAHPDS
QVLEGKGGVSGWPGGSERRGGLFLGQHPRPRAFSQSAVHTLEQREREGDLEKEDGSSLFR
HRPLPQSLYQGGVSEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDE
PDGQHGFQPVARSSLPSSSPSMPHSNSTSAKGNGGGGGGEEGSERKRTRGTDGGEEGSEG
GSKSEEGSGRGGQSVSSLSITGSTSSTQAPLALAQQGLTQVLGTARMAPTMVTNVVRPIA
STPIPITSKPVEGAVTLSSHAQDKKATLLIGGGGPQQLPITAGGGYLSSSSSPGPVSVTP
LGGSGLVTSLVLGGSFPAAQPVQILTPAQPHAQTPLPILQPQLHPTAATSSLTPAAGPKP
LAQVQYILPTESPSSPQLTHQQILSLPTTAALANGMHTGAGIRVASVSPGTRVQTQSPVL
QSKMLVPMATVRTGSTPPHPSISLVAPPLPVQNGPTTGNKIIQIAPMPVVQTNIHPSGSA
AVHPGSPFPVSMATVMAPVAAPPQTVLLTSPPTRITYVQSGPGGTTATPQQATPAPCPTY
LPSSLATLGFTAIAPAGQTLVQPLIGQPPLLAPAPPLGSPGQASGTAGRQVLTAIYPAPT
VALATGVVSVTTMPPAVATPAQDVINPSSPLATGVQGSAAASPQANVTMDVQPKVEVKRE
SQLDEDGGHGLPSCAVSLSVATCMSNATAVKKEEDICLHIKEENLRDGHSRETRSEMDRE
RERGMKENSEKKGGRETDREDYSMADSSKEAGPHSPPPPPSGLDPPPPPPAEREPPSSSK
KTKFRPPPLKKTPDSLDKVLSETYFEERFAELPEFNPEEVLPSPTLQSLATSPRAILGSY
RRKRRNSTELELTAEDPSSPRRKTRRLSSCSSEPNTPKSAAKCEGDIFTFDRPGTEGEDL
LGDLDRVPYSSLRRTLDQRRTLVMQLFQEHGFFPSAQATAAFQARYSDTFPTKVCLQLKI
REVRQKIMQTATPGTLELGGSAEANLAPPHSSSFNQSAREDGGAEQQGDKGRSPEEPKSE
GS
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaaaaagcagggccggcgctctcctccctccactcgggccaaagggggg
aagcgccgcggagtgggggatgccccagaaggaggggagaagagagattcggatgaaaac
agaaacagaagcagatccccacaaaatcgaacaccctcttcttctaattcacactcggag
tcccctcaggcagacccaatcagagcacgggacaccttagagggggaggggattcacaga
gaagggctgtcagagacgacagtatcccttgtaatgaattctgggaaatttttgacatcc
tcagatgatagatccgggaggtcagttgtgagtggcagcagccacagtgacagtggtggt
agtagttgtagtaacagtagtacaccaagcgccaacaacagcccaaaccccgcctcaagc
cgaaaaacagccaccttcaaggctcgcgttcccaagaaaaagtacacgtctgaacactgc
tcgtctaccactggtaaccatagcaacccttcctccagcacgccccctcctcttcctctt
agtggtgggatcatcaaccatgagttaacgggttcaggaagtgacatctgtgtctcgcac
cctgatggcaacaatcacagtcggagcctgatggacaacttccacagcaggaccactggc
agggatgggcctcaggataactctccaggacccccacccctgtcactgggaggggagagg
gaaagacctggaagaggtgaaggggtaagagatgcagagcgagtgtcgcccagtcccctg
cctcgctgttcctcaacagacaccgccagtgagcactcagctgacctggaggtagtcggc
gacacacatacccctacacagatgtctacacatgcaccacccactctccctgatgctctg
tcggatgccctggccaaagggctgaagaatcagcgtgtcctcgcccgccagcttaggaca
agaagtgacgaggagggaggtagtgaaagggatgaaggaaggagttcagacttggtgttc
cgggctggggtggtccgtaaggtcagcggtgaatttggaagcctggaggtacaactcaat
ggggagaagacgctgtgccgttatccgtatcaacatgacagccccccaggggtggtggac
attatccttgatgccccgccccccggtgttcatccaatacctatgggcacccgcgtctgc
gtgccatttggcaatgaggagggcagcgagggccagtggcagtggtaccgagagggtgtg
gtgacccaggtggacacacaccctgcagtggccaaccgctaccgtgtcctgctgtctgag
gaaagatctcactctgcggacgaggaagaggatggcagaggggcagctgctgctacccag
gcagtgtgggtctcccgacaaacactccggcttctggtgccaccatgggacctggatctg
ccttctggaggaggacgagatgttgaagagggggtcagagacaaggaaagggaacgggag
gacagggaggagatggatgtggagcaggaggtgtgtcgtttgagcagggggttgacaccc
agcgtggggtcggtgttggggagaggcatgccctacccaggcatggtccctgtgtcctcc
acagcgggccacaacattgcctccccagtaaccccagtgtccgtcctcagcctcgttcct
ggccgagagtgggaaattgagaaagacttggagagagagagggacctacagagaaaacag
gatagagagagggaaagagagcgagaaagggagaacagtgcaatgcaacagcagcagcag
cagcagcaacagcaacaccacccatacatgccactcacccccgaagaagacatggaggtg
tcccactttaacatggtcccaatgggggcgatcatacctggggtcaaaccaatggcagtt
ccccaacaccgccacatagtctctaagcccccgcctggctacctcaatccgcacctgtct
gtggttcggggcatcgggatcccccctgcgcacctgaccttgaaccctcatcctcctcct
tcacctgtcctgttaggccttgacccagcaaccgcagcagctgcagcagctggtgctgtc
attgccaccccccagctccctcctctccctcccatctcatcttccacagcatcctcctcc
agagtagagaaggcctcgggaggagggtctaccagtgggggagcaggcggtggcagtgga
tccggatcatgttcaacctcttcctcacgttcccgcaccccactgacagctgcccagcaa
aagtacaagaagggagatgtggtgtgcacgccaacaggcatccgtaagaaattcaatggg
aaacagtggaggaggctgtgctccagggagggctgctctaaagagtcccagcgccgagga
tactgctcaagacacctctcaatgaggaccaaggagatggaagcaagtggaggcggccgg
gaacggggtggagccagcagcacagggaccctgacaccatccgacctccgactgagcggt
gggagagcaagctctgagtttgactgggatgagacctcacgggaaagtagtgaggctagc
agccgtggaggagactcccgcccccgtttggtccttccctctctgctcccccaggacctc
tctcgctttgattttgatgagtgtgaggcagcgaccatgctggtctccctcgggggctcc
cgctcaggcacgccatcattctcccctatctccaaccagtcgcccttctcccctacccca
tcaccctcaccctctccgctctttggctttcgccctgccaatttcagcccaattactgct
tctgcctcacttcctccacgccgccatcggcagcttagcggtactaagatgggcacacca
ggggctgagagagagcgccacctgtcagggattgtacccacttttcagaccaacctcact
tttacagtccccatgagccccagcaagaggaagctcgacacacacccaccccctccactg
cctgcagtccaggactaccagaccaaacctgagcaacagcagctggtgggcataggggga
ggggtggtgggagacccaaacgtgggccacagtcctgccgccttcagagtcctttccccc
cagagtcagcccacaaccccctcttcactttcctttccccggccccgtagcgccaccagc
aggccaccatcctctgctgcctccacacctccacccatgctggtctcgcccactcctccc
tccccgctgccccaggaaccctcccctcggcggattgtgccccttcgcgattccccagtc
attgtccgcaacccagatgtccccctggccaaattctctgatggcccgttaggaaggaga
gagaaaagcaggtccagagagcacagccagccccaacatacagctcctccaggcctgcag
gtccctgtccccatcaacggggccaccaccaacggtgcagttctcctgcgcaaccctaca
tccacacttgtcctggtcacctccagctcgtccctgactccagccacagtgggccacact
gccctgtccagcccctccacccctgggtcgatgcccacttcatcgagctcagtcctgtcc
tcctctggttctggaggcagggagagagagaggaaacctgagggacaccaggatgcctct
ggaggggccctgccacagccggtagcatgtcacccaacgcctactgccctgctgccgctt
atattgccagctgagtcgcctcaccctgctccacgcaagcagatcatcatgggacgtcca
gggactgtttggaccaacgtggagcctcggtcggtgccagtgttcccttggcattcactc
gtccctttcctggagcccagccaatcaggagcggctgcccagcctgctgatggccaacag
cttgtcaatcagagcaaagagcctcgttgcgctgtggccctggtgagcgacgggcgaacc
ggtcctccagacctagagaggggttctccatcatgccctcccccgaccaatgataatcct
cctacagacaggggcgtagctgacagcgagacagagagcgatacagatgacccgttctcc
ccgggtgtggccaacgatccagcgccctccactggccccatgaagagacgcacgcagtcc
ctcagcgctctgcccaaggatggagacaggaagagggaaaaggaccacattcgccgtccc
atgaatgcattcatgatcttcagtaaacgccacagagccctggttcaccagcgacacccc
aaccaggacaaccggacagtcagcaagatcctgggggagtggtggtatgctctgggaccc
aacgagaagcagcagtaccacgatctagccttccaggtgaaagaggcccacttcaaagcc
catccagactggaagtggtgcaacaaggaccgcaggaagtcactgtcagagggccgtggg
acaccaaaggagcaacgggagaggagcatgtcagagagcatagatgcccatccagactcc
caggtgctggaggggaaaggaggagtctctggctggcctggggggtcagagcgtagaggg
gggctatttttggggcagcaccctcgtcccagagccttttcccagagtgctgtgcacacc
ctggagcagagggaaagagagggagacctggagaaggaggatgggtcgagtttgtttcgc
caccggcccctgcctcagtccctgtaccagggcggggtcagtgaggatgtgaccagtgat
gaagagcgcatggtcatctgtgaggaagagggggacgatgatgttatggaggattcctgt
cctgaaggctccattgacctcaagtgtaaagagagagtgacggacagtgatgaggacgaa
ccggatggacagcatggcttccagccagtggctcgctcctctctcccctcttcctctccc
tccatgcctcactccaactccacctcagctaaagggaatggaggaggaggaggtggtgaa
gaggggtctgagaggaagagaacgagaggtacagacggaggagaggagggaagcgaagga
ggatccaagagtgaagaaggcagtggaagaggtgggcagagtgtctcctctctctccatc
acaggctcaacatccagcacccaggctccccttgctttggcccagcaggggttgacccag
gtcctcggcaccgcccgcatggctcccactatggtgaccaatgtggtacgacccatcgcc
agcacgcccatccccatcaccagcaagccagtggaaggagccgtcaccctcagctcccac
gcccaggacaagaaagccactctcctgattggaggaggcggacctcagcagctgccaatc
accgcagggggtgggtacctgtcctcatcctcctccccaggtccagtcagtgtaacccct
ttggggggaagcggcctggtcactagcctagttctgggagggtcctttcccgctgcccaa
ccagtgcagatccttacccccgcgcagcctcacgcacaaacccccctacctatcctccaa
ccccagctccatcccactgccgccacctcctctctcacacctgccgccggccccaagcct
ctagcacaggtccagtacatcctgcctactgagagcccctcctcccctcaactcacccac
cagcaaattctctccctgcccaccactgcggccctggccaatggcatgcacacgggggcg
ggaatcagagttgcttcagtcagccctgggaccagagtccaaacccagtcgcctgtcttg
cagagcaagatgttggttcccatggcaacagtgagaacagggtctactcctcctcatcct
tccatttccctggttgctccacctcttcctgtgcagaacggccccacgacaggaaacaag
atcatccagatcgctcccatgcctgtggtccagaccaacattcaccctagcggctcagca
gcagtgcatcctgggagcccctttcctgtttccatggcaacggtgatggcgcccgttgcc
gcgcccccgcagaccgttcttctgacctctccacccaccaggatcacctacgtccagtct
ggcccaggaggcaccacagcaacaccccaacaggccacacccgctccatgcccgacatat
ctcccatcatctctggcaaccctgggtttcaccgccatcgccccggctgggcaaaccctg
gttcagccactcattggtcaaccgccactgttagctccggccccacccctgggctctcca
ggtcaggcctcgggaacagctggtcgtcaggtactaactgccatataccctgcaccaacc
gttgcactggctactggcgtggtctctgtgacaaccatgccgcccgcagtggccacccca
gcccaggacgttataaacccctcctctccgttggcgacaggagtgcagggttcagcggca
gcatcccctcaggctaacgttacaatggatgtgcagccgaaggtggaggtgaagagggag
agccagctggatgaggatggaggacacgggttgccgagctgtgctgtcagcttgtcagtg
gccacctgtatgagtaatgccacagcagtcaaaaaagaggaggacatctgtctgcacatt
aaagaagaaaatctgagagatggacacagcagagagacacgaagtgagatggacagagaa
cgagagagagggatgaaggagaacagtgaaaagaagggaggcagagagacagacagagag
gactacagcatggccgacagcagcaaagaggctggacctcattcccctcctccaccaccc
tcaggtttggacccccctcctcctcctcctgcggaaagagagcccccctcttcctcaaag
aaaaccaagttcagacccccgcctctcaaaaagacacccgactctctcgacaaggtcttg
tcggaaacttactttgaggagcgttttgctgagcttccagagtttaacccagaggaggtc
cttccttcgcccactctgcagagtctggccacctcaccaagagccatcctgggaagctac
cgcaggaagagacgtaactccaccgagctggagctgacagcagaagaccccagctcccct
aggaggaagactcgtcgtctctccagttgcagctcggagcccaacacccccaagagcgcc
gccaagtgtgagggagacatcttcacctttgacagaccaggtacagaaggagaggatctt
ctaggagatttggacagggtcccctactcgtctctgcgtagaactctggatcagcgccgg
accctggtcatgcagctgtttcaggaacacggcttctttccctcagctcaggccaccgct
gccttccaggcacgctactcggacaccttccccaccaaagtgtgtctgcagctgaagatc
cgtgaagtccgtcagaagatcatgcagacggccacgcctggaaccctcgagctcggaggg
tcagccgaagccaacctcgccccgccccacagctcctctttcaatcaatctgcccgggag
gatggaggggcggagcagcaaggagacaaaggccggagccccgaggagccaaaaagcgaa
ggatcctaa
DBGET
integrated database retrieval system
